CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P26510_001	Banana	nucleus	55.39	54.73
PGSC0003DMT400055210	Potato	nucleus	44.91	52.45
Bra017852.1-P	Field mustard	nucleus	85.03	51.08
CDX75673	Canola	nucleus	82.34	50.18
CDX69324	Canola	nucleus	82.93	49.91
Os07t0124700-01	Rice	nucleus	48.8	49.24
CDY50260	Canola	nucleus	82.34	49.11
AT4G37750.1	Thale cress	nucleus	81.44	49.01
CDY33356	Canola	nucleus	28.14	48.96
CDY44027	Canola	nucleus	81.14	48.48
CDY18032	Canola	nucleus	40.72	46.9
CDX88560	Canola	nucleus	36.23	39.16
CDX78387	Canola	nucleus	46.41	38.56
CDY72251	Canola	nucleus	37.43	38.34
CDY68823	Canola	nucleus	38.62	38.05
CDY72154	Canola	nucleus	37.43	37.99
CDY68782	Canola	nucleus	36.53	37.65
CDX87360	Canola	nucleus	35.33	37.58
CDY35066	Canola	nucleus	36.83	37.27
CDX97022	Canola	nucleus	45.21	36.92
CDX82142	Canola	nucleus	48.5	35.45
CDY49856	Canola	nucleus	48.2	35.23
CDY16924	Canola	nucleus	38.62	34.13
CDY14577	Canola	nucleus	46.11	33.92
GSMUA_Achr3P15150_001	Banana	nucleus	55.09	33.39
GSMUA_Achr3P30690_001	Banana	nucleus	58.08	33.28
TraesCS2B01G268100.2	Wheat	nucleus	59.28	33.0
TraesCS2D01G256600.2	Wheat	nucleus	58.98	32.83
TraesCS2A01G267600.2	Wheat	nucleus	58.98	32.78
KRH77164	Soybean	nucleus	59.58	32.36
Zm00001d007840_P001	Maize	nucleus	58.08	32.33
KRH28322	Soybean	nucleus	58.98	32.19
GSMUA_Achr7P27500_001	Banana	nucleus	58.98	31.98
Solyc02g092050.2.1	Tomato	nucleus	61.38	31.73
KRH58159	Soybean	nucleus	63.17	31.73
Zm00001d018731_P001	Maize	nucleus	57.48	31.32
CDX73488	Canola	nucleus	38.32	30.99
KRH04380	Soybean	nucleus	63.17	30.85
VIT_07s0151g00440.t01	Wine grape	nucleus	62.57	30.83
CDX78230	Canola	plastid	38.02	30.6
CDY42263	Canola	nucleus	50.3	30.6
CDY47943	Canola	nucleus	50.6	30.45
CDX67595	Canola	plastid	37.72	30.29
CDY29623	Canola	nucleus	50.9	30.25
CDY08784	Canola	nucleus	45.81	29.94
TraesCS5D01G415500.1	Wheat	nucleus	55.69	29.71
CDY06387	Canola	nucleus	49.7	29.64
TraesCS5A01G405400.1	Wheat	nucleus	55.69	29.57
CDY35571	Canola	nucleus	49.7	29.48
TraesCS5B01G410200.1	Wheat	nucleus	55.39	29.46
EER93382	Sorghum	nucleus	56.59	29.17
CDY57915	Canola	nucleus	49.1	29.08
CDX85454	Canola	nucleus	49.1	28.82
KXG34322	Sorghum	nucleus	58.68	28.78
HORVU5Hr1G098450.2	Barley	nucleus	54.19	28.68
Zm00001d034204_P001	Maize	nucleus	57.19	28.55
CDY55941	Canola	nucleus	47.6	28.49
CDY40102	Canola	nucleus	47.01	28.19
CDY19597	Canola	nucleus	49.1	27.89
CDX69826	Canola	nucleus	46.71	27.86
CDX85757	Canola	nucleus	46.71	26.94
CDY71263	Canola	nucleus	17.66	18.1

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	GO:A0A078C798	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
EnsemblPlants:CDX72655	ProteinID:CDX72655	ProteinID:CDX72655.1	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00100217001	InterPro:IPR001471
InterPro:IPR036955	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF47
SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI0004EE033D	SEG:seg	:	:

Description

BnaC07g46770D

Coordinates

chrLK031796:+:2422581..2424192

Molecular Weight (calculated)

38023.0 Da

IEP (calculated)

9.925

GRAVY (calculated)

-0.516

Length

334 amino acids

Sequence
(BLAST)

001: MCLDPFVDFC IVLSVYRFVF VSLFSPKKKN CILLFFCPSN ETYVYSRKEK RLISFGQRTS QYRGVTRHRW TGRYEAHLWD NSFKKEGHSR KGRQVYLGGY
101: DMEEKAARAY DLAALKYWGP STHTNFSVEN YQKEIEDMKN MTRQEYVAHL RRKSSGFSRG ASIYRGVTRH HQHGRWQARI GRVAGNKDLY LGTFGTQEEA
201: AEAYDVAAIK FRGTNAVTNF DISRYDVDRI MASNTLLSGE LARRNINSIV VRNNNNEETA VNAAVDGGSN KEVNSPERVL SFPAIFALPQ VGQKMFGANM
301: VGNMNSWTTN PNAELKAVSH TLPQMPVFAA WADS

Best Arabidopsis Sequence Match ( AT4G37750.1 )
(BLAST)

001: MKSFCDNDDN NHSNTTNLLG FSLSSNMMKM GGRGGREAIY SSSTSSAATS SSSVPPQLVV GDNTSNFGVC YGSNPNGGIY SHMSVMPLRS DGSLCLMEAL
101: NRSSHSNHHQ DSSPKVEDFF GTHHNNTSHK EAMDLSLDSL FYNTTHEPNT TTNFQEFFSF PQTRNHEEET RNYGNDPSLT HGGSFNVGVY GEFQQSLSLS
201: MSPGSQSSCI TGSHHHQQNQ NQNHQSQNHQ QISEALVETS VGFETTTMAA AKKKRGQEDV VVVGQKQIVH RKSIDTFGQR TSQYRGVTRH RWTGRYEAHL
301: WDNSFKKEGH SRKGRQVYLG GYDMEEKAAR AYDLAALKYW GPSTHTNFSA ENYQKEIEDM KNMTRQEYVA HLRRKSSGFS RGASIYRGVT RHHQHGRWQA
401: RIGRVAGNKD LYLGTFGTQE EAAEAYDVAA IKFRGTNAVT NFDITRYDVD RIMSSNTLLS GELARRNNNS IVVRNTEDQT ALNAVVEGGS NKEVSTPERL
501: LSFPAIFALP QVNQKMFGSN MGGNMSPWTS NPNAELKTVA LTLPQMPVFA AWADS

Arabidopsis Description

ANTAP2-like ethylene-responsive transcription factor ANT [Source:UniProtKB/Swiss-Prot;Acc:Q38914]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.