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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400067321 Potato nucleus 91.24 93.47
Solyc07g053240.2.1 Tomato nucleus 87.25 87.95
Solyc07g055000.1.1 Tomato nucleus 82.87 85.95
PGSC0003DMT400067322 Potato nucleus 83.27 85.31
GSMUA_Achr4P18180_001 Banana nucleus 32.27 55.48
Solyc12g005640.1.1 Tomato nucleus 45.42 48.93
KRH56060 Soybean nucleus 42.23 46.09
VIT_12s0134g00480.t01 Wine grape nucleus 46.61 45.53
KRH22481 Soybean nucleus 39.84 44.05
KRH25458 Soybean nucleus 41.04 44.02
Solyc07g054980.1.1 Tomato nucleus 76.89 41.24
KRH56061 Soybean nucleus 39.44 40.91
GSMUA_Achr5P14600_001 Banana nucleus 37.05 40.61
Solyc07g054960.1.1 Tomato nucleus 34.66 40.28
KRH26874 Soybean nucleus 39.44 39.44
GSMUA_Achr11P... Banana nucleus 36.65 39.15
Solyc05g055030.1.1 Tomato nucleus 33.47 38.53
GSMUA_Achr4P21910_001 Banana nucleus 33.47 38.36
GSMUA_Achr1P09180_001 Banana nucleus 35.06 38.26
KRH25461 Soybean nucleus 45.82 37.7
Solyc03g093940.1.1 Tomato nucleus 32.27 37.33
TraesCS6A01G224400.1 Wheat nucleus 35.06 36.51
Solyc03g005570.2.1 Tomato nucleus 36.26 36.26
GSMUA_Achr5P03920_001 Banana nucleus 34.66 36.25
TraesCS6D01G210500.1 Wheat nucleus 34.66 36.25
Solyc10g005550.1.1 Tomato nucleus 35.06 36.21
Solyc09g090130.2.1 Tomato nucleus 38.65 36.19
TraesCS6D01G210800.1 Wheat nucleus 31.47 36.07
Zm00001d017268_P001 Maize nucleus 35.06 36.07
HORVU6Hr1G058580.1 Barley nucleus 34.66 35.8
TraesCS6B01G257000.1 Wheat nucleus 34.66 35.8
Solyc06g053610.2.1 Tomato nucleus 37.45 35.47
KRH26875 Soybean nucleus 44.22 35.46
TraesCS6B01G257200.1 Wheat nucleus 35.86 35.43
HORVU6Hr1G058640.1 Barley nucleus 34.26 35.25
TraesCS6D01G210900.1 Wheat nucleus 33.86 35.12
TraesCS6D01G211100.1 Wheat nucleus 35.06 35.06
TraesCS6D01G211400.1 Wheat nucleus 35.46 35.04
KRH56058 Soybean nucleus 44.22 34.91
Os02t0624300-01 Rice nucleus 35.86 34.88
GSMUA_Achr6P31520_001 Banana nucleus 33.86 34.84
TraesCS6D01G211200.1 Wheat nucleus 33.86 34.84
TraesCS6B01G257300.1 Wheat nucleus 35.06 34.78
TraesCS6B01G257100.1 Wheat nucleus 34.66 34.52
Solyc06g083900.2.1 Tomato nucleus 35.06 34.51
EES07173 Sorghum nucleus 35.46 34.5
TraesCS6A01G224300.1 Wheat nucleus 34.26 34.4
TraesCS6A01G224200.1 Wheat nucleus 34.66 34.39
GSMUA_Achr4P28850_001 Banana nucleus 37.05 34.19
TraesCS6A01G224000.1 Wheat nucleus 34.66 33.98
Solyc03g093930.2.1 Tomato nucleus 33.07 33.88
KRH56059 Soybean nucleus 43.43 33.64
TraesCS6A01G224100.1 Wheat nucleus 34.26 33.46
EES12516 Sorghum nucleus 35.86 33.09
Zm00001d051149_P001 Maize nucleus 34.26 33.08
TraesCS1A01G155300.1 Wheat nucleus 34.26 32.7
Zm00001d025864_P001 Maize nucleus 35.46 32.13
TraesCS6A01G265300.1 Wheat nucleus 33.47 32.06
Solyc03g093890.2.1 Tomato nucleus 32.27 32.02
Zm00001d003064_P001 Maize nucleus 37.45 31.97
TraesCS1D01G154000.1 Wheat nucleus 33.47 31.94
KRH25459 Soybean nucleus 38.25 31.89
Zm00001d032694_P001 Maize nucleus 34.26 31.62
TraesCS1B01G172500.1 Wheat nucleus 32.67 31.54
Os10t0478300-01 Rice nucleus 34.66 31.52
Solyc06g034000.1.1 Tomato nucleus 29.48 31.36
Zm00001d014029_P001 Maize nucleus 34.26 30.94
HORVU6Hr1G058620.1 Barley nucleus 35.46 30.69
Solyc06g033870.1.1 Tomato nucleus 29.88 30.36
HORVU6Hr1G058630.3 Barley nucleus, plastid 35.06 30.24
EER91482 Sorghum nucleus 35.06 29.73
GSMUA_Achr5P03520_001 Banana nucleus 35.86 29.7
GSMUA_Achr4P27350_001 Banana nucleus 35.46 29.67
GSMUA_Achr11P... Banana nucleus 33.07 28.92
GSMUA_Achr2P18090_001 Banana nucleus 34.66 28.71
TraesCS2D01G378400.2 Wheat nucleus 35.46 28.16
TraesCS2B01G399200.1 Wheat nucleus 35.46 28.16
Zm00001d026204_P001 Maize nucleus 36.65 27.96
TraesCS2D01G444200.1 Wheat nucleus 35.06 27.76
GSMUA_Achr11P... Banana nucleus 33.47 27.72
GSMUA_Achr5P18600_001 Banana nucleus 36.65 27.63
TraesCS2A01G381900.2 Wheat nucleus 35.46 27.22
Zm00001d051520_P001 Maize nucleus 35.86 26.47
TraesCS6B01G292500.1 Wheat nucleus 34.26 25.98
TraesCS6D01G249200.1 Wheat nucleus 34.66 25.89
Os02t0695200-01 Rice nucleus 33.86 25.0
TraesCS2D01G444300.1 Wheat nucleus 35.06 24.24
TraesCS2B01G466400.1 Wheat nucleus 34.26 24.23
EES12768 Sorghum nucleus 36.26 24.2
TraesCS2B01G466500.1 Wheat nucleus 34.66 24.1
Zm00001d026203_P001 Maize nucleus 36.65 24.08
Os04t0594100-01 Rice nucleus 35.06 23.72
TraesCS2A01G445500.1 Wheat nucleus 34.66 23.71
EES05685 Sorghum nucleus 35.86 23.2
Zm00001d002476_P001 Maize nucleus 36.65 22.72
Os04t0517100-01 Rice nucleus 15.54 21.91
HORVU6Hr1G067380.1 Barley nucleus 33.47 19.05
Protein Annotations
Gene3D:1.10.10.60MapMan:15.5.2.1GO:GO:0000981GO:GO:0001135GO:GO:0003674GO:GO:0003676
GO:GO:0003677GO:GO:0003700GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005634GO:GO:0006139GO:GO:0006357GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0030154GO:GO:0043565GO:GO:0044212InterPro:Homeobox-like_sfInterPro:IPR017930
UniProt:K4CFM1InterPro:Myb_domPFAM:PF00249PFscan:PS51294PANTHER:PTHR10641PANTHER:PTHR10641:SF541
InterPro:SANT/MybSMART:SM00717SUPFAM:SSF46689EnsemblPlantsGene:Solyc07g053230.2EnsemblPlants:Solyc07g053230.2.1UniParc:UPI000276BE1B
SEG:seg:::::
Description
No Description!
Coordinates
chr7:+:61699380..61700488
Molecular Weight (calculated)
29140.9 Da
IEP (calculated)
7.468
GRAVY (calculated)
-0.907
Length
251 amino acids
Sequence
(BLAST)
001: MVRTPCRDEN GRKKGTWTPE EDRKLAAYIT KYGSWNWRQL PKYAGLARCG KSCRLRWMNY LRPNVKRGNY TKEEDEIILN LHAQLGNKWS AIAIHLPGRS
101: DNEIKNHWHT TLKKRAHYNS SEVSKKCNKK RSESNITKRK SNVENQNASA NNINNNMHEN IVLESSEWSP NESSSEALSS IDYQQDIFQE ELANLEEITS
201: GSFWTQPFEV DTKIDFVAPP IDYCGLVCPP SPFIPHEFLS SFDFDDCNNY W
Best Arabidopsis Sequence Match ( AT2G31180.1 )
(BLAST)
001: MGRAPCCEKM GVKRGPWTPE EDQILINYIH LYGHSNWRAL PKHAGLLRCG KSCRLRWINY LRPDIKRGNF TPQEEQTIIN LHESLGNRWS AIAAKLPGRT
101: DNEIKNVWHT HLKKRLSKNL NNGGDTKDVN GINETTNEDK GSVIVDTASL QQFSNSITTF DISNDNKDDI MSYEDISALI DDSFWSDVIS VDNSNKNEKK
201: IEDWEGLIDR NSKKCSYSNS KLYNDDMEFW FDVFTSNRRI EEFSDIPEF
Arabidopsis Description
MYB14Transcription factor MYB14 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJX8]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.