Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G395500.1 | Wheat | nucleus | 95.0 | 89.32 |
| TraesCS3D01G389100.1 | Wheat | nucleus | 95.0 | 83.82 |
| TraesCS3B01G427300.1 | Wheat | nucleus, plastid | 94.85 | 83.58 |
| Os01t0899800-01 | Rice | nucleus | 67.88 | 64.46 |
| KXG33917 | Sorghum | nucleus | 66.52 | 62.45 |
| Zm00001d042492_P001 | Maize | nucleus | 66.21 | 61.9 |
| GSMUA_Achr5P25620_001 | Banana | nucleus | 40.61 | 49.26 |
| GSMUA_Achr8P09110_001 | Banana | nucleus | 43.33 | 48.15 |
| HORVU4Hr1G052880.2 | Barley | nucleus | 15.15 | 46.95 |
| HORVU7Hr1G111060.4 | Barley | nucleus | 31.52 | 44.54 |
| HORVU6Hr1G057060.3 | Barley | nucleus | 42.12 | 42.64 |
| HORVU2Hr1G087310.1 | Barley | nucleus | 41.36 | 41.43 |
| HORVU4Hr1G076200.4 | Barley | nucleus | 30.91 | 37.02 |
| HORVU4Hr1G065990.2 | Barley | nucleus | 31.82 | 33.12 |
| HORVU1Hr1G080350.3 | Barley | nucleus | 19.85 | 32.35 |
| HORVU5Hr1G098450.2 | Barley | nucleus | 30.0 | 31.38 |
| HORVU5Hr1G045290.10 | Barley | nucleus, plastid | 19.85 | 30.05 |
Protein Annotations
| MapMan:15.5.7.3 | Gene3D:3.30.730.10 | UniProt:A0A287M6F9 | InterPro:AP2-like_transcript_factor | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:HORVU3Hr1G089160 | EnsemblPlants:HORVU3Hr1G089160.2 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 | PRINTS:PR00367 |
| PFscan:PS51032 | PANTHER:PTHR32467 | PANTHER:PTHR32467:SF42 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI000B47ED3E |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:+:627749990..627754914
Molecular Weight (calculated)
69451.3 Da
IEP (calculated)
7.207
GRAVY (calculated)
-0.441
Length
660 amino acids
Sequence
(BLAST)
(BLAST)
001: MATVNNWLGF SLSPQELPPS ASASGDVSGA DVCYNIPQDW NMRGSELSAL VAEPKLEDFL GGISYSDHHH HHKQAGGNNM VVPAGSGSGG AACYASSGGS
101: SVGYLYHPSS ASLQFADSVM VASSAGGLHH DGAGIMANAT ANGDLHNGGT GGGIGLSMIK SWLRSQPSPA QQPEQQRAEV AAQGLSLSMN MAAGMPQLVG
201: GERGPQELAI VRKDDTAGGS SAGSGAVVSA GADSTGGSSG AVVETPASRK TADTFGQRTS IYRGVTRHRW TGRYEAHLWD NSCRREGQTR KGRQGGYDKE
301: EKAARAYDLA ALKYWGATTT TNFPVNNYEK ELEEMKHMTR QEFVASLRRK SSGFSRGASI YRGVTRHHQH GRWQARIGRV AGNKDLYLGT FSTQEEAAEA
401: YDIAAIKFRG LNAVTNFDMT RYDVKSILDS TALPIGSAAK RLKDAEAATA SSLAQQQHHA GVVSGYDIGA LAAYGAAYHH HHPSVAGAAA WPTIAFQALP
501: QQQVSSVGGG HMYHPYAHAQ PLRGWCKQEP DHAVIAAAHS LQELHHLNLG AGAGAHDFFS QHAQSMQQQH GGHGSIDNAA GASLEHSTGS NSVVYNNGAV
601: ESFMLPMSTT TTATASHAHE QAAAAHAHAR AVAAQAYSGG NMSRDHDDGK IAYENYLVST
101: SVGYLYHPSS ASLQFADSVM VASSAGGLHH DGAGIMANAT ANGDLHNGGT GGGIGLSMIK SWLRSQPSPA QQPEQQRAEV AAQGLSLSMN MAAGMPQLVG
201: GERGPQELAI VRKDDTAGGS SAGSGAVVSA GADSTGGSSG AVVETPASRK TADTFGQRTS IYRGVTRHRW TGRYEAHLWD NSCRREGQTR KGRQGGYDKE
301: EKAARAYDLA ALKYWGATTT TNFPVNNYEK ELEEMKHMTR QEFVASLRRK SSGFSRGASI YRGVTRHHQH GRWQARIGRV AGNKDLYLGT FSTQEEAAEA
401: YDIAAIKFRG LNAVTNFDMT RYDVKSILDS TALPIGSAAK RLKDAEAATA SSLAQQQHHA GVVSGYDIGA LAAYGAAYHH HHPSVAGAAA WPTIAFQALP
501: QQQVSSVGGG HMYHPYAHAQ PLRGWCKQEP DHAVIAAAHS LQELHHLNLG AGAGAHDFFS QHAQSMQQQH GGHGSIDNAA GASLEHSTGS NSVVYNNGAV
601: ESFMLPMSTT TTATASHAHE QAAAAHAHAR AVAAQAYSGG NMSRDHDDGK IAYENYLVST
001: MNSNNWLGFP LSPNNSSLPP HEYNLGLVSD HMDNPFQTQE WNMINPHGGG GDEGGEVPKV ADFLGVSKPD ENQSNHLVAY NDSDYYFHTN SLMPSVQSND
101: VVVAACDSNT PNNSSYHELQ ESAHNLQSLT LSMGTTAGNN VVDKASPSET TGDNASGGAL AVVETATPRR ALDTFGQRTS IYRGVTRHRW TGRYEAHLWD
201: NSCRREGQSR KGRQVYLGGY DKEDKAARSY DLAALKYWGP STTTNFPITN YEKEVEEMKH MTRQEFVAAI RRKSSGFSRG ASMYRGVTRH HQHGRWQARI
301: GRVAGNKDLY LGTFSTEEEA AEAYDIAAIK FRGLNAVTNF EINRYDVKAI LESSTLPIGG GAAKRLKEAQ ALESSRKREA EMIALGSSFQ YGGGSSTGSG
401: STSSRLQLQP YPLSIQQPLE PFLSLQNNDI SHYNNNNAHD SSSFNHHSYI QTQLHLHQQT NNYLQQQSSQ NSQQLYNAYL HSNPALLHGL VSTSIVDNNN
501: NNGGSSGSYN TAAFLGNHGI GIGSSSTVGS TEEFPTVKTD YDMPSSDGTG GYSGWTSESV QGSNPGGVFT MWNE
101: VVVAACDSNT PNNSSYHELQ ESAHNLQSLT LSMGTTAGNN VVDKASPSET TGDNASGGAL AVVETATPRR ALDTFGQRTS IYRGVTRHRW TGRYEAHLWD
201: NSCRREGQSR KGRQVYLGGY DKEDKAARSY DLAALKYWGP STTTNFPITN YEKEVEEMKH MTRQEFVAAI RRKSSGFSRG ASMYRGVTRH HQHGRWQARI
301: GRVAGNKDLY LGTFSTEEEA AEAYDIAAIK FRGLNAVTNF EINRYDVKAI LESSTLPIGG GAAKRLKEAQ ALESSRKREA EMIALGSSFQ YGGGSSTGSG
401: STSSRLQLQP YPLSIQQPLE PFLSLQNNDI SHYNNNNAHD SSSFNHHSYI QTQLHLHQQT NNYLQQQSSQ NSQQLYNAYL HSNPALLHGL VSTSIVDNNN
501: NNGGSSGSYN TAAFLGNHGI GIGSSSTVGS TEEFPTVKTD YDMPSSDGTG GYSGWTSESV QGSNPGGVFT MWNE
Arabidopsis Description
PLT1AP2-like ethylene-responsive transcription factor PLT1 [Source:UniProtKB/Swiss-Prot;Acc:Q5YGP8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.