Factsheet for Bra026720.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51002	Canola	nucleus	99.28	99.28
CDX81764	Canola	nucleus	98.21	98.21
AT1G16490.1	Thale cress	nucleus	79.21	80.66
Bra026048.1-P	Field mustard	nucleus	73.48	72.44
Bra003619.1-P	Field mustard	nucleus	61.29	64.04
Bra035097.1-P	Field mustard	nucleus	61.65	63.7
PGSC0003DMT400089342	Potato	nucleus	41.94	48.55
PGSC0003DMT400029235	Potato	nucleus	41.22	48.12
Solyc10g005550.1.1	Tomato	nucleus	40.86	46.91
Bra001472.1-P	Field mustard	nucleus	36.92	44.21
Bra039344.1-P	Field mustard	nucleus	35.84	42.19
Bra030812.1-P	Field mustard	nucleus	42.65	39.8
Bra021708.1-P	Field mustard	nucleus	35.48	39.6
Bra015481.1-P	Field mustard	nucleus	35.48	39.29
Bra022831.1-P	Field mustard	nucleus	34.41	39.02
KRH13720	Soybean	nucleus	48.03	38.84
VIT_19s0085g00050.t01	Wine grape	nucleus	50.54	38.74
Bra018267.1-P	Field mustard	nucleus	34.77	38.34
Bra014929.1-P	Field mustard	nucleus	38.35	37.54
KRH43737	Soybean	nucleus	51.25	37.05
Bra001907.1-P	Field mustard	nucleus	37.28	36.36
Bra023742.1-P	Field mustard	nucleus	36.56	36.3

Protein Annotations

EnsemblPlants:Bra026720.1	EnsemblPlants:Bra026720.1-P	EnsemblPlantsGene:Bra026720	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb
ncoils:Coil	PANTHER:PTHR10641	PANTHER:PTHR10641:SF462	PFAM:PF00249	PFscan:PS51294	SEG:seg
SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI0002542C49	UniProt:M4ED60	MapMan:15.5.2.1	:

Description

AT1G16490 (E=4e-114) ATMYB58, MYB58 | MYB58 (MYB DOMAIN PROTEIN 58); DNA binding / transcription activator/ transcription factor

Coordinates

chrA09:+:33392331..33393349

Molecular Weight (calculated)

32214.1 Da

IEP (calculated)

4.677

GRAVY (calculated)

-1.070

Length

279 amino acids

Sequence
(BLAST)

001: MGKGRAPCCD KTKVKRGPWS QDEDLKLISF IHKYGHENWR SLPKQAGLLR CGKSCRLRWI NYLRPDLKRG NFTLEEEETI IKLHQSFGNK WSKIASKLPG
101: RTDNEIKNVW HTHLKKRLSS YINHNANDEA ASKGSLNKEE TSQESSPNAS RSFGGSNTVS KEEEDDVQIG ETFEYFQDYS ELAGLLQEVD KPELLEIPFD
201: MDPDVWNFLE GFQQPENSLT PKDHQESEED EVDKWFKNLE SELGLEEDDS QQQQEQHNEA KEDSPSPSLL ESYEVLINH

Best Arabidopsis Sequence Match ( AT1G16490.1 )
(BLAST)

001: MGKGRAPCCD KTKVKRGPWS HDEDLKLISF IHKNGHENWR SLPKQAGLLR CGKSCRLRWI NYLRPDVKRG NFSAEEEDTI IKLHQSFGNK WSKIASKLPG
101: RTDNEIKNVW HTHLKKRLSS ETNLNADEAG SKGSLNEEEN SQESSPNASM SFAGSNISSK DDDAQISQMF EHILTYSEFT GMLQEVDKPE LLEMPFDLDP
201: DIWSFIDGSD SFQQPENRAL QESEEDEVDK WFKHLESELG LEENDNQQQQ QQHKQGTEDE HSSSLLESYE LLIH

Arabidopsis Description

MYB58Transcription factor MYB58 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA47]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.