CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
cytosol 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH00957	Soybean	nucleus	89.25	89.0
GSMUA_Achr9P07890_001	Banana	nucleus	47.81	54.17
GSMUA_Achr6P28550_001	Banana	nucleus	48.23	53.36
KRH34229	Soybean	nucleus	42.29	52.0
KRG99477	Soybean	nucleus	30.13	48.52
KRH45549	Soybean	nucleus	30.27	47.87
KRH24688	Soybean	nucleus	36.35	46.47
KRH47304	Soybean	nucleus	18.67	45.52
KRH39470	Soybean	nucleus	31.97	44.14
KRH74476	Soybean	nucleus	31.82	44.12
KRH19032	Soybean	nucleus	32.39	43.37
KRH29690	Soybean	nucleus	36.63	43.31
KRH44591	Soybean	plastid	18.53	41.85
KRH06179	Soybean	nucleus	33.24	40.94
KRH47597	Soybean	nucleus	33.1	40.41
KRH02858	Soybean	nucleus	32.53	39.86
KRH63091	Soybean	plastid	19.38	39.48
KRH55024	Soybean	plastid	19.52	39.32
KRG88628	Soybean	nucleus	26.73	38.97
KRH72352	Soybean	nucleus	19.94	38.63
KRH02994	Soybean	nucleus	19.94	38.11
KRH61449	Soybean	nucleus	34.94	37.25
KRH15454	Soybean	nucleus	31.54	37.23
KRH52140	Soybean	nucleus	34.51	36.97
KRH40131	Soybean	nucleus	20.23	36.48
KRH01131	Soybean	nucleus	20.08	36.22
KRH77164	Soybean	nucleus	30.98	35.61
KRH13193	Soybean	nucleus	20.51	35.19
KRH58159	Soybean	nucleus	33.1	35.19
KRH45852	Soybean	nucleus	20.23	35.14
KRH28322	Soybean	nucleus	30.41	35.13
KRG99157	Soybean	nucleus	20.08	34.98
KRH04380	Soybean	nucleus	33.66	34.8
KRH44733	Soybean	nucleus	20.23	33.57

Protein Annotations

EntrezGene:100526744	MapMan:15.5.7.3	Gene3D:3.30.730.10	EMBL:ACUP02006032	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	EnsemblPlantsGene:GLYMA_09G248200	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	UniProt:K7LFX7	EnsemblPlants:KRH40267
ProteinID:KRH40267	ProteinID:KRH40267.1	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467
PANTHER:PTHR32467:SF72	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000152A5EC	SEG:seg	:

Description

hypothetical protein

Coordinates

chr9:+:46950985..46955740

Molecular Weight (calculated)

77348.4 Da

IEP (calculated)

6.816

GRAVY (calculated)

-0.784

Length

707 amino acids

Sequence
(BLAST)

001: MGSMNLLGFS LSPHEEHPSS QDHSQTTPSR FSFNPDGSIS STDVAGGCFD LTSDSTPHLL NLPSYGIYEA FHRNNSINTT QDWKENYNSQ NLLLGTSCNK
101: QNMNQNQQQQ PKLENFLGGH SFGEHEQTYG GNSASTDYMF PAQPVSAGGG GSGGGSNNNN NSNSIGLSMI KTWLRNQPPN SENINNNNES GGNIRSSVQQ
201: TLSLSMSTGS QSSTSLPLLT ASVDNGESSS DNKQPNTSAA LDSTQTGAIE TAPRKSIDTF GQRTSIYRGV TRHRWTGRYE AHLWDNSCRR EGQTRKGRQV
301: YLGGYDKEEK AARAYDLAAL KYWGTTTTTN FPISHYEKEL EEMKHMTRQE YVASLRRKSS GFSRGASIYR GVTRHHQHGR WQARIGRVAG NKDLYLGTFS
401: TQEEAAEAYD VAAIKFRGLS AVTNFDMSRY DVKSILESTT LPIGGAAKRL KDMEQVELSV DNGHRADQVD HSIIMSSHLT QGINNNYAGG GTATHHNWHN
501: AHAFHQPQPC TTMHYPYGQR INWCKQEQQD NSDAPHSLSY SDIHQLQLGN NGTHNFFHTN SGLHPMLSMD SASIDNSSSS NSVVYDGYGG GGGYNVMPMG
601: TTTAVVASDG DQNPRSNHGF GDNEIKALGY ESVYGSATDS YHAHARNLYY LTQQQSSSVD TVKASAYDQG SACNTWVPTA IPTHAPRSTT SMALCHGATT
701: PFSLLHE

Best Arabidopsis Sequence Match ( AT5G17430.1 )
(BLAST)

001: MNSMNNWLGF SLSPHDQNHH RTDVDSSTTR TAVDVAGGYC FDLAAPSDES SAVQTSFLSP FGVTLEAFTR DNNSHSRDWD INGGACNNIN NNEQNGPKLE
101: NFLGRTTTIY NTNETVVDGN GDCGGGDGGG GGSLGLSMIK TWLSNHSVAN ANHQDNGNGA RGLSLSMNSS TSDSNNYNNN DDVVQEKTIV DVVETTPKKT
201: IESFGQRTSI YRGVTRHRWT GRYEAHLWDN SCKREGQTRK GRQVYLGGYD KEEKAARAYD LAALKYWGTT TTTNFPLSEY EKEVEEMKHM TRQEYVASLR
301: RKSSGFSRGA SIYRGVTRHH QHGRWQARIG RVAGNKDLYL GTFGTQEEAA EAYDIAAIKF RGLSAVTNFD MNRYNVKAIL ESPSLPIGSS AKRLKDVNNP
401: VPAMMISNNV SESANNVSGW QNTAFQHHQG MDLSLLQQQQ ERYVGYYNGG NLSTESTRVC FKQEEEQQHF LRNSPSHMTN VDHHSSTSDD SVTVCGNVVS
501: YGGYQGFAIP VGTSVNYDPF TAAEIAYNAR NHYYYAQHQQ QQQIQQSPGG DFPVAISNNH SSNMYFHGEG GGEGAPTFSV WNDT

Arabidopsis Description

BBMBABY BOOM [Source:UniProtKB/TrEMBL;Acc:A7L9U1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.