Factsheet for TraesCS1D01G362500.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
MultiLoc:	nucleus
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G357800.1	Wheat	nucleus	99.03	98.55
HORVU1Hr1G080350.3	Barley	nucleus	94.16	95.56
Zm00001d011134_P001	Maize	nucleus	66.91	65.48
EES19874	Sorghum	nucleus	69.34	64.33
Os05t0536250-00	Rice	nucleus	65.45	62.41
KRH01131	Soybean	nucleus	47.93	50.26
KRH40131	Soybean	nucleus	47.45	49.74
VIT_14s0108g00050.t01	Wine grape	nucleus	47.2	48.02
Solyc06g066390.1.1	Tomato	nucleus	46.47	47.16
TraesCS7D01G091100.1	Wheat	nucleus	46.23	46.34
PGSC0003DMT400006170	Potato	nucleus	44.77	45.32
TraesCS5D01G229400.1	Wheat	nucleus	42.58	44.19
Solyc08g076380.1.1	Tomato	nucleus	44.04	41.61
TraesCS4D01G131200.1	Wheat	plastid	29.44	34.08
TraesCS5D01G150500.1	Wheat	plastid	35.04	33.72
TraesCS4D01G182100.1	Wheat	nucleus	28.95	31.65
TraesCS3D01G330400.1	Wheat	plastid	27.74	30.24
TraesCS7D01G483200.1	Wheat	nucleus	33.09	29.0
TraesCS2D01G506500.1	Wheat	nucleus	31.87	27.52
TraesCS4D01G291300.1	Wheat	nucleus	30.41	23.76
TraesCS2D01G256600.2	Wheat	nucleus	34.06	23.33
TraesCS5D01G415500.1	Wheat	nucleus	32.36	21.25
TraesCS6D01G205300.1	Wheat	nucleus	32.85	20.42
TraesCS2D01G357600.1	Wheat	nucleus	32.36	20.31
TraesCS4D01G237300.2	Wheat	nucleus	30.9	20.13
TraesCS3D01G389100.1	Wheat	nucleus	32.6	17.91

Protein Annotations

MapMan:15.5.7.3	MapMan:26.9.2.2	Gene3D:3.30.730.10	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0006139	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	PFAM:PF00847	PFscan:PS51032	PANTHER:PTHR32467
PANTHER:PTHR32467:SF10	SMART:SM00380	SUPFAM:SSF54171	EnsemblPlantsGene:TraesCS1D01G362500	EnsemblPlants:TraesCS1D01G362500.1	TIGR:cd00018
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1D:-:444845403..444846959

Molecular Weight (calculated)

44526.5 Da

IEP (calculated)

9.368

GRAVY (calculated)

-0.414

Length

411 amino acids

Sequence
(BLAST)

001: MDSILMVKSE IESYAGQPAV VGGGGGEVVV RRRRREPTLG PVGGGVGKAS LPGVAVKRSS RFRGVSRHRW TGRYEAHLWD KNSWNPTQRK KGKQVYLGAY
101: DEEEAAARAY DLAALKYWGA TTYTNFPVMD YDKELKIMET LTKEEYLASL RRKSSGFSRG VSKYRGVARH HQNGRWEARI GRVFGNKYLY LGTYGTQEEA
201: ARAYDIAAIE YKGVNAVTNF DLRSYITWLK PPVAGPAVLA DHLLAGMHTQ LPPSPVEHER FLPAEAHLML PPTTAAAPGS PFILDHSAAA LGGGLRRRSS
301: SSSSSTALSL LLKSTMFKQL VERNDPDSPQ GTGGCADRVG ELPAGEGSYE YRDFFHGVSS DVCGLFSSPS NACGNNAGFQ GAAVASCYGS GERMAPTTTP
401: WDGFGDIAAL Q

Best Arabidopsis Sequence Match ( AT1G16060.1 )
(BLAST)

001: MFIAVEVSPV MEDITRQSKK TSVENETGDD QSATSVVLKA KRKRRSQPRD APPQRSSVHR GVTRHRWTGR YEAHLWDKNS WNETQTKKGR QVYLGAYDEE
101: DAAARAYDLA ALKYWGRDTI LNFPLCNYEE DIKEMESQSK EEYIGSLRRK SSGFSRGVSK YRGVAKHHHN GRWEARIGRV FGNKYLYLGT YATQEEAAIA
201: YDIAAIEYRG LNAVTNFDIS RYLKLPVPEN PIDTANNLLE SPHSDLSPFI KPNHESDLSQ SQSSSEDNDD RKTKLLKSSP LVAEEVIGPS TPPEIAPPRR
301: SFPEDIQTYF GCQNSGKLTA EEDDVIFGDL DSFLTPDFYS ELNDC

Arabidopsis Description

ADAPAP2-like ethylene-responsive transcription factor At1g16060 [Source:UniProtKB/Swiss-Prot;Acc:Q94AN4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.