Factsheet for Bra003619.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX68004	Canola	nucleus	100.0	100.0
CDX79305	Canola	nucleus	90.26	97.57
Bra035097.1-P	Field mustard	nucleus	76.78	75.93
AT1G79180.2	Thale cress	nucleus	81.27	66.36
Bra026720.1-P	Field mustard	nucleus	64.04	61.29
Bra026048.1-P	Field mustard	nucleus	62.17	58.66
PGSC0003DMT400029235	Potato	nucleus	41.95	46.86
Solyc10g005550.1.1	Tomato	nucleus	42.32	46.5
PGSC0003DMT400089342	Potato	nucleus	40.07	44.4
Bra039344.1-P	Field mustard	nucleus	35.96	40.51
Bra001472.1-P	Field mustard	nucleus	35.21	40.34
Bra015481.1-P	Field mustard	nucleus	37.08	39.29
Bra021708.1-P	Field mustard	nucleus	36.7	39.2
KRH13720	Soybean	nucleus	50.19	38.84
Bra030812.1-P	Field mustard	nucleus	43.45	38.8
VIT_19s0085g00050.t01	Wine grape	nucleus	52.81	38.74
Bra022831.1-P	Field mustard	nucleus	35.58	38.62
Bra018267.1-P	Field mustard	nucleus	34.83	36.76
KRH43737	Soybean	nucleus	52.43	36.27
Bra014929.1-P	Field mustard	nucleus	38.2	35.79
Bra023742.1-P	Field mustard	nucleus	36.7	34.88
Bra001907.1-P	Field mustard	nucleus	37.08	34.62

Protein Annotations

EnsemblPlants:Bra003619.1	EnsemblPlants:Bra003619.1-P	EnsemblPlantsGene:Bra003619	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb
PANTHER:PTHR10641	PANTHER:PTHR10641:SF462	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717
SUPFAM:SSF46689	UniParc:UPI00025413E4	UniProt:M4CHD6	MapMan:15.5.2.1	:	:

Description

AT1G79180 (E=1e-098) ATMYB63, MYB63 | MYB63 (MYB DOMAIN PROTEIN 63); DNA binding / transcription activator/ transcription factor

Coordinates

chrA07:-:14097240..14098216

Molecular Weight (calculated)

30277.9 Da

IEP (calculated)

5.281

GRAVY (calculated)

-0.958

Length

267 amino acids

Sequence
(BLAST)

001: MGKGRAPCCD KTKVKRGPWS PEEDLKLISF IQKFGHENWR SLPKQSGLLR CGKSCRLRWI NYLRPDVKRG NFTAEEEETI IKLHQNYGNK WSRIASQLPG
101: RTDNEIKNVW HTRLKKILVQ SSATSPCSSN SVSCGKEDKS QAEGCLNTKT SQDFTTSVSS GGSYNSNQED DPKIGLLFKY SAFNDIIQEV DKPDLEIPFD
201: SDPDIWSFLD SSNSLQQSGA NEFRAEEESD EDEVKKWFKH MESELELEEA DNEHHKPGTQ ESSSSCS

Best Arabidopsis Sequence Match ( AT1G79180.1 )
(BLAST)

001: MGKGRAPCCD KTKVKRGPWS PEEDIKLISF IQKFGHENWR SLPKQSGLLR CGKSCRLRWI NYLRPDLKRG NFTSEEEETI IKLHHNYGNK WSKIASQLPG
101: RTDNEIKNVW HTHLKKRLAQ SSGTADEPAS PCSSDSVSRG KDDKSSHVED SLNRETNHRN ELSTSMSSGG SNQQDDPKID ELRFEYIEEA YSEFNDIIIQ
201: EVDKPDLLEI PFDSDPDIWS FLDTSNSFQQ STANENSSGS RATTEEESDE DEVKKWFKHL ESELGLEEDD NQQQYKEEES SSSSLLKNYE LMIH

Arabidopsis Description

ATMYB63myb domain protein 63 [Source:TAIR;Acc:AT1G79180]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.