Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G089160.2 | Barley | nucleus | 89.32 | 95.0 |
| TraesCS3D01G389100.1 | Wheat | nucleus | 96.87 | 90.91 |
| TraesCS3B01G427300.1 | Wheat | nucleus, plastid | 96.44 | 90.39 |
| Os01t0899800-01 | Rice | nucleus | 68.38 | 69.06 |
| KXG33917 | Sorghum | nucleus | 66.24 | 66.15 |
| Zm00001d042492_P001 | Maize | nucleus | 64.67 | 64.31 |
| GSMUA_Achr5P25620_001 | Banana | nucleus | 39.89 | 51.47 |
| GSMUA_Achr8P09110_001 | Banana | nucleus | 42.45 | 50.17 |
| TraesCS7A01G495800.1 | Wheat | nucleus | 31.05 | 46.48 |
| TraesCS4A01G123800.1 | Wheat | nucleus | 24.5 | 45.5 |
| TraesCS2A01G505600.1 | Wheat | nucleus | 29.91 | 43.93 |
| TraesCS6A01G229500.1 | Wheat | nucleus | 40.17 | 42.79 |
| TraesCS4A01G011600.1 | Wheat | nucleus | 30.63 | 40.72 |
| TraesCS5A01G221600.1 | Wheat | nucleus | 20.23 | 35.86 |
| TraesCS2A01G267600.2 | Wheat | nucleus | 30.63 | 35.77 |
| TraesCS4A01G060400.1 | Wheat | nucleus | 31.62 | 35.41 |
| TraesCS7A01G095100.1 | Wheat | nucleus | 20.23 | 34.8 |
| TraesCS4A01G395400.1 | Wheat | nucleus | 20.23 | 34.72 |
| TraesCS5A01G405400.1 | Wheat | nucleus | 30.48 | 34.02 |
| TraesCS6A01G125700.1 | Wheat | nucleus | 16.52 | 33.24 |
| TraesCS1A01G357800.1 | Wheat | nucleus | 19.09 | 32.45 |
| TraesCS4A01G181300.1 | Wheat | plastid | 16.38 | 31.86 |
| TraesCS5A01G141700.1 | Wheat | plastid | 19.37 | 31.78 |
Protein Annotations
| MapMan:15.5.7.3 | Gene3D:3.30.730.10 | InterPro:AP2-like_transcript_factor | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR32467 |
| PANTHER:PTHR32467:SF42 | SMART:SM00380 | SUPFAM:SSF54171 | EnsemblPlantsGene:TraesCS3A01G395500 | EnsemblPlants:TraesCS3A01G395500.1 | TIGR:cd00018 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr3A:+:642918605..642922908
Molecular Weight (calculated)
73681.3 Da
IEP (calculated)
7.177
GRAVY (calculated)
-0.412
Length
702 amino acids
Sequence
(BLAST)
(BLAST)
001: MATVNNWLGF SLSPQELPPS AAASGDVSGA DVCYNIPQDW NMRGSELSAL VAEPKLEDFL GGISYSDHHH HHKQAGGNNM VVPAGSGSGG AACYTTSGGS
101: SVGYLYHPSS ASLQFADSVM VASSGGGVHH DGAGIMANTT ANGDLNNGSG GGGIGLSMIK SWLRSQPSPA QPPEQQRADA AAQGLSLSMN MAACMPPLVG
201: GERGVPELAI VRKDDTAGGS SAGSGAVVSA GGADSTGGSS GVVVETPASR KTADTFGQRT SIYRGVTRHR WTGRYEAHLW DNSCRREGQT RKGRQVYLGG
301: YDKEEKAARA YDLAALKYWG ATTTTNFPVN NYEKELEEMK HMTRQEFVAS LRRKSSGFSR GASIYRGVTR HHQHGRWQAR IGRVAGNKDL YLGTFSTQEE
401: AAEAYDIAAI KFRGLNAVTN FDMTRYDVKS ILDSTALPIG SAAKRLKDAE AATASSLALQ QQQHAGVVSG YDMGALAAYG AAYHHHHPSV AGAVAWPTIA
501: FQAPPHQVSS GGGGHMYHPY AHAQPLRGWC KQEPDHAVIA AAHSLQELHH LNLGAGGGAH DFFSQHAQAM QQQHGGLGSI HNAAGASLEH STGSNSVVYN
601: NGGVESYMLP MSTTTTATAS HAREQVAAHA HARAVAAQAY SGGNMSRDHD DGKIAYENYL VSTAEAYGGG RMAAWAQASA PPATSSSDMT GAQLFSVWND
701: SN
101: SVGYLYHPSS ASLQFADSVM VASSGGGVHH DGAGIMANTT ANGDLNNGSG GGGIGLSMIK SWLRSQPSPA QPPEQQRADA AAQGLSLSMN MAACMPPLVG
201: GERGVPELAI VRKDDTAGGS SAGSGAVVSA GGADSTGGSS GVVVETPASR KTADTFGQRT SIYRGVTRHR WTGRYEAHLW DNSCRREGQT RKGRQVYLGG
301: YDKEEKAARA YDLAALKYWG ATTTTNFPVN NYEKELEEMK HMTRQEFVAS LRRKSSGFSR GASIYRGVTR HHQHGRWQAR IGRVAGNKDL YLGTFSTQEE
401: AAEAYDIAAI KFRGLNAVTN FDMTRYDVKS ILDSTALPIG SAAKRLKDAE AATASSLALQ QQQHAGVVSG YDMGALAAYG AAYHHHHPSV AGAVAWPTIA
501: FQAPPHQVSS GGGGHMYHPY AHAQPLRGWC KQEPDHAVIA AAHSLQELHH LNLGAGGGAH DFFSQHAQAM QQQHGGLGSI HNAAGASLEH STGSNSVVYN
601: NGGVESYMLP MSTTTTATAS HAREQVAAHA HARAVAAQAY SGGNMSRDHD DGKIAYENYL VSTAEAYGGG RMAAWAQASA PPATSSSDMT GAQLFSVWND
701: SN
001: MNSNNWLGFP LSPNNSSLPP HEYNLGLVSD HMDNPFQTQE WNMINPHGGG GDEGGEVPKV ADFLGVSKPD ENQSNHLVAY NDSDYYFHTN SLMPSVQSND
101: VVVAACDSNT PNNSSYHELQ ESAHNLQSLT LSMGTTAGNN VVDKASPSET TGDNASGGAL AVVETATPRR ALDTFGQRTS IYRGVTRHRW TGRYEAHLWD
201: NSCRREGQSR KGRQVYLGGY DKEDKAARSY DLAALKYWGP STTTNFPITN YEKEVEEMKH MTRQEFVAAI RRKSSGFSRG ASMYRGVTRH HQHGRWQARI
301: GRVAGNKDLY LGTFSTEEEA AEAYDIAAIK FRGLNAVTNF EINRYDVKAI LESSTLPIGG GAAKRLKEAQ ALESSRKREA EMIALGSSFQ YGGGSSTGSG
401: STSSRLQLQP YPLSIQQPLE PFLSLQNNDI SHYNNNNAHD SSSFNHHSYI QTQLHLHQQT NNYLQQQSSQ NSQQLYNAYL HSNPALLHGL VSTSIVDNNN
501: NNGGSSGSYN TAAFLGNHGI GIGSSSTVGS TEEFPTVKTD YDMPSSDGTG GYSGWTSESV QGSNPGGVFT MWNE
101: VVVAACDSNT PNNSSYHELQ ESAHNLQSLT LSMGTTAGNN VVDKASPSET TGDNASGGAL AVVETATPRR ALDTFGQRTS IYRGVTRHRW TGRYEAHLWD
201: NSCRREGQSR KGRQVYLGGY DKEDKAARSY DLAALKYWGP STTTNFPITN YEKEVEEMKH MTRQEFVAAI RRKSSGFSRG ASMYRGVTRH HQHGRWQARI
301: GRVAGNKDLY LGTFSTEEEA AEAYDIAAIK FRGLNAVTNF EINRYDVKAI LESSTLPIGG GAAKRLKEAQ ALESSRKREA EMIALGSSFQ YGGGSSTGSG
401: STSSRLQLQP YPLSIQQPLE PFLSLQNNDI SHYNNNNAHD SSSFNHHSYI QTQLHLHQQT NNYLQQQSSQ NSQQLYNAYL HSNPALLHGL VSTSIVDNNN
501: NNGGSSGSYN TAAFLGNHGI GIGSSSTVGS TEEFPTVKTD YDMPSSDGTG GYSGWTSESV QGSNPGGVFT MWNE
Arabidopsis Description
PLT1AP2-like ethylene-responsive transcription factor PLT1 [Source:UniProtKB/Swiss-Prot;Acc:Q5YGP8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.