Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P18180_001 | Banana | nucleus | 33.82 | 63.01 |
| VIT_05s0049g01010.t01 | Wine grape | nucleus | 32.35 | 61.11 |
| PGSC0003DMT400034263 | Potato | mitochondrion | 16.54 | 52.94 |
| KRH56057 | Soybean | nucleus | 27.94 | 47.5 |
| GSMUA_Achr11P... | Banana | nucleus | 49.26 | 46.69 |
| GSMUA_Achr5P03520_001 | Banana | nucleus | 51.84 | 46.53 |
| TraesCS6A01G265300.1 | Wheat | nucleus | 44.12 | 45.8 |
| GSMUA_Achr2P18090_001 | Banana | nucleus | 50.74 | 45.54 |
| GSMUA_Achr6P31520_001 | Banana | nucleus | 40.81 | 45.49 |
| Solyc05g055030.1.1 | Tomato | nucleus | 36.4 | 45.41 |
| GSMUA_Achr1P09180_001 | Banana | nucleus | 37.87 | 44.78 |
| GSMUA_Achr4P27350_001 | Banana | nucleus | 49.26 | 44.67 |
| PGSC0003DMT400060168 | Potato | nucleus | 35.66 | 44.09 |
| AT1G06180.1 | Thale cress | nucleus | 39.71 | 43.9 |
| GSMUA_Achr11P... | Banana | nucleus | 37.5 | 43.4 |
| KRH34142 | Soybean | nucleus | 33.46 | 43.33 |
| KRH68789 | Soybean | nucleus | 33.09 | 43.06 |
| KRG97042 | Soybean | nucleus | 33.09 | 42.45 |
| GSMUA_Achr4P21910_001 | Banana | nucleus | 33.82 | 42.01 |
| Solyc06g083900.2.1 | Tomato | nucleus | 39.34 | 41.96 |
| PGSC0003DMT400051682 | Potato | nucleus | 39.71 | 41.86 |
| GSMUA_Achr5P03920_001 | Banana | nucleus | 36.76 | 41.67 |
| Bra021708.1-P | Field mustard | nucleus | 37.87 | 41.2 |
| TraesCS2D01G444200.1 | Wheat | nucleus | 47.79 | 41.01 |
| Bra015481.1-P | Field mustard | nucleus | 37.87 | 40.87 |
| PGSC0003DMT400034878 | Potato | nucleus | 37.87 | 40.87 |
| GSMUA_Achr5P14600_001 | Banana | nucleus | 34.19 | 40.61 |
| Os02t0695200-01 | Rice | nucleus | 50.74 | 40.59 |
| Bra018267.1-P | Field mustard | nucleus | 37.5 | 40.32 |
| Bra022831.1-P | Field mustard | nucleus | 36.4 | 40.24 |
| AT2G31180.1 | Thale cress | nucleus | 36.76 | 40.16 |
| VIT_07s0005g03340.t01 | Wine grape | nucleus | 39.71 | 40.15 |
| VIT_05s0049g01020.t01 | Wine grape | nucleus | 37.13 | 39.92 |
| KRH22481 | Soybean | nucleus | 33.09 | 39.65 |
| Solyc06g053610.2.1 | Tomato | nucleus | 38.6 | 39.62 |
| TraesCS6D01G249200.1 | Wheat | nucleus | 48.9 | 39.58 |
| PGSC0003DMT400042007 | Potato | nucleus | 38.97 | 39.55 |
| KRH25458 | Soybean | nucleus | 33.82 | 39.32 |
| VIT_12s0134g00480.t01 | Wine grape | nucleus | 37.13 | 39.3 |
| PGSC0003DMT400044362 | Potato | nucleus | 38.6 | 39.18 |
| Solyc09g090130.2.1 | Tomato | nucleus | 38.6 | 39.18 |
| KRH56060 | Soybean | nucleus | 33.09 | 39.13 |
| Zm00001d051520_P001 | Maize | nucleus | 48.9 | 39.12 |
| Solyc03g005570.2.1 | Tomato | nucleus | 36.03 | 39.04 |
| KRH31704 | Soybean | nucleus | 37.87 | 39.02 |
| KRH69121 | Soybean | nucleus | 37.87 | 39.02 |
| TraesCS6B01G292500.1 | Wheat | nucleus | 47.43 | 38.97 |
| Zm00001d026204_P001 | Maize | nucleus | 46.69 | 38.6 |
| KRG92419 | Soybean | nucleus | 38.24 | 38.24 |
| Solyc12g005640.1.1 | Tomato | nucleus | 32.72 | 38.2 |
| KRH56061 | Soybean | nucleus | 33.82 | 38.02 |
| Os04t0594100-01 | Rice | nucleus | 51.84 | 38.01 |
| KRH32183 | Soybean | nucleus | 33.09 | 37.97 |
| PGSC0003DMT400067322 | Potato | nucleus | 33.82 | 37.55 |
| PGSC0003DMT400067318 | Potato | nucleus | 33.46 | 37.45 |
| Solyc07g053240.2.1 | Tomato | nucleus | 34.19 | 37.35 |
| PGSC0003DMT400067321 | Potato | nucleus | 33.46 | 37.14 |
| Solyc07g053230.2.1 | Tomato | nucleus | 34.19 | 37.05 |
| TraesCS2D01G444300.1 | Wheat | nucleus | 49.26 | 36.91 |
| PGSC0003DMT400035748 | Potato | nucleus | 31.25 | 36.8 |
| KRH34387 | Soybean | nucleus | 37.13 | 36.73 |
| Solyc07g054960.1.1 | Tomato | nucleus | 29.04 | 36.57 |
| TraesCS2B01G466500.1 | Wheat | nucleus | 48.53 | 36.57 |
| EES12768 | Sorghum | nucleus | 50.37 | 36.44 |
| PGSC0003DMT400097096 | Potato | nucleus | 28.31 | 36.15 |
| KRG95664 | Soybean | nucleus | 38.6 | 36.08 |
| TraesCS2A01G445500.1 | Wheat | nucleus | 48.53 | 35.97 |
| Solyc07g055000.1.1 | Tomato | nucleus | 31.99 | 35.95 |
| KRH67378 | Soybean | nucleus | 38.6 | 35.71 |
| VIT_12s0134g00490.t01 | Wine grape | nucleus | 33.09 | 35.71 |
| TraesCS2B01G466400.1 | Wheat | nucleus | 46.32 | 35.49 |
| KRH26874 | Soybean | nucleus | 32.35 | 35.06 |
| EES05685 | Sorghum | nucleus | 50.0 | 35.05 |
| PGSC0003DMT400097604 | Potato | nucleus | 26.84 | 34.76 |
| KRH56056 | Soybean | nucleus | 29.78 | 34.47 |
| Zm00001d026203_P001 | Maize | nucleus | 48.16 | 34.29 |
| KRH25468 | Soybean | nucleus | 29.41 | 34.19 |
| GSMUA_Achr11P... | Banana | nucleus | 37.87 | 33.99 |
| PGSC0003DMT400039029 | Potato | nucleus | 29.78 | 33.33 |
| GSMUA_Achr5P18600_001 | Banana | nucleus | 40.44 | 33.03 |
| Solyc03g093940.1.1 | Tomato | nucleus | 26.1 | 32.72 |
| Zm00001d002476_P001 | Maize | nucleus | 48.53 | 32.59 |
| VIT_00s0203g00170.t01 | Wine grape | nucleus | 31.62 | 32.09 |
| Solyc06g033870.1.1 | Tomato | nucleus | 29.04 | 31.98 |
| PGSC0003DMT400093355 | Potato | nucleus | 28.31 | 31.95 |
| KRH26875 | Soybean | nucleus | 36.03 | 31.31 |
| KRH25461 | Soybean | nucleus | 34.93 | 31.15 |
| Solyc06g034000.1.1 | Tomato | nucleus | 26.84 | 30.93 |
| KRH56059 | Soybean | nucleus | 36.03 | 30.25 |
| KRH56058 | Soybean | nucleus | 35.29 | 30.19 |
| PGSC0003DMT400051510 | Potato | nucleus | 26.84 | 30.04 |
| PGSC0003DMT400070912 | Potato | nucleus | 28.68 | 30.0 |
| PGSC0003DMT400051513 | Potato | nucleus | 27.21 | 29.96 |
| HORVU6Hr1G067380.1 | Barley | nucleus | 47.79 | 29.48 |
| Solyc03g093930.2.1 | Tomato | nucleus | 26.47 | 29.39 |
| Solyc03g093890.2.1 | Tomato | nucleus | 26.1 | 28.06 |
| PGSC0003DMT400086165 | Potato | nucleus | 29.04 | 27.53 |
| PGSC0003DMT400021498 | Potato | nucleus | 24.26 | 27.5 |
| KRH25459 | Soybean | nucleus | 29.41 | 26.58 |
| PGSC0003DMT400021503 | Potato | nucleus | 16.91 | 23.96 |
| PGSC0003DMT400021501 | Potato | nucleus | 17.28 | 23.86 |
| Solyc07g054980.1.1 | Tomato | nucleus | 34.19 | 19.87 |
| CDX73801 | Canola | nucleus | 3.31 | 13.43 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr4P28850_001 | EnsemblPlants:GSMUA_Achr4T28850_001 | EnsemblPlantsGene:GSMUA_Achr4G28850_001 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF462 | PFAM:PF00249 | PFscan:PS51294 | SMART:SM00717 | SUPFAM:SSF46689 |
| UniParc:UPI000295CDA0 | UniProt:M0SSZ7 | MapMan:15.5.2.1 | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G28850_001]
Coordinates
chr4:-:27084708..27085684
Molecular Weight (calculated)
30712.0 Da
IEP (calculated)
4.694
GRAVY (calculated)
-0.715
Length
272 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRGRAPCCE KIGLNKGTWT EEEDMKLIAY IHKYGHQNWR ALPKLAGLLR CGKSCRLRWT NYLRPDIKRG NFTKDEEDTI IKLHALLGNK WSKIASFLPG
101: RTDNEIKNVW NTHLKKRAAS GEQQPVTNGA STSTGDRMAG AIEIPVDPTV DMFVILDDAL STSMQSNEME DSVFLETLGV RQDSLWTSPQ KQSRGSVASV
201: GTDGPSIPDV RQPEACEEAD GTRRDGQREE WLDYLEKELG LRDEGEAWDR WDEMEGDLVA TFLQDDIFSP YD
101: RTDNEIKNVW NTHLKKRAAS GEQQPVTNGA STSTGDRMAG AIEIPVDPTV DMFVILDDAL STSMQSNEME DSVFLETLGV RQDSLWTSPQ KQSRGSVASV
201: GTDGPSIPDV RQPEACEEAD GTRRDGQREE WLDYLEKELG LRDEGEAWDR WDEMEGDLVA TFLQDDIFSP YD
001: MGKGRAPCCD KTKVKRGPWS HDEDLKLISF IHKNGHENWR SLPKQAGLLR CGKSCRLRWI NYLRPDVKRG NFSAEEEDTI IKLHQSFGNK WSKIASKLPG
101: RTDNEIKNVW HTHLKKRLSS ETNLNADEAG SKGSLNEEEN SQESSPNASM SFAGSNISSK DDDAQISQMF EHILTYSEFT GMLQEVDKPE LLEMPFDLDP
201: DIWSFIDGSD SFQQPENRAL QESEEDEVDK WFKHLESELG LEENDNQQQQ QQHKQGTEDE HSSSLLESYE LLIH
101: RTDNEIKNVW HTHLKKRLSS ETNLNADEAG SKGSLNEEEN SQESSPNASM SFAGSNISSK DDDAQISQMF EHILTYSEFT GMLQEVDKPE LLEMPFDLDP
201: DIWSFIDGSD SFQQPENRAL QESEEDEVDK WFKHLESELG LEENDNQQQQ QQHKQGTEDE HSSSLLESYE LLIH
Arabidopsis Description
MYB58Transcription factor MYB58 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA47]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.