Factsheet for Os02t0695200-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0267900-01
Os01t0279300-01
Os01t0810300-01
Os03t0319300-01
Os03t0743500-02
Os05t0491000-01
Os05t0491100-01
Os07t0687200-02
Os12t0603800-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G31180.1	Os01t0267900-01	AT2G41090.1	17360592
AT2G31180.1	Os01t0279300-01	AT2G41090.1	17360592
AT2G31180.1	Os01t0810300-01	AT2G41090.1	17360592
AT2G31180.1	Os03t0319300-01	AT2G41090.1	17360592
AT2G31180.1	Os05t0491000-01	AT2G41090.1	17360592
AT2G31180.1	Os05t0491100-01	AT2G41090.1	17360592
AT2G31180.1	Os07t0687200-02	AT2G41090.1	17360592
AT2G31180.1	Os12t0603800-00	AT2G41090.1	17360592
AT2G31180.1	Os01t0267900-01	AT2G41100.1	17360592
AT2G31180.1	Os01t0279300-01	AT2G41100.1	17360592
AT2G31180.1	Os01t0810300-01	AT2G41100.1	17360592
AT2G31180.1	Os03t0319300-01	AT2G41100.1	17360592
AT2G31180.1	Os05t0491000-01	AT2G41100.1	17360592
AT2G31180.1	Os05t0491100-01	AT2G41100.1	17360592
AT2G31180.1	Os07t0687200-02	AT2G41100.1	17360592
AT2G31180.1	Os12t0603800-00	AT2G41100.1	17360592
AT2G31180.1	Os03t0743500-02	AT4G14640.1	17360592
AT2G31180.1	Os01t0267900-01	AT5G21274.1	17360592
AT2G31180.1	Os01t0279300-01	AT5G21274.1	17360592
AT2G31180.1	Os01t0810300-01	AT5G21274.1	17360592
AT2G31180.1	Os03t0319300-01	AT5G21274.1	17360592
AT2G31180.1	Os05t0491000-01	AT5G21274.1	17360592
AT2G31180.1	Os05t0491100-01	AT5G21274.1	17360592
AT2G31180.1	Os07t0687200-02	AT5G21274.1	17360592
AT2G31180.1	Os12t0603800-00	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G265300.1	Wheat	nucleus	51.47	66.79
TraesCS6D01G249200.1	Wheat	nucleus	63.82	64.58
Zm00001d051520_P001	Maize	nucleus	63.82	63.82
TraesCS6B01G292500.1	Wheat	nucleus	61.76	63.44
VIT_05s0049g01010.t01	Wine grape	nucleus	26.47	62.5
EES05685	Sorghum	nucleus	64.12	56.19
Os04t0594100-01	Rice	nucleus	60.29	55.26
PGSC0003DMT400034263	Potato	mitochondrion	13.24	52.94
GSMUA_Achr11P...	Banana	nucleus	44.41	52.61
GSMUA_Achr2P18090_001	Banana	nucleus	46.18	51.82
GSMUA_Achr4P28850_001	Banana	nucleus	40.59	50.74
GSMUA_Achr5P03520_001	Banana	nucleus	44.71	50.16
HORVU6Hr1G067380.1	Barley	nucleus	63.24	48.75
GSMUA_Achr4P27350_001	Banana	nucleus	42.35	48.0
KRH56057	Soybean	nucleus	22.06	46.88
GSMUA_Achr6P31520_001	Banana	nucleus	32.65	45.49
Os02t0624300-01	Rice	nucleus	33.53	44.19
PGSC0003DMT400060168	Potato	nucleus	28.53	44.09
Solyc05g055030.1.1	Tomato	nucleus	28.24	44.04
KRH68789	Soybean	nucleus	26.76	43.54
AT1G06180.1	Thale cress	nucleus	31.47	43.5
KRG97042	Soybean	nucleus	27.06	43.4
VIT_05s0049g01020.t01	Wine grape	nucleus	31.76	42.69
KRH34142	Soybean	nucleus	26.18	42.38
Solyc06g083900.2.1	Tomato	nucleus	31.47	41.96
PGSC0003DMT400051682	Potato	nucleus	31.47	41.47
AT2G31180.1	Thale cress	nucleus	30.0	40.96
KRH31704	Soybean	nucleus	31.76	40.91
KRH69121	Soybean	nucleus	31.76	40.91
Bra015481.1-P	Field mustard	nucleus	30.29	40.87
Bra021708.1-P	Field mustard	nucleus	30.0	40.8
Os10t0478300-01	Rice	nucleus	32.94	40.58
PGSC0003DMT400034878	Potato	nucleus	30.0	40.48
Solyc09g090130.2.1	Tomato	nucleus	31.47	39.93
Bra022831.1-P	Field mustard	nucleus	28.82	39.84
KRH32183	Soybean	nucleus	27.65	39.66
KRH22481	Soybean	nucleus	26.47	39.65
Solyc06g053610.2.1	Tomato	nucleus	30.88	39.62
PGSC0003DMT400044362	Potato	nucleus	31.18	39.55
Bra018267.1-P	Field mustard	nucleus	29.41	39.53
VIT_07s0005g03340.t01	Wine grape	nucleus	31.18	39.41
KRG92419	Soybean	nucleus	31.18	38.97
KRH25458	Soybean	nucleus	26.76	38.89
KRH56060	Soybean	nucleus	26.18	38.7
Solyc03g005570.2.1	Tomato	nucleus	28.53	38.65
KRH34387	Soybean	nucleus	31.18	38.55
PGSC0003DMT400042007	Potato	nucleus	30.29	38.43
Solyc07g054960.1.1	Tomato	nucleus	24.12	37.96
KRH56061	Soybean	nucleus	26.76	37.6
KRG95664	Soybean	nucleus	31.76	37.11
KRH67378	Soybean	nucleus	32.06	37.07
VIT_12s0134g00480.t01	Wine grape	nucleus	27.35	36.19
PGSC0003DMT400097096	Potato	nucleus	22.65	36.15
PGSC0003DMT400097604	Potato	nucleus	22.06	35.71
KRH56056	Soybean	nucleus	24.41	35.32
VIT_12s0134g00490.t01	Wine grape	nucleus	25.88	34.92
Solyc12g005640.1.1	Tomato	nucleus	23.82	34.76
PGSC0003DMT400035748	Potato	nucleus	23.53	34.63
KRH25468	Soybean	nucleus	23.82	34.62
PGSC0003DMT400067322	Potato	nucleus	24.71	34.29
PGSC0003DMT400067321	Potato	nucleus	24.71	34.29
Solyc06g033870.1.1	Tomato	nucleus	24.71	34.01
VIT_00s0203g00170.t01	Wine grape	nucleus	26.76	33.96
Solyc07g053230.2.1	Tomato	nucleus	25.0	33.86
PGSC0003DMT400067318	Potato	nucleus	24.12	33.74
Solyc07g053240.2.1	Tomato	nucleus	24.41	33.33
Solyc07g055000.1.1	Tomato	nucleus	23.53	33.06
KRH26874	Soybean	nucleus	24.12	32.67
Solyc03g093940.1.1	Tomato	nucleus	20.59	32.26
Solyc06g034000.1.1	Tomato	nucleus	22.35	32.2
PGSC0003DMT400093355	Potato	nucleus	22.65	31.95
PGSC0003DMT400070912	Potato	nucleus	23.82	31.15
KRH25461	Soybean	nucleus	27.94	31.15
PGSC0003DMT400051510	Potato	nucleus	22.06	30.86
KRH56059	Soybean	nucleus	29.41	30.86
PGSC0003DMT400051513	Potato	nucleus	22.35	30.77
PGSC0003DMT400039029	Potato	nucleus	21.76	30.45
KRH26875	Soybean	nucleus	27.65	30.03
Solyc03g093930.2.1	Tomato	nucleus	21.47	29.8
KRH56058	Soybean	nucleus	27.35	29.25
KRH25459	Soybean	nucleus	25.29	28.57
PGSC0003DMT400086165	Potato	nucleus	23.82	28.22
Solyc03g093890.2.1	Tomato	nucleus	20.59	27.67
PGSC0003DMT400021498	Potato	nucleus	19.12	27.08
PGSC0003DMT400021503	Potato	nucleus	13.24	23.44
PGSC0003DMT400021501	Potato	nucleus	13.53	23.35
Os04t0517100-01	Rice	nucleus	12.06	23.03
Solyc07g054980.1.1	Tomato	nucleus	27.06	19.66
CDX73801	Canola	nucleus	2.06	10.45

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	EntrezGene:4330397	ProteinID:BAD07916.1	ProteinID:BAD08151.1	ProteinID:BAF09723.1
ProteinID:BAS80409.1	ProteinID:EAZ24264.1	GO:GO:0000981	GO:GO:0001135	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006357	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0030154	GO:GO:0043565	GO:GO:0044212	InterPro:Homeobox-like_sf	InterPro:IPR017930
InterPro:Myb_dom	EnsemblPlantsGene:Os02g0695200	EnsemblPlants:Os02t0695200-01	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641
PANTHER:PTHR10641:SF596	UniProt:Q6YUQ6	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI000023683F
RefSeq:XP_015623616.1	SEG:seg	:	:	:	:

Description

OsMyb4-like proteinSimilar to P-type R2R3 Myb protein (Fragment). (Os02t0695200-01);Similar to P-type R2R3 Myb protein (Fragment). (Os02t0695200-02)

Coordinates

chr2:-:28558264..28560020

Molecular Weight (calculated)

36445.3 Da

IEP (calculated)

4.425

GRAVY (calculated)

-0.580

Length

340 amino acids

Sequence
(BLAST)

001: MGRGRAPCCA KVGLNRGSWT PQEDMRLIAY IQKHGHANWR ALPKQAGLLR CGKSCRLRWI NYLRPDLKRG NFTADEEDTI IKLHGLLGNK WSKIASCLPG
101: RTDNEIKNVW NTHLKKRVSQ REKPGDTKKK GKAADASDDA DAHSPSSSAS SSTTTAANNN NSGDTAGEQC GTSKEPENVD VSFFEQDIDI SDMLVDAPTE
201: APLVAAPMPP SPCSSSSLTT TTCVGAVSDE LLDLPEIDIE PDIWSIIDGY GGDEPGDGDA TVPCTASPGE EGAEWWVENL EKELGLWGPM DESLAHPDPP
301: GQVCYPGPLT ETEGDPVSTY FQSGPTASPL QEIASPAVLS

Best Arabidopsis Sequence Match ( AT1G16490.1 )
(BLAST)

001: MGKGRAPCCD KTKVKRGPWS HDEDLKLISF IHKNGHENWR SLPKQAGLLR CGKSCRLRWI NYLRPDVKRG NFSAEEEDTI IKLHQSFGNK WSKIASKLPG
101: RTDNEIKNVW HTHLKKRLSS ETNLNADEAG SKGSLNEEEN SQESSPNASM SFAGSNISSK DDDAQISQMF EHILTYSEFT GMLQEVDKPE LLEMPFDLDP
201: DIWSFIDGSD SFQQPENRAL QESEEDEVDK WFKHLESELG LEENDNQQQQ QQHKQGTEDE HSSSLLESYE LLIH

Arabidopsis Description

MYB58Transcription factor MYB58 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA47]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.