Factsheet for GSMUA_Achr9P13660_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P05070_001	Banana	nucleus	82.34	78.9
GSMUA_AchrUn_...	Banana	nucleus	73.85	68.66
VIT_11s0052g00840.t01	Wine grape	nucleus	63.76	55.49
GSMUA_AchrUn_...	Banana	nucleus	46.79	51.52
KRH19032	Soybean	nucleus	59.63	49.24
GSMUA_Achr1P24940_001	Banana	nucleus	35.78	46.29
GSMUA_Achr8P26510_001	Banana	nucleus	35.78	46.15
KRH02858	Soybean	nucleus	60.32	45.58
GSMUA_Achr4P32280_001	Banana	nucleus	39.68	40.9
GSMUA_Achr5P25620_001	Banana	nucleus	46.33	37.13
GSMUA_Achr2P05880_001	Banana	nucleus	48.62	37.06
GSMUA_Achr8P09110_001	Banana	nucleus	49.77	36.53
GSMUA_Achr8P09350_001	Banana	plastid	29.82	35.91
GSMUA_Achr5P04670_001	Banana	nucleus	29.36	35.56
GSMUA_Achr1P21950_001	Banana	nucleus	45.87	35.52
GSMUA_Achr3P21460_001	Banana	nucleus	49.31	35.13
GSMUA_Achr1P12410_001	Banana	nucleus	43.58	34.48
GSMUA_Achr9P07890_001	Banana	nucleus	49.08	34.29
GSMUA_Achr6P28550_001	Banana	nucleus	49.31	33.65
GSMUA_Achr3P15150_001	Banana	nucleus	42.2	33.39
GSMUA_Achr7P00740_001	Banana	nucleus	41.05	33.09
GSMUA_Achr3P09410_001	Banana	nucleus	26.38	32.12
GSMUA_Achr3P30690_001	Banana	nucleus	42.89	32.08
GSMUA_Achr11P...	Banana	nucleus	38.3	30.25
GSMUA_Achr3P03630_001	Banana	plastid	28.67	30.19
GSMUA_Achr7P27500_001	Banana	nucleus	42.2	29.87
GSMUA_Achr3P32510_001	Banana	nucleus	26.38	27.19

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr9G13660_001
EnsemblPlants:GSMUA_Achr9P13660_001	EnsemblPlants:GSMUA_Achr9T13660_001	InterPro:IPR001471	InterPro:IPR036955	UniProt:M0U024	PFAM:PF00847
PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF72	SMART:SM00380	SUPFAM:SSF54171
UniParc:UPI000295F8B0	SEG:seg	:	:	:	:

Description

AP2 domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G13660_001]

Coordinates

chr9:+:8889104..8891212

Molecular Weight (calculated)

47552.0 Da

IEP (calculated)

6.614

GRAVY (calculated)

-0.597

Length

436 amino acids

Sequence
(BLAST)

001: MDMDATHNWL AFSLSQQPCF LEAFSSVAAP PHHHGGIEGA EEETSAATEL VALASMGPKL EDFLGGPMGR YSSAEDAASP AEGVYDSDLK TIAAGFLRGL
101: PVEQQEPHSA KEAAPKVESR KTTADTFGQR TSIYRGVTRH RWTGRYEAHL WDNSCRREGQ SRKGRQVYLG GYDKEEKAAR AYDLAALKYW GPTTTTNFPI
201: SNYEKELEGM KNMTRQEFVA SLRRKSSGFS RGASIYRGVT RHHQHGRWQA RIGRVAGNKD LYLGTFSTQE EAAEAYDIAA IKFRGLNAVT NFDMSRYDIN
301: SIVNNDLPIG GLSGRPSKAS ESSPSSSSDC MSQDHDYWSL LALHHQPSGF GLFSSGDTMD FATATSSKGM LEHQQEQSQS SSYSPVPCAT YVACGGGHSY
401: DGSNIMGGWA APPSSYQQPA SKPHVAAFQS AIFGME

Best Arabidopsis Sequence Match ( AT5G57390.1 )
(BLAST)

001: MKNNNNKSSS SSSYDSSLSP SSSSSSHQNW LSFSLSNNNN NFNSSSNPNL TSSTSDHHHP HPSHLSLFQA FSTSPVERQD GSPGVSPSDA TAVLSVYPGG
101: PKLENFLGGG ASTTTTRPMQ QVQSLGGVVF SSDLQPPLHP PSAAEIYDSE LKSIAASFLG NYSGGHSSEV SSVHKQQPNP LAVSEASPTP KKNVESFGQR
201: TSIYRGVTRH RWTGRYEAHL WDNSCRREGQ SRKGRQVYLG GYDKEDKAAR AYDLAALKYW GPTTTTNFPI SNYESELEEM KHMTRQEFVA SLRRKSSGFS
301: RGASMYRGVT RHHQHGRWQA RIGRVAGNKD LYLGTFSTQE EAAEAYDIAA IKFRGLNAVT NFDISRYDVK SIASCNLPVG GLMPKPSPAT AAADKTVDLS
401: PSDSPSLTTP SLTFNVATPV NDHGGTFYHT GIPIKPDPAD HYWSNIFGFQ ANPKAEMRPL ANFGSDLHNP SPGYAIMPVM QEGENNFGGS FVGSDGYNNH
501: SAASNPVSAI PLSSTTTMSN GNEGYGGNIN WINNNISSSY QTAKSNLSVL HTPVFGLE

Arabidopsis Description

AIL5AP2-like ethylene-responsive transcription factor AIL5 [Source:UniProtKB/Swiss-Prot;Acc:Q6PQQ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.