Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra035137.1-P | Field mustard | nucleus | 96.82 | 98.7 |
| CDX88560 | Canola | nucleus | 95.22 | 96.76 |
| AT1G79700.2 | Thale cress | nucleus | 77.07 | 77.32 |
| CDY33356 | Canola | nucleus | 45.86 | 75.0 |
| CDY35066 | Canola | nucleus | 72.29 | 68.79 |
| KRH47304 | Soybean | nucleus | 60.51 | 65.52 |
| KRH44591 | Soybean | plastid | 60.51 | 60.7 |
| Solyc06g068570.2.1 | Tomato | nucleus | 58.6 | 58.41 |
| VIT_09s0018g01650.t01 | Wine grape | plastid | 61.15 | 53.19 |
| Solyc03g117720.2.1 | Tomato | nucleus, plastid | 61.47 | 52.02 |
| GSMUA_Achr5P04670_001 | Banana | nucleus | 59.55 | 51.94 |
| Os09t0423800-01 | Rice | nucleus | 57.32 | 49.32 |
| TraesCS6B01G153800.1 | Wheat | nucleus | 50.64 | 47.18 |
| TraesCS5D01G229400.1 | Wheat | nucleus | 58.92 | 46.72 |
| TraesCS5B01G220400.2 | Wheat | nucleus | 58.92 | 46.6 |
| TraesCS5A01G221600.1 | Wheat | nucleus | 58.6 | 46.46 |
| OQU89519 | Sorghum | plastid | 57.64 | 45.82 |
| Os08t0442400-01 | Rice | nucleus | 58.6 | 43.91 |
| Zm00001d020540_P002 | Maize | plastid | 56.05 | 42.82 |
| TraesCS6A01G125700.1 | Wheat | nucleus | 47.45 | 42.69 |
| Zm00001d032144_P001 | Maize | nucleus | 48.41 | 37.53 |
| CDX78230 | Canola | plastid | 48.73 | 36.87 |
| CDX73488 | Canola | nucleus | 48.41 | 36.8 |
| CDX67595 | Canola | plastid | 48.41 | 36.54 |
| OQU80549 | Sorghum | nucleus | 50.64 | 36.14 |
| CDX72655 | Canola | endoplasmic reticulum, golgi | 37.58 | 35.33 |
| CDY18032 | Canola | nucleus | 31.85 | 34.48 |
| CDY68782 | Canola | nucleus | 30.25 | 29.32 |
| CDY68823 | Canola | nucleus | 31.53 | 29.2 |
| CDX78387 | Canola | nucleus | 36.94 | 28.86 |
| CDY72251 | Canola | nucleus | 29.94 | 28.83 |
| CDY72154 | Canola | nucleus | 29.94 | 28.57 |
| CDX97022 | Canola | nucleus | 36.62 | 28.12 |
| CDY16924 | Canola | nucleus | 32.17 | 26.72 |
| CDY14577 | Canola | nucleus | 38.53 | 26.65 |
| CDY49856 | Canola | nucleus | 36.94 | 25.38 |
| CDX82142 | Canola | nucleus | 36.94 | 25.38 |
| CDY42263 | Canola | nucleus | 40.76 | 23.32 |
| CDY55941 | Canola | nucleus | 41.4 | 23.3 |
| CDY08784 | Canola | nucleus | 37.9 | 23.29 |
| CDY47943 | Canola | nucleus | 40.45 | 22.88 |
| CDX75673 | Canola | nucleus | 39.81 | 22.81 |
| CDX85454 | Canola | nucleus | 40.76 | 22.5 |
| CDX69324 | Canola | nucleus | 39.49 | 22.34 |
| CDX69826 | Canola | nucleus | 39.49 | 22.14 |
| CDY40102 | Canola | nucleus | 39.17 | 22.08 |
| CDY50260 | Canola | nucleus | 38.22 | 21.43 |
| CDY29623 | Canola | nucleus | 38.22 | 21.35 |
| CDY44027 | Canola | nucleus | 37.9 | 21.29 |
| CDY57915 | Canola | nucleus | 38.22 | 21.28 |
| CDY06387 | Canola | nucleus | 37.9 | 21.25 |
| CDX85757 | Canola | nucleus | 39.17 | 21.24 |
| CDY35571 | Canola | nucleus | 37.9 | 21.14 |
| CDY19597 | Canola | nucleus | 37.9 | 20.24 |
| CDY71263 | Canola | nucleus | 11.15 | 10.74 |
Protein Annotations
| MapMan:15.5.7.3 | Gene3D:3.30.730.10 | GO:A0A078DDR3 | InterPro:AP2-like_transcript_factor | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| EnsemblPlants:CDX87360 | ProteinID:CDX87360 | ProteinID:CDX87360.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00146328001 | InterPro:IPR001471 |
| InterPro:IPR036955 | PFAM:PF00847 | PFscan:PS51032 | PANTHER:PTHR32467 | PANTHER:PTHR32467:SF20 | SMART:SM00380 |
| SUPFAM:SSF54171 | UniParc:UPI0004EF1FDF | SEG:seg | : | : | : |
Description
BnaA07g35130D
Coordinates
chrLK031850:+:275611..278667
Molecular Weight (calculated)
35636.2 Da
IEP (calculated)
8.913
GRAVY (calculated)
-0.875
Length
314 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKLSQRNKK IIEDQTIDKT ATASASPVVF KCKRKRKSPP QNAPPQRSSS HRGVTSRHRW TGRYEAHLWD KNSWNETQTK KGRQGLNMVL WIGAYDEEEA
101: AARAYDLAAL KYWGRDTLLN FPLSTYEGDV KEMESHSKEE YIGSLRRKSS GFSRGVSKYR GVARHHHNGR WEARIGRVFG NKYLYLGTYA TQEEAARAYD
201: IAAIEYRGLN AVTNFDVSRY LDLPATKKPN AAASPESPND QTSSDDNNFT KTEVITEPST PPEAIQSRRS FPDDIQTYFE CQDSGKLATE EDVIFGGFNS
301: FISPGLCNEF DYWS
101: AARAYDLAAL KYWGRDTLLN FPLSTYEGDV KEMESHSKEE YIGSLRRKSS GFSRGVSKYR GVARHHHNGR WEARIGRVFG NKYLYLGTYA TQEEAARAYD
201: IAAIEYRGLN AVTNFDVSRY LDLPATKKPN AAASPESPND QTSSDDNNFT KTEVITEPST PPEAIQSRRS FPDDIQTYFE CQDSGKLATE EDVIFGGFNS
301: FISPGLCNEF DYWS
001: MAKVSGRSKK TIVDDEISDK TASASESASI ALTSKRKRKS PPRNAPLQRS SPYRGVTRHR WTGRYEAHLW DKNSWNDTQT KKGRQVYLGA YDEEEAAARA
101: YDLAALKYWG RDTLLNFPLP SYDEDVKEME GQSKEEYIGS LRRKSSGFSR GVSKYRGVAR HHHNGRWEAR IGRVFGNKYL YLGTYATQEE AAIAYDIAAI
201: EYRGLNAVTN FDVSRYLNPN AAADKADSDS KPIRSPSREP ESSDDNKSPK SEEVIEPSTS PEVIPTRRSF PDDIQTYFGC QDSGKLATEE DVIFDCFNSY
301: INPGFYNEFD YGP
101: YDLAALKYWG RDTLLNFPLP SYDEDVKEME GQSKEEYIGS LRRKSSGFSR GVSKYRGVAR HHHNGRWEAR IGRVFGNKYL YLGTYATQEE AAIAYDIAAI
201: EYRGLNAVTN FDVSRYLNPN AAADKADSDS KPIRSPSREP ESSDDNKSPK SEEVIEPSTS PEVIPTRRSF PDDIQTYFGC QDSGKLATEE DVIFDCFNSY
301: INPGFYNEFD YGP
Arabidopsis Description
Integrase-type DNA-binding superfamily protein [Source:UniProtKB/TrEMBL;Acc:A8MQS2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.