Factsheet for VIT_07s0151g00440.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P26510_001	Banana	nucleus	35.4	71.01
PGSC0003DMT400055210	Potato	nucleus	28.91	68.53
VIT_18s0001g08610.t01	Wine grape	nucleus	67.55	67.95
Solyc02g092050.2.1	Tomato	nucleus	61.8	64.86
GSMUA_Achr3P30690_001	Banana	nucleus	54.87	63.81
CDX72655	Canola	endoplasmic reticulum, golgi	30.83	62.57
GSMUA_Achr3P15150_001	Banana	nucleus	50.74	62.43
KRH58159	Soybean	nucleus	61.21	62.41
KRH28322	Soybean	nucleus	55.31	61.27
GSMUA_Achr7P27500_001	Banana	nucleus	55.46	61.04
Os07t0124700-01	Rice	nucleus	29.35	60.12
KRH04380	Soybean	nucleus	60.62	60.09
KRH77164	Soybean	nucleus	53.24	58.7
AT4G37750.1	Thale cress	nucleus	45.72	55.86
CDX75673	Canola	nucleus	44.99	55.66
Bra011782.1-P	Field mustard	nucleus	44.69	55.6
Bra017852.1-P	Field mustard	nucleus	44.84	54.68
CDX69324	Canola	nucleus	44.4	54.23
CDY50260	Canola	nucleus	43.95	53.21
CDY44027	Canola	nucleus	43.66	52.95
Bra010610.1-P	Field mustard	nucleus	42.77	52.44
TraesCS2B01G268100.2	Wheat	nucleus	46.17	52.17
TraesCS2D01G256600.2	Wheat	nucleus	45.87	51.83
TraesCS2A01G267600.2	Wheat	nucleus	45.72	51.58
Zm00001d007840_P001	Maize	nucleus	45.43	51.33
Zm00001d018731_P001	Maize	nucleus	45.72	50.57
TraesCS5D01G415500.1	Wheat	nucleus	45.13	48.88
EER93382	Sorghum	nucleus	46.31	48.46
Zm00001d034204_P001	Maize	nucleus	47.79	48.43
TraesCS5B01G410200.1	Wheat	nucleus	44.84	48.41
TraesCS5A01G405400.1	Wheat	nucleus	44.69	48.17
HORVU5Hr1G098450.2	Barley	nucleus	44.25	47.54
KXG34322	Sorghum	nucleus	46.9	46.7
CDY71263	Canola	nucleus	22.12	46.01
VIT_09s0002g01370.t01	Wine grape	nucleus	33.33	41.93
VIT_11s0052g00840.t01	Wine grape	nucleus	30.97	41.92
VIT_00s0772g00020.t01	Wine grape	nucleus	28.17	41.7
VIT_04s0023g00950.t01	Wine grape	nucleus	24.93	40.72
VIT_11s0037g00870.t01	Wine grape	plastid	20.35	39.77
VIT_00s1291g00010.t01	Wine grape	nucleus	29.79	39.38
VIT_01s0026g01690.t01	Wine grape	nucleus	19.32	39.34
VIT_06s0004g01800.t01	Wine grape	nucleus	31.86	39.27
VIT_09s0018g01650.t01	Wine grape	plastid	20.65	38.78
VIT_13s0047g00340.t01	Wine grape	plastid	18.73	34.23
VIT_14s0108g00050.t01	Wine grape	nucleus	19.91	33.42

Protein Annotations

EntrezGene:100257805	wikigene:100257805	MapMan:15.5.7.3	Gene3D:3.30.730.10	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	ProteinID:CCB62905	ProteinID:CCB62905.1	ncoils:Coil	InterPro:DNA-bd_dom_sf	UniProt:F6I7I7
EMBL:FN596793	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016491	GO:GO:0055114	InterPro:IPR001471	InterPro:IPR036955	EntrezGene:LOC100257805
wikigene:LOC100257805	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF47
SMART:SM00380	SUPFAM:SSF54171	TIGR:TC55107	UniParc:UPI0002108F08	ArrayExpress:VIT_07s0151g00440	EnsemblPlantsGene:VIT_07s0151g00440
EnsemblPlants:VIT_07s0151g00440.t01	unigene:Vvi.14965	RefSeq:XP_002263597	RefSeq:XP_002263597.2	SEG:seg	:

Description

No Description!

Coordinates

chr7_random:+:914799..918602

Molecular Weight (calculated)

75243.9 Da

IEP (calculated)

7.005

GRAVY (calculated)

-0.727

Length

678 amino acids

Sequence
(BLAST)

001: MKSLSNDSNN NHNNSWLGFS LSPHMNMDVP SDPHHHHQTQ PPPTLTAVST PVSTGFFPSP SHLNYSGIYY GVEGENGGFY SPLSVMPLKS DGSLCIMEAL
101: SRSQPQGMVP TSTPKLEDFF GGATMGTHHY ESNDREAMAL SLDSMYYHQN PENEPNSQNC LNQLQSNSRQ QQQQLIQLQQ YPYVSGFRSH EMFHTPLVEE
201: TKETQLAADG NLQLPNMADT GLPGMKNWVS RNYPTNESLE HKMIGCMSDN GGESGSMSTM GYGDLQSLSL SMSPGSQSSC VTGSQQISPT VTECVAMDTK
301: KRGPDKVDQK QIVHRKSLDT FGQRTSQYRG VTRHRWTGRY EAHLWDNSCK KEGQSRKGRQ GGYDMEEKAA RAYDLAALKY WGPSTHINFP LENYQQELEN
401: MKNMTRQEYV AHLRRKSSGF SRGASMYRGV TRHHQHGRWQ ARIGRVAGNK DLYLGTFSTQ EEAAEAYDIA AIKFRGVNAV TNFDITRYDV ERIMASSNLL
501: AGELAKRNKD MESTSEAKNL NPSVHTSSGE AILSQENNQS ESGWKMVLYQ SSQQSNSCLK QLDQKPLSFD HYRAPSFPVA PHNLMGMDAM GPAQQEAEDS
601: AKMGTHLSNA SSLVTSLSSS REGSPDKTSL PMLFAIPPSA PKFFATPANT VNSWIPSAQL RPAIPMPHMP VFAAWTDG

Best Arabidopsis Sequence Match ( AT4G37750.1 )
(BLAST)

001: MKSFCDNDDN NHSNTTNLLG FSLSSNMMKM GGRGGREAIY SSSTSSAATS SSSVPPQLVV GDNTSNFGVC YGSNPNGGIY SHMSVMPLRS DGSLCLMEAL
101: NRSSHSNHHQ DSSPKVEDFF GTHHNNTSHK EAMDLSLDSL FYNTTHEPNT TTNFQEFFSF PQTRNHEEET RNYGNDPSLT HGGSFNVGVY GEFQQSLSLS
201: MSPGSQSSCI TGSHHHQQNQ NQNHQSQNHQ QISEALVETS VGFETTTMAA AKKKRGQEDV VVVGQKQIVH RKSIDTFGQR TSQYRGVTRH RWTGRYEAHL
301: WDNSFKKEGH SRKGRQVYLG GYDMEEKAAR AYDLAALKYW GPSTHTNFSA ENYQKEIEDM KNMTRQEYVA HLRRKSSGFS RGASIYRGVT RHHQHGRWQA
401: RIGRVAGNKD LYLGTFGTQE EAAEAYDVAA IKFRGTNAVT NFDITRYDVD RIMSSNTLLS GELARRNNNS IVVRNTEDQT ALNAVVEGGS NKEVSTPERL
501: LSFPAIFALP QVNQKMFGSN MGGNMSPWTS NPNAELKTVA LTLPQMPVFA AWADS

Arabidopsis Description

ANTAP2-like ethylene-responsive transcription factor ANT [Source:UniProtKB/Swiss-Prot;Acc:Q38914]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.