Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH68789 | Soybean | nucleus | 89.62 | 90.91 |
| GSMUA_Achr4P18180_001 | Banana | nucleus | 45.28 | 65.75 |
| KRH34142 | Soybean | nucleus | 50.94 | 51.43 |
| Solyc05g055030.1.1 | Tomato | nucleus | 50.0 | 48.62 |
| PGSC0003DMT400060168 | Potato | nucleus | 50.0 | 48.18 |
| GSMUA_Achr1P09180_001 | Banana | nucleus | 50.0 | 46.09 |
| TraesCS6B01G257000.1 | Wheat | nucleus | 52.36 | 45.68 |
| HORVU6Hr1G058580.1 | Barley | nucleus | 52.36 | 45.68 |
| TraesCS6A01G224400.1 | Wheat | nucleus | 51.89 | 45.64 |
| TraesCS6D01G211100.1 | Wheat | nucleus | 53.77 | 45.42 |
| TraesCS6D01G210500.1 | Wheat | nucleus | 51.42 | 45.42 |
| GSMUA_Achr5P03920_001 | Banana | nucleus | 51.42 | 45.42 |
| GSMUA_Achr4P21910_001 | Banana | nucleus | 46.23 | 44.75 |
| TraesCS6D01G211200.1 | Wheat | nucleus | 51.42 | 44.67 |
| HORVU6Hr1G058640.1 | Barley | nucleus | 51.42 | 44.67 |
| TraesCS6A01G224300.1 | Wheat | nucleus | 52.36 | 44.4 |
| KRH56057 | Soybean | nucleus | 33.49 | 44.38 |
| TraesCS6D01G210800.1 | Wheat | nucleus | 45.75 | 44.29 |
| TraesCS6B01G257300.1 | Wheat | nucleus | 52.83 | 44.27 |
| TraesCS6D01G210900.1 | Wheat | nucleus | 50.47 | 44.21 |
| TraesCS6A01G224000.1 | Wheat | nucleus | 53.3 | 44.14 |
| TraesCS6B01G257200.1 | Wheat | nucleus | 52.36 | 43.7 |
| TraesCS6A01G224100.1 | Wheat | nucleus | 52.83 | 43.58 |
| TraesCS6A01G224200.1 | Wheat | nucleus | 51.89 | 43.48 |
| TraesCS6D01G211400.1 | Wheat | nucleus | 51.89 | 43.31 |
| TraesCS6B01G257100.1 | Wheat | nucleus | 51.42 | 43.25 |
| Os02t0624300-01 | Rice | nucleus | 52.36 | 43.02 |
| KRH69121 | Soybean | nucleus | 53.3 | 42.8 |
| Zm00001d017268_P001 | Maize | nucleus | 49.06 | 42.62 |
| KRH31704 | Soybean | nucleus | 52.83 | 42.42 |
| EES07173 | Sorghum | nucleus | 51.42 | 42.25 |
| GSMUA_Achr5P14600_001 | Banana | nucleus | 45.28 | 41.92 |
| GSMUA_Achr11P... | Banana | nucleus | 46.23 | 41.7 |
| EES12516 | Sorghum | nucleus | 53.3 | 41.54 |
| Zm00001d025864_P001 | Maize | nucleus | 53.77 | 41.16 |
| KRG92419 | Soybean | nucleus | 52.36 | 40.81 |
| Zm00001d051149_P001 | Maize | nucleus | 49.53 | 40.38 |
| KRH22481 | Soybean | nucleus | 42.92 | 40.09 |
| KRH34387 | Soybean | nucleus | 51.89 | 40.0 |
| Zm00001d003064_P001 | Maize | nucleus | 53.77 | 38.78 |
| HORVU6Hr1G058620.1 | Barley | nucleus | 52.83 | 38.62 |
| HORVU6Hr1G058630.3 | Barley | nucleus, plastid | 52.83 | 38.49 |
| KRH56060 | Soybean | nucleus | 41.04 | 37.83 |
| KRH25458 | Soybean | nucleus | 41.51 | 37.61 |
| KRH32183 | Soybean | nucleus | 41.98 | 37.55 |
| Zm00001d032694_P001 | Maize | nucleus | 47.64 | 37.13 |
| KRG95664 | Soybean | nucleus | 49.06 | 35.74 |
| GSMUA_Achr6P31520_001 | Banana | nucleus | 41.04 | 35.66 |
| KRH67378 | Soybean | nucleus | 49.06 | 35.37 |
| Os10t0478300-01 | Rice | nucleus | 45.28 | 34.78 |
| EER91482 | Sorghum | nucleus | 48.11 | 34.46 |
| TraesCS1A01G155300.1 | Wheat | nucleus | 42.45 | 34.22 |
| TraesCS1D01G154000.1 | Wheat | nucleus | 42.45 | 34.22 |
| TraesCS2B01G399200.1 | Wheat | nucleus | 50.94 | 34.18 |
| Zm00001d014029_P001 | Maize | nucleus | 44.81 | 34.17 |
| KRH56061 | Soybean | nucleus | 38.68 | 33.88 |
| TraesCS2D01G378400.2 | Wheat | nucleus | 50.47 | 33.86 |
| TraesCS1B01G172500.1 | Wheat | nucleus | 41.51 | 33.85 |
| GSMUA_Achr4P28850_001 | Banana | nucleus | 42.45 | 33.09 |
| TraesCS6A01G265300.1 | Wheat | nucleus | 40.09 | 32.44 |
| TraesCS2A01G381900.2 | Wheat | nucleus | 50.0 | 32.42 |
| KRH56056 | Soybean | nucleus | 35.85 | 32.34 |
| GSMUA_Achr11P... | Banana | nucleus | 45.75 | 32.01 |
| GSMUA_Achr2P18090_001 | Banana | nucleus | 44.81 | 31.35 |
| KRH25468 | Soybean | nucleus | 34.43 | 31.2 |
| GSMUA_Achr11P... | Banana | nucleus | 41.98 | 31.01 |
| GSMUA_Achr5P18600_001 | Banana | nucleus | 47.64 | 30.33 |
| GSMUA_Achr5P03520_001 | Banana | nucleus | 42.92 | 30.03 |
| KRH26874 | Soybean | nucleus | 35.38 | 29.88 |
| GSMUA_Achr4P27350_001 | Banana | nucleus | 41.04 | 29.0 |
| TraesCS2D01G444200.1 | Wheat | nucleus | 42.92 | 28.71 |
| Zm00001d026204_P001 | Maize | nucleus | 44.34 | 28.57 |
| Os02t0695200-01 | Rice | nucleus | 43.4 | 27.06 |
| Zm00001d051520_P001 | Maize | nucleus | 42.45 | 26.47 |
| KRH56058 | Soybean | nucleus | 39.62 | 26.42 |
| Os04t0517100-01 | Rice | nucleus | 22.17 | 26.4 |
| TraesCS6B01G292500.1 | Wheat | nucleus | 41.04 | 26.28 |
| KRH26875 | Soybean | nucleus | 38.68 | 26.2 |
| TraesCS2B01G466400.1 | Wheat | nucleus | 43.87 | 26.2 |
| TraesCS6D01G249200.1 | Wheat | nucleus | 41.51 | 26.19 |
| KRH56059 | Soybean | nucleus | 39.62 | 25.93 |
| KRH25461 | Soybean | nucleus | 37.26 | 25.9 |
| Os04t0594100-01 | Rice | nucleus | 44.34 | 25.34 |
| KRH13720 | Soybean | nucleus | 41.04 | 25.22 |
| TraesCS2B01G466500.1 | Wheat | nucleus | 42.92 | 25.21 |
| TraesCS2D01G444300.1 | Wheat | nucleus | 42.92 | 25.07 |
| TraesCS2A01G445500.1 | Wheat | nucleus | 42.92 | 24.8 |
| EES12768 | Sorghum | nucleus | 43.4 | 24.47 |
| Zm00001d026203_P001 | Maize | nucleus | 43.87 | 24.35 |
| KRH25459 | Soybean | nucleus | 34.43 | 24.25 |
| EES05685 | Sorghum | nucleus | 43.4 | 23.71 |
| Zm00001d002476_P001 | Maize | nucleus | 44.81 | 23.46 |
| KRH43737 | Soybean | nucleus | 41.51 | 22.8 |
| HORVU6Hr1G067380.1 | Barley | nucleus | 40.57 | 19.5 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:102663040 | MapMan:15.5.2.1 | EMBL:ACUP02012172 | EnsemblPlantsGene:GLYMA_19G248100 | GO:GO:0000981 |
| GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 |
| GO:GO:0044212 | InterPro:Homeobox-like_sf | UniProt:I1NCD2 | InterPro:IPR017930 | EnsemblPlants:KRG97042 | ProteinID:KRG97042 |
| ProteinID:KRG97042.1 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF497 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI00023DE353 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr19:+:49417748..49419050
Molecular Weight (calculated)
23713.2 Da
IEP (calculated)
9.486
GRAVY (calculated)
-0.533
Length
212 amino acids
Sequence
(BLAST)
(BLAST)
001: MTRTPCCERM GLKKGPWTAE EDQILVSHIQ QYGHGNWRAL PKQAGLLRCG KSCRLRWINY LRPDIKRGKF SKEEEHTILK LHGILGNRWS AIAASLPGRT
101: DNEIKNFWHT HLKKRIQKSG VHNGNASSRI LQEAQANTSL DASSAASSTV TANVMIANYG LPVRNINPPI AGFYGAVSSD TFGEIEDNHG SCQLSEEMEF
201: WYNIFIKSGQ TS
101: DNEIKNFWHT HLKKRIQKSG VHNGNASSRI LQEAQANTSL DASSAASSTV TANVMIANYG LPVRNINPPI AGFYGAVSSD TFGEIEDNHG SCQLSEEMEF
201: WYNIFIKSGQ TS
001: MGRRPCCEKI GLKKGPWSAE EDRILINYIS LHGHPNWRAL PKLAGLLRCG KSCRLRWINY LRPDIKRGNF TPHEEDTIIS LHQLLGNRWS AIAAKLPGRT
101: DNEIKNVWHT HLKKRLHHSQ DQNNKEDFVS TTAAEMPTSP QQQSSSSADI SAITTLGNNN DISNSNKDSA TSSEDVLAII DESFWSEVVL MDCDISGNEK
201: NEKKIENWEG SLDRNDKGYN HDMEFWFDHL TSSSCIIGEM SDISEF
101: DNEIKNVWHT HLKKRLHHSQ DQNNKEDFVS TTAAEMPTSP QQQSSSSADI SAITTLGNNN DISNSNKDSA TSSEDVLAII DESFWSEVVL MDCDISGNEK
201: NEKKIENWEG SLDRNDKGYN HDMEFWFDHL TSSSCIIGEM SDISEF
Arabidopsis Description
ATMYB13Transcription factor MYB13 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNC9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.