Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003619.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDX79305 | Canola | nucleus | 90.26 | 97.57 |
| CDX69310 | Canola | nucleus | 20.22 | 80.6 |
| CDX88513 | Canola | nucleus | 77.15 | 76.3 |
| CDX87403 | Canola | nucleus | 77.15 | 76.3 |
| AT1G79180.2 | Thale cress | nucleus | 81.27 | 66.36 |
| CDY35101 | Canola | nucleus | 50.94 | 65.38 |
| CDY55883 | Canola | nucleus | 50.94 | 65.07 |
| CDY51002 | Canola | nucleus | 63.67 | 60.93 |
| CDX81764 | Canola | nucleus | 63.3 | 60.57 |
| CDX73800 | Canola | nucleus | 26.22 | 58.82 |
| PGSC0003DMT400029235 | Potato | nucleus | 41.95 | 46.86 |
| Solyc10g005550.1.1 | Tomato | nucleus | 42.32 | 46.5 |
| PGSC0003DMT400089342 | Potato | nucleus | 40.07 | 44.4 |
| CDY15424 | Canola | nucleus | 35.58 | 42.99 |
| CDY00800 | Canola | nucleus | 33.33 | 40.83 |
| CDY43399 | Canola | nucleus | 35.96 | 40.51 |
| CDY24243 | Canola | nucleus | 35.58 | 40.25 |
| CDY35097 | Canola | nucleus | 20.6 | 39.86 |
| CDY10182 | Canola | nucleus | 37.08 | 39.6 |
| CDY47723 | Canola | nucleus | 37.08 | 39.29 |
| CDY57089 | Canola | nucleus | 36.7 | 39.2 |
| CDX84795 | Canola | nucleus | 35.96 | 39.02 |
| CDY23952 | Canola | nucleus | 35.96 | 39.02 |
| KRH13720 | Soybean | nucleus | 50.19 | 38.84 |
| CDY42408 | Canola | nucleus | 43.45 | 38.8 |
| CDY10506 | Canola | nucleus | 43.45 | 38.8 |
| VIT_19s0085g00050.t01 | Wine grape | nucleus | 52.81 | 38.74 |
| CDY35519 | Canola | nucleus | 35.96 | 38.25 |
| CDY70982 | Canola | nucleus | 34.83 | 36.76 |
| CDY08989 | Canola | nucleus | 35.96 | 36.36 |
| KRH43737 | Soybean | nucleus | 52.43 | 36.27 |
| CDX92979 | Canola | nucleus | 36.33 | 35.79 |
| CDX77536 | Canola | nucleus | 38.2 | 35.79 |
| CDX85074 | Canola | nucleus | 37.83 | 35.44 |
| CDY15425 | Canola | nucleus | 4.87 | 12.15 |
| CDX73801 | Canola | nucleus | 2.25 | 8.96 |
Protein Annotations
| EnsemblPlants:CDX68004 | EnsemblPlantsGene:GSBRNA2T00099221001 | Gene3D:1.10.10.60 | GO:A0A078BW37 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF462 | PFAM:PF00249 | PFscan:PS51294 | ProteinID:CDX68004 | ProteinID:CDX68004.1 |
| SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI00025413E4 | MapMan:15.5.2.1 | : |
Description
BnaA07g20440D
Coordinates
chrLK031787:-:3293593..3294569
Molecular Weight (calculated)
30277.9 Da
IEP (calculated)
5.281
GRAVY (calculated)
-0.958
Length
267 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKGRAPCCD KTKVKRGPWS PEEDLKLISF IQKFGHENWR SLPKQSGLLR CGKSCRLRWI NYLRPDVKRG NFTAEEEETI IKLHQNYGNK WSRIASQLPG
101: RTDNEIKNVW HTRLKKILVQ SSATSPCSSN SVSCGKEDKS QAEGCLNTKT SQDFTTSVSS GGSYNSNQED DPKIGLLFKY SAFNDIIQEV DKPDLEIPFD
201: SDPDIWSFLD SSNSLQQSGA NEFRAEEESD EDEVKKWFKH MESELELEEA DNEHHKPGTQ ESSSSCS
101: RTDNEIKNVW HTRLKKILVQ SSATSPCSSN SVSCGKEDKS QAEGCLNTKT SQDFTTSVSS GGSYNSNQED DPKIGLLFKY SAFNDIIQEV DKPDLEIPFD
201: SDPDIWSFLD SSNSLQQSGA NEFRAEEESD EDEVKKWFKH MESELELEEA DNEHHKPGTQ ESSSSCS
001: MGKGRAPCCD KTKVKRGPWS PEEDIKLISF IQKFGHENWR SLPKQSGLLR CGKSCRLRWI NYLRPDLKRG NFTSEEEETI IKLHHNYGNK WSKIASQLPG
101: RTDNEIKNVW HTHLKKRLAQ SSGTADEPAS PCSSDSVSRG KDDKSSHVED SLNRETNHRN ELSTSMSSGG SNQQDDPKID ELRFEYIEEA YSEFNDIIIQ
201: EVDKPDLLEI PFDSDPDIWS FLDTSNSFQQ STANENSSGS RATTEEESDE DEVKKWFKHL ESELGLEEDD NQQQYKEEES SSSSLLKNYE LMIH
101: RTDNEIKNVW HTHLKKRLAQ SSGTADEPAS PCSSDSVSRG KDDKSSHVED SLNRETNHRN ELSTSMSSGG SNQQDDPKID ELRFEYIEEA YSEFNDIIIQ
201: EVDKPDLLEI PFDSDPDIWS FLDTSNSFQQ STANENSSGS RATTEEESDE DEVKKWFKHL ESELGLEEDD NQQQYKEEES SSSSLLKNYE LMIH
Arabidopsis Description
ATMYB63myb domain protein 63 [Source:TAIR;Acc:AT1G79180]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.