Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Os07t0124700-01 | Rice | nucleus | 59.79 | 51.66 |
GSMUA_Achr8P26510_001 | Banana | nucleus | 56.29 | 47.63 |
PGSC0003DMT400041758 | Potato | nucleus | 42.31 | 46.36 |
CDX72655 | Canola | endoplasmic reticulum, golgi | 52.45 | 44.91 |
Solyc02g092050.2.1 | Tomato | nucleus | 97.9 | 43.34 |
PGSC0003DMT400035807 | Potato | nucleus | 44.41 | 39.2 |
PGSC0003DMT400087745 | Potato | nucleus | 34.27 | 33.33 |
GSMUA_Achr3P30690_001 | Banana | nucleus | 62.24 | 30.53 |
PGSC0003DMT400012588 | Potato | nucleus | 66.78 | 29.25 |
VIT_07s0151g00440.t01 | Wine grape | nucleus | 68.53 | 28.91 |
KRH77164 | Soybean | nucleus | 61.89 | 28.78 |
KRH28322 | Soybean | nucleus | 61.54 | 28.76 |
GSMUA_Achr7P27500_001 | Banana | nucleus | 61.54 | 28.57 |
TraesCS2B01G268100.2 | Wheat | nucleus | 59.79 | 28.5 |
GSMUA_Achr3P15150_001 | Banana | nucleus | 54.9 | 28.49 |
TraesCS2A01G267600.2 | Wheat | nucleus | 59.79 | 28.45 |
TraesCS2D01G256600.2 | Wheat | nucleus | 59.44 | 28.33 |
KRH58159 | Soybean | nucleus | 64.34 | 27.67 |
Zm00001d018731_P001 | Maize | nucleus | 58.74 | 27.41 |
CDX75673 | Canola | nucleus | 52.1 | 27.19 |
Bra011782.1-P | Field mustard | nucleus | 51.75 | 27.16 |
AT4G37750.1 | Thale cress | nucleus | 52.45 | 27.03 |
KRH04380 | Soybean | nucleus | 63.99 | 26.75 |
CDX69324 | Canola | nucleus | 51.75 | 26.67 |
Zm00001d007840_P001 | Maize | nucleus | 55.94 | 26.67 |
Bra017852.1-P | Field mustard | nucleus | 51.4 | 26.44 |
PGSC0003DMT400041881 | Potato | nucleus | 47.2 | 26.37 |
Bra010610.1-P | Field mustard | nucleus | 50.7 | 26.22 |
CDY44027 | Canola | nucleus | 50.7 | 25.94 |
CDY50260 | Canola | nucleus | 50.7 | 25.89 |
TraesCS5D01G415500.1 | Wheat | nucleus | 55.94 | 25.56 |
KXG34322 | Sorghum | nucleus | 60.84 | 25.55 |
TraesCS5B01G410200.1 | Wheat | nucleus | 55.59 | 25.32 |
TraesCS5A01G405400.1 | Wheat | nucleus | 55.59 | 25.28 |
EER93382 | Sorghum | nucleus | 56.64 | 25.0 |
HORVU5Hr1G098450.2 | Barley | nucleus | 54.55 | 24.72 |
PGSC0003DMT400037835 | Potato | nucleus | 44.41 | 24.33 |
PGSC0003DMT400070735 | Potato | nucleus | 36.36 | 23.96 |
Zm00001d034204_P001 | Maize | nucleus | 55.94 | 23.92 |
PGSC0003DMT400035354 | Potato | nucleus | 43.71 | 22.69 |
PGSC0003DMT400006170 | Potato | nucleus | 32.17 | 22.66 |
CDY71263 | Canola | nucleus | 1.4 | 1.23 |
Protein Annotations
MapMan:15.5.7.3 | Gene3D:3.30.730.10 | InterPro:AP2-like_transcript_factor | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | ncoils:Coil |
InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
GO:GO:0010492 | GO:GO:0019748 | GO:GO:0019760 | GO:GO:0042127 | GO:GO:0043565 | InterPro:IPR001471 |
InterPro:IPR036955 | UniProt:M1BXJ9 | PFAM:PF00847 | EnsemblPlantsGene:PGSC0003DMG401021429 | PGSC:PGSC0003DMG401021429 | EnsemblPlants:PGSC0003DMT400055210 |
PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR32467 | PANTHER:PTHR32467:SF47 | SMART:SM00380 | SUPFAM:SSF54171 |
UniParc:UPI00029544E8 | SEG:seg | : | : | : | : |
Description
AP2 domain-containing transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG401021429]
Coordinates
chr2:-:42482926..42484856
Molecular Weight (calculated)
31874.3 Da
IEP (calculated)
7.845
GRAVY (calculated)
-0.606
Length
286 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDKAARSYD LAALKYWGPS THINFPLENY QQELEEMKNM TRQEYVAHLR RKSSGFSRGA SMYRGVTRHH QHGRWQARIG RVAGNKDLYL GTFSTQEEAA
101: EAYDIAAIKF RGVNAVTNFD ISRYDVERIM ASNTLLAGDL ARRKKETEIS KEICNQNLIA NASHQGEVNI QNKEENGNAV DWTMSLYQSS SPGIDTNTMS
201: STILQGQMDE SARINTHLSN DSSLVTSLGS SREVSPAKNN GHLMHNFAMP QSAPKLISSP ATNITSWISS AQLRPNVPVF AAWTDA
101: EAYDIAAIKF RGVNAVTNFD ISRYDVERIM ASNTLLAGDL ARRKKETEIS KEICNQNLIA NASHQGEVNI QNKEENGNAV DWTMSLYQSS SPGIDTNTMS
201: STILQGQMDE SARINTHLSN DSSLVTSLGS SREVSPAKNN GHLMHNFAMP QSAPKLISSP ATNITSWISS AQLRPNVPVF AAWTDA
001: MKSFCDNDDN NHSNTTNLLG FSLSSNMMKM GGRGGREAIY SSSTSSAATS SSSVPPQLVV GDNTSNFGVC YGSNPNGGIY SHMSVMPLRS DGSLCLMEAL
101: NRSSHSNHHQ DSSPKVEDFF GTHHNNTSHK EAMDLSLDSL FYNTTHEPNT TTNFQEFFSF PQTRNHEEET RNYGNDPSLT HGGSFNVGVY GEFQQSLSLS
201: MSPGSQSSCI TGSHHHQQNQ NQNHQSQNHQ QISEALVETS VGFETTTMAA AKKKRGQEDV VVVGQKQIVH RKSIDTFGQR TSQYRGVTRH RWTGRYEAHL
301: WDNSFKKEGH SRKGRQVYLG GYDMEEKAAR AYDLAALKYW GPSTHTNFSA ENYQKEIEDM KNMTRQEYVA HLRRKSSGFS RGASIYRGVT RHHQHGRWQA
401: RIGRVAGNKD LYLGTFGTQE EAAEAYDVAA IKFRGTNAVT NFDITRYDVD RIMSSNTLLS GELARRNNNS IVVRNTEDQT ALNAVVEGGS NKEVSTPERL
501: LSFPAIFALP QVNQKMFGSN MGGNMSPWTS NPNAELKTVA LTLPQMPVFA AWADS
101: NRSSHSNHHQ DSSPKVEDFF GTHHNNTSHK EAMDLSLDSL FYNTTHEPNT TTNFQEFFSF PQTRNHEEET RNYGNDPSLT HGGSFNVGVY GEFQQSLSLS
201: MSPGSQSSCI TGSHHHQQNQ NQNHQSQNHQ QISEALVETS VGFETTTMAA AKKKRGQEDV VVVGQKQIVH RKSIDTFGQR TSQYRGVTRH RWTGRYEAHL
301: WDNSFKKEGH SRKGRQVYLG GYDMEEKAAR AYDLAALKYW GPSTHTNFSA ENYQKEIEDM KNMTRQEYVA HLRRKSSGFS RGASIYRGVT RHHQHGRWQA
401: RIGRVAGNKD LYLGTFGTQE EAAEAYDVAA IKFRGTNAVT NFDITRYDVD RIMSSNTLLS GELARRNNNS IVVRNTEDQT ALNAVVEGGS NKEVSTPERL
501: LSFPAIFALP QVNQKMFGSN MGGNMSPWTS NPNAELKTVA LTLPQMPVFA AWADS
Arabidopsis Description
ANTAP2-like ethylene-responsive transcription factor ANT [Source:UniProtKB/Swiss-Prot;Acc:Q38914]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.