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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os07t0124700-01 Rice nucleus 59.79 51.66
GSMUA_Achr8P26510_001 Banana nucleus 56.29 47.63
PGSC0003DMT400041758 Potato nucleus 42.31 46.36
CDX72655 Canola endoplasmic reticulum, golgi 52.45 44.91
Solyc02g092050.2.1 Tomato nucleus 97.9 43.34
PGSC0003DMT400035807 Potato nucleus 44.41 39.2
PGSC0003DMT400087745 Potato nucleus 34.27 33.33
GSMUA_Achr3P30690_001 Banana nucleus 62.24 30.53
PGSC0003DMT400012588 Potato nucleus 66.78 29.25
VIT_07s0151g00440.t01 Wine grape nucleus 68.53 28.91
KRH77164 Soybean nucleus 61.89 28.78
KRH28322 Soybean nucleus 61.54 28.76
GSMUA_Achr7P27500_001 Banana nucleus 61.54 28.57
TraesCS2B01G268100.2 Wheat nucleus 59.79 28.5
GSMUA_Achr3P15150_001 Banana nucleus 54.9 28.49
TraesCS2A01G267600.2 Wheat nucleus 59.79 28.45
TraesCS2D01G256600.2 Wheat nucleus 59.44 28.33
KRH58159 Soybean nucleus 64.34 27.67
Zm00001d018731_P001 Maize nucleus 58.74 27.41
CDX75673 Canola nucleus 52.1 27.19
Bra011782.1-P Field mustard nucleus 51.75 27.16
AT4G37750.1 Thale cress nucleus 52.45 27.03
KRH04380 Soybean nucleus 63.99 26.75
CDX69324 Canola nucleus 51.75 26.67
Zm00001d007840_P001 Maize nucleus 55.94 26.67
Bra017852.1-P Field mustard nucleus 51.4 26.44
PGSC0003DMT400041881 Potato nucleus 47.2 26.37
Bra010610.1-P Field mustard nucleus 50.7 26.22
CDY44027 Canola nucleus 50.7 25.94
CDY50260 Canola nucleus 50.7 25.89
TraesCS5D01G415500.1 Wheat nucleus 55.94 25.56
KXG34322 Sorghum nucleus 60.84 25.55
TraesCS5B01G410200.1 Wheat nucleus 55.59 25.32
TraesCS5A01G405400.1 Wheat nucleus 55.59 25.28
EER93382 Sorghum nucleus 56.64 25.0
HORVU5Hr1G098450.2 Barley nucleus 54.55 24.72
PGSC0003DMT400037835 Potato nucleus 44.41 24.33
PGSC0003DMT400070735 Potato nucleus 36.36 23.96
Zm00001d034204_P001 Maize nucleus 55.94 23.92
PGSC0003DMT400035354 Potato nucleus 43.71 22.69
PGSC0003DMT400006170 Potato nucleus 32.17 22.66
CDY71263 Canola nucleus 1.4 1.23
Protein Annotations
MapMan:15.5.7.3Gene3D:3.30.730.10InterPro:AP2-like_transcript_factorInterPro:AP2/ERF_domInterPro:AP2/ERF_dom_sfncoils:Coil
InterPro:DNA-bd_dom_sfGO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0003700GO:GO:0005488
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006351
GO:GO:0006355GO:GO:0007275GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
GO:GO:0010492GO:GO:0019748GO:GO:0019760GO:GO:0042127GO:GO:0043565InterPro:IPR001471
InterPro:IPR036955UniProt:M1BXJ9PFAM:PF00847EnsemblPlantsGene:PGSC0003DMG401021429PGSC:PGSC0003DMG401021429EnsemblPlants:PGSC0003DMT400055210
PRINTS:PR00367PFscan:PS51032PANTHER:PTHR32467PANTHER:PTHR32467:SF47SMART:SM00380SUPFAM:SSF54171
UniParc:UPI00029544E8SEG:seg::::
Description
AP2 domain-containing transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG401021429]
Coordinates
chr2:-:42482926..42484856
Molecular Weight (calculated)
31874.3 Da
IEP (calculated)
7.845
GRAVY (calculated)
-0.606
Length
286 amino acids
Sequence
(BLAST)
001: MEDKAARSYD LAALKYWGPS THINFPLENY QQELEEMKNM TRQEYVAHLR RKSSGFSRGA SMYRGVTRHH QHGRWQARIG RVAGNKDLYL GTFSTQEEAA
101: EAYDIAAIKF RGVNAVTNFD ISRYDVERIM ASNTLLAGDL ARRKKETEIS KEICNQNLIA NASHQGEVNI QNKEENGNAV DWTMSLYQSS SPGIDTNTMS
201: STILQGQMDE SARINTHLSN DSSLVTSLGS SREVSPAKNN GHLMHNFAMP QSAPKLISSP ATNITSWISS AQLRPNVPVF AAWTDA
Best Arabidopsis Sequence Match ( AT4G37750.1 )
(BLAST)
001: MKSFCDNDDN NHSNTTNLLG FSLSSNMMKM GGRGGREAIY SSSTSSAATS SSSVPPQLVV GDNTSNFGVC YGSNPNGGIY SHMSVMPLRS DGSLCLMEAL
101: NRSSHSNHHQ DSSPKVEDFF GTHHNNTSHK EAMDLSLDSL FYNTTHEPNT TTNFQEFFSF PQTRNHEEET RNYGNDPSLT HGGSFNVGVY GEFQQSLSLS
201: MSPGSQSSCI TGSHHHQQNQ NQNHQSQNHQ QISEALVETS VGFETTTMAA AKKKRGQEDV VVVGQKQIVH RKSIDTFGQR TSQYRGVTRH RWTGRYEAHL
301: WDNSFKKEGH SRKGRQVYLG GYDMEEKAAR AYDLAALKYW GPSTHTNFSA ENYQKEIEDM KNMTRQEYVA HLRRKSSGFS RGASIYRGVT RHHQHGRWQA
401: RIGRVAGNKD LYLGTFGTQE EAAEAYDVAA IKFRGTNAVT NFDITRYDVD RIMSSNTLLS GELARRNNNS IVVRNTEDQT ALNAVVEGGS NKEVSTPERL
501: LSFPAIFALP QVNQKMFGSN MGGNMSPWTS NPNAELKTVA LTLPQMPVFA AWADS
Arabidopsis Description
ANTAP2-like ethylene-responsive transcription factor ANT [Source:UniProtKB/Swiss-Prot;Acc:Q38914]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.