Factsheet for Os02t0614300-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

plastid 2
nucleus 4
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0176300-00	Rice	mitochondrion	24.92	47.06
Zm00001d017207_P001	Maize	nucleus	84.11	39.94
KXG30667	Sorghum	nucleus	85.36	39.71
Os04t0504500-01	Rice	nucleus	67.91	33.13
TraesCS2D01G357600.1	Wheat	nucleus	66.67	32.67
HORVU2Hr1G087310.1	Barley	nucleus	66.98	32.63
TraesCS2B01G378100.1	Wheat	nucleus	66.98	32.58
Os01t0813300-00	Rice	nucleus	12.15	30.71
Os07t0124700-01	Rice	nucleus	31.15	30.21
GSMUA_Achr2P05880_001	Banana	nucleus	47.98	26.92
KRH24688	Soybean	nucleus	41.43	24.05
VIT_06s0004g01800.t01	Wine grape	nucleus	41.12	24.0
Os06t0657500-02	Rice	nucleus	34.58	23.67
Solyc11g061750.1.1	Tomato	nucleus	38.63	22.63
Os03t0313100-01	Rice	extracellular, nucleus	30.22	22.51
PGSC0003DMT400035354	Potato	nucleus	38.63	22.5
CDY06387	Canola	nucleus	39.25	22.5
Os06t0145700-00	Rice	nucleus	22.43	22.36
AT1G51190.1	Thale cress	nucleus	39.56	22.36
Bra031234.1-P	Field mustard	nucleus	38.63	22.26
Bra018899.1-P	Field mustard	nucleus	38.63	22.18
CDY57915	Canola	nucleus	38.94	22.16
KRH29690	Soybean	nucleus	41.12	22.07
Os01t0899800-01	Rice	nucleus	47.66	22.01
CDY29623	Canola	nucleus	38.32	21.89
CDY35571	Canola	nucleus	38.32	21.85
Os11t0295900-01	Rice	nucleus	38.01	21.82
Bra030451.1-P	Field mustard	nucleus	38.32	21.81
AT3G20840.1	Thale cress	nucleus	38.32	21.43
CDY19597	Canola	nucleus	38.94	21.26
Os09t0423800-01	Rice	nucleus	23.99	21.1
Os04t0653600-01	Rice	nucleus	30.84	20.0
Os08t0442400-01	Rice	nucleus	22.43	17.18
Os05t0536250-00	Rice	nucleus	23.05	17.17
Os12t0126300-00	Rice	nucleus	23.05	16.59
Bra023921.1-P	Field mustard	nucleus	23.68	16.27
CDY68782	Canola	nucleus	16.2	16.05
Os03t0232200-01	Rice	nucleus	30.53	15.26
CDY72154	Canola	nucleus	15.26	14.89
CDY72251	Canola	nucleus	14.95	14.72
Os03t0770700-01	Rice	plastid	0.0	0.0

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	ProteinID:BAD19450.1
ProteinID:BAD19725.1	ProteinID:BAF09338.1	ProteinID:BAS79749.1	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	EnsemblPlantsGene:Os02g0614300
EnsemblPlants:Os02t0614300-01	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF48
UniProt:Q6K5Y1	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000037587D	SEG:seg	:

Description

PLETHORA 3Similar to ANT-like protein. (Os02t0614300-01)

Coordinates

chr2:+:24264204..24266297

Molecular Weight (calculated)

33684.9 Da

IEP (calculated)

7.877

GRAVY (calculated)

-0.370

Length

321 amino acids

Sequence
(BLAST)

001: MTRQEYIAYL RRNSSGFSRG ASKYRGVTRH HQHGRWQARI GRVAGNKDLY LGTFSTEEEA AEAYDIAAIK FRGLNAVTNF DMSRYDVKSI LESSTLPVGG
101: AARRLKEAAD HAEAAGATIW RAADMDGAGV ISGLADVGMG AYAASYHHHH HHGWPTIAFQ QPPPLAVHYP YGQAPAAPSR GWCKPEQDAA VAAAAHSLQD
201: LQQLHLGSAA AHNFFQASSS STVYNGGGGG YQGLGGNAFL MPASTVVADQ GHSSTATNHG NTCSYGNEEQ GKLIGYDAMA MASGAAGGGY QLSQGSASTV
301: SIARANGYSA NWSSPFNGAM G

Best Arabidopsis Sequence Match ( AT1G51190.1 )
(BLAST)

001: MNSNNWLAFP LSPTHSSLPP HIHSSQNSHF NLGLVNDNID NPFQNQGWNM INPHGGGGEG GEVPKVADFL GVSKSGDHHT DHNLVPYNDI HQTNASDYYF
101: QTNSLLPTVV TCASNAPNNY ELQESAHNLQ SLTLSMGSTG AAAAEVATVK ASPAETSADN SSSTTNTSGG AIVEATPRRT LETFGQRTSI YRGVTRHRWT
201: GRYEAHLWDN SCRREGQSRK GRQVYLGGYD KEEKAARAYD LAALKYWGPS TTTNFPITNY EKEVEEMKNM TRQEFVASIR RKSSGFSRGA SMYRGVTRHH
301: QHGRWQARIG RVAGNKDLYL GTFSTEEEAA EAYDIAAIKF RGLNAVTNFE INRYDVKAIL ESNTLPIGGG AAKRLKEAQA LESSRKREEM IALGSNFHQY
401: GAASGSSSVA SSSRLQLQPY PLSIQQPFEH LHHHQPLLTL QNNNDISQYH DSFSYIQTQL HLHQQQTNNY LQSSSHTSQL YNAYLQSNPG LLHGFVSDNN
501: NTSGFLGNNG IGIGSSSTVG SSAEEEFPAV KVDYDMPPSG GATGYGGWNS GESAQGSNPG GVFTMWNE

Arabidopsis Description

PLT2AP2-like ethylene-responsive transcription factor PLT2 [Source:UniProtKB/Swiss-Prot;Acc:Q5YGP7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.