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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX77536 Canola nucleus 98.6 98.6
CDX85074 Canola nucleus 98.25 98.25
Bra001907.1-P Field mustard nucleus 87.72 87.41
AT3G23250.1 Thale cress nucleus 83.51 83.51
Bra023742.1-P Field mustard nucleus 80.7 81.85
Bra021708.1-P Field mustard nucleus 43.86 50.0
Bra018267.1-P Field mustard nucleus 43.16 48.62
Bra015481.1-P Field mustard nucleus 42.46 48.02
Bra022831.1-P Field mustard nucleus 41.05 47.56
Bra039344.1-P Field mustard nucleus 31.93 38.4
Bra026720.1-P Field mustard nucleus 37.54 38.35
Bra003619.1-P Field mustard nucleus 35.79 38.2
Bra001472.1-P Field mustard nucleus 31.23 38.2
Bra035097.1-P Field mustard nucleus 36.14 38.15
Bra026048.1-P Field mustard nucleus 35.09 35.34
Bra030812.1-P Field mustard nucleus 33.68 32.11
Protein Annotations
EnsemblPlants:Bra014929.1EnsemblPlants:Bra014929.1-PEnsemblPlantsGene:Bra014929Gene3D:1.10.10.60GO:GO:0003674GO:GO:0003676
GO:GO:0003677GO:GO:0005488InterPro:Homeobox-like_sfInterPro:IPR017930InterPro:Myb_domInterPro:SANT/Myb
PANTHER:PTHR10641PANTHER:PTHR10641:SF695PFAM:PF00249PFscan:PS51294SEG:segSMART:SM00717
SUPFAM:SSF46689UniParc:UPI0002540EC5UniProt:M4DEK7MapMan:15.5.2.1::
Description
AT3G23250 (E=5e-131) MYB15, ATY19, ATMYB15 | MYB15 (MYB DOMAIN PROTEIN 15); DNA binding / transcription factor
Coordinates
chrA07:-:5144535..5145686
Molecular Weight (calculated)
32208.6 Da
IEP (calculated)
5.100
GRAVY (calculated)
-0.681
Length
285 amino acids
Sequence
(BLAST)
001: MGRAPCCEKM GLNRGPWTPE EDQILISFIH KHGHSNWRAL PKQAGLLRCG KSCRLRWMNY LKPDIKRGNF TKEEEDAIIS LHQILGNRWS AIAAKLPGRT
101: DNEIKNVWHT HLKKRLEDYQ LAKPKTSNTK KATKPKSQSV PTKLNSTRCE LEFLNSSNPS FESLFSASPS TSDAVSSVTL MSHEGHNNEA KMDNKSGDIN
201: IADQDCSSFE IFGADIDESF WNEALYSQDE SNYALNLDVA GFDEIQQEFQ QLGPDENEMV FDSEMDFWFD VLARTGGEQD LLAGL
Best Arabidopsis Sequence Match ( AT3G23250.1 )
(BLAST)
001: MGRAPCCEKM GLKRGPWTPE EDQILVSFIL NHGHSNWRAL PKQAGLLRCG KSCRLRWMNY LKPDIKRGNF TKEEEDAIIS LHQILGNRWS AIAAKLPGRT
101: DNEIKNVWHT HLKKRLEDYQ PAKPKTSNKK KGTKPKSESV ITSSNSTRSE SELADSSNPS GESLFSTSPS TSEVSSMTLI SHDGYSNEIN MDNKPGDIST
201: IDQECVSFET FGADIDESFW KETLYSQDEH NYVSNDLEVA GLVEIQQEFQ NLGSANNEMI FDSEMDFWFD VLARTGGEQD LLAGL
Arabidopsis Description
MYB15Transcription factor MYB15 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTC4]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.