Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G56160.1 | KRH10163 | AT1G73730.1 | 18218967 |
| AT1G56160.1 | KRH23176 | AT1G73730.1 | 18218967 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH13720 | Soybean | nucleus | 67.88 | 75.94 |
| CDX73800 | Canola | nucleus | 18.39 | 59.66 |
| CDY55883 | Canola | nucleus | 31.09 | 57.42 |
| CDY35101 | Canola | nucleus | 30.83 | 57.21 |
| CDX79305 | Canola | nucleus | 36.27 | 56.68 |
| CDX88513 | Canola | nucleus | 37.56 | 53.7 |
| CDX87403 | Canola | nucleus | 37.31 | 53.33 |
| Bra035097.1-P | Field mustard | nucleus | 37.05 | 52.96 |
| Bra003619.1-P | Field mustard | nucleus | 36.27 | 52.43 |
| CDX68004 | Canola | nucleus | 36.27 | 52.43 |
| AT1G16490.1 | Thale cress | nucleus | 36.79 | 51.82 |
| CDX81764 | Canola | nucleus | 37.31 | 51.61 |
| Bra026720.1-P | Field mustard | nucleus | 37.05 | 51.25 |
| CDY51002 | Canola | nucleus | 36.79 | 50.9 |
| Bra026048.1-P | Field mustard | nucleus | 36.27 | 49.47 |
| Solyc10g005550.1.1 | Tomato | nucleus | 31.09 | 49.38 |
| PGSC0003DMT400029235 | Potato | nucleus | 30.57 | 49.37 |
| AT3G12820.1 | Thale cress | nucleus | 30.05 | 48.54 |
| CDY24243 | Canola | nucleus | 29.27 | 47.88 |
| PGSC0003DMT400089342 | Potato | nucleus | 29.79 | 47.72 |
| Bra039344.1-P | Field mustard | nucleus | 29.27 | 47.68 |
| CDY43399 | Canola | nucleus | 29.27 | 47.68 |
| Bra001472.1-P | Field mustard | nucleus | 28.76 | 47.64 |
| KRH56057 | Soybean | nucleus | 19.69 | 47.5 |
| CDY00800 | Canola | nucleus | 26.68 | 47.25 |
| AT1G79180.2 | Thale cress | nucleus | 38.08 | 44.95 |
| KRH34142 | Soybean | nucleus | 24.09 | 44.29 |
| AT1G56160.1 | Thale cress | nucleus | 32.9 | 42.91 |
| KRH22481 | Soybean | nucleus | 24.61 | 41.85 |
| KRH68789 | Soybean | nucleus | 22.54 | 41.63 |
| KRG97042 | Soybean | nucleus | 22.8 | 41.51 |
| KRH32183 | Soybean | nucleus | 25.13 | 40.93 |
| KRH56060 | Soybean | nucleus | 24.35 | 40.87 |
| VIT_19s0085g00050.t01 | Wine grape | nucleus | 38.34 | 40.66 |
| KRH31704 | Soybean | nucleus | 27.72 | 40.53 |
| CDY10506 | Canola | nucleus | 31.35 | 40.47 |
| KRH69121 | Soybean | nucleus | 27.46 | 40.15 |
| Bra030812.1-P | Field mustard | nucleus | 31.09 | 40.13 |
| CDY42408 | Canola | nucleus | 31.09 | 40.13 |
| CDY35097 | Canola | nucleus | 14.25 | 39.86 |
| KRH25458 | Soybean | nucleus | 24.09 | 39.74 |
| KRG92419 | Soybean | nucleus | 27.72 | 39.34 |
| KRH34387 | Soybean | nucleus | 27.72 | 38.91 |
| KRG95664 | Soybean | nucleus | 28.76 | 38.14 |
| KRH67378 | Soybean | nucleus | 28.76 | 37.76 |
| KRH56061 | Soybean | nucleus | 23.32 | 37.19 |
| KRH56056 | Soybean | nucleus | 22.02 | 36.17 |
| KRH25468 | Soybean | nucleus | 21.24 | 35.04 |
| KRH26874 | Soybean | nucleus | 22.28 | 34.26 |
| KRH25461 | Soybean | nucleus | 25.39 | 32.13 |
| KRH56059 | Soybean | nucleus | 26.17 | 31.17 |
| KRH56058 | Soybean | nucleus | 25.65 | 31.13 |
| KRH25459 | Soybean | nucleus | 24.09 | 30.9 |
| KRH26875 | Soybean | nucleus | 24.09 | 29.71 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100805511 | MapMan:15.5.2.1 | EMBL:ACUP02004886 | EnsemblPlantsGene:GLYMA_08G168100 | GO:GO:0000981 |
| GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 |
| GO:GO:0044212 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:K7L768 | EnsemblPlants:KRH43737 | ProteinID:KRH43737 |
| ProteinID:KRH43737.1 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF923 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0002338E3F | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr8:-:13245124..13248502
Molecular Weight (calculated)
43988.7 Da
IEP (calculated)
4.539
GRAVY (calculated)
-0.930
Length
386 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKGRAPCCD KTQVKRGPWS PAEDLKLIAF IQKYGHENWR ALPKQAGLLR CGKSCRLRWI NYLRPDVKRG NFTLEEEENI IRLHKALGNK WSKIASRLPG
101: RTDNEIKNVW NTHLKKRLAP KKGSESSADE SKPESSITSA SSSSSESFFS YERPNSPKTT TPCNNDQFND QAEKLSIEDK MEQDSEKQVS NELANITEDP
201: KGSSVSLSSD ESNIVNTSQI VEHKPEEEQL ASPLPYLGHY DVGSMLEEVD KPNQLIEIPW EPDYDFWKLL DDDNSLESFQ SNEVQLGEFP AIQNIILGEE
301: SVHDAEAKKW SQDFENEFGV VGEMKESNKD HFLPKNYAVE PEMDHTQAFD FDDIDMARPE SELDLGYIQL WSSWPQNNNN NNNNSL
101: RTDNEIKNVW NTHLKKRLAP KKGSESSADE SKPESSITSA SSSSSESFFS YERPNSPKTT TPCNNDQFND QAEKLSIEDK MEQDSEKQVS NELANITEDP
201: KGSSVSLSSD ESNIVNTSQI VEHKPEEEQL ASPLPYLGHY DVGSMLEEVD KPNQLIEIPW EPDYDFWKLL DDDNSLESFQ SNEVQLGEFP AIQNIILGEE
301: SVHDAEAKKW SQDFENEFGV VGEMKESNKD HFLPKNYAVE PEMDHTQAFD FDDIDMARPE SELDLGYIQL WSSWPQNNNN NNNNSL
001: MGKGRAPCCD KTKVKRGPWS PEEDIKLISF IQKFGHENWR SLPKQSGLLR CGKSCRLRWI NYLRPDLKRG NFTSEEEETI IKLHHNYGNK WSKIASQLPG
101: RTDNEIKNVW HTHLKKRLAQ SSGTADEPAS PCSSDSVSRG KDDKSSHVED SLNRETNHRN ELSTSMSSGG SNQQDDPKID ELRFEYIEEA YSEFNDIIIQ
201: EVDKPDLLEI PFDSDPDIWS FLDTSNSFQQ STANENSSGS RATTEEESDE DEVKKWFKHL ESELGLEEDD NQQQYKEEES SSSSLLKNYE LMIH
101: RTDNEIKNVW HTHLKKRLAQ SSGTADEPAS PCSSDSVSRG KDDKSSHVED SLNRETNHRN ELSTSMSSGG SNQQDDPKID ELRFEYIEEA YSEFNDIIIQ
201: EVDKPDLLEI PFDSDPDIWS FLDTSNSFQQ STANENSSGS RATTEEESDE DEVKKWFKHL ESELGLEEDD NQQQYKEEES SSSSLLKNYE LMIH
Arabidopsis Description
ATMYB63myb domain protein 63 [Source:TAIR;Acc:AT1G79180]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.