Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400021503 | Potato | nucleus | 89.85 | 92.19 |
| PGSC0003DMT400034263 | Potato | mitochondrion | 32.49 | 75.29 |
| Solyc03g093940.1.1 | Tomato | nucleus | 54.82 | 49.77 |
| PGSC0003DMT400021498 | Potato | nucleus | 38.58 | 31.67 |
| PGSC0003DMT400093355 | Potato | nucleus | 37.06 | 30.29 |
| PGSC0003DMT400051513 | Potato | nucleus | 36.04 | 28.74 |
| PGSC0003DMT400051510 | Potato | nucleus | 34.52 | 27.98 |
| PGSC0003DMT400070912 | Potato | nucleus | 35.53 | 26.92 |
| GSMUA_Achr4P18180_001 | Banana | nucleus | 19.8 | 26.71 |
| GSMUA_Achr5P14600_001 | Banana | nucleus | 26.4 | 22.71 |
| GSMUA_Achr4P21910_001 | Banana | nucleus | 24.37 | 21.92 |
| GSMUA_Achr1P09180_001 | Banana | nucleus | 24.37 | 20.87 |
| PGSC0003DMT400060168 | Potato | nucleus | 22.84 | 20.45 |
| GSMUA_Achr5P03920_001 | Banana | nucleus | 24.87 | 20.42 |
| PGSC0003DMT400067321 | Potato | nucleus | 25.38 | 20.41 |
| PGSC0003DMT400034878 | Potato | nucleus | 25.89 | 20.24 |
| PGSC0003DMT400039029 | Potato | nucleus | 24.87 | 20.16 |
| TraesCS6D01G210800.1 | Wheat | nucleus | 22.34 | 20.09 |
| Zm00001d017268_P001 | Maize | nucleus | 24.87 | 20.08 |
| TraesCS6D01G211400.1 | Wheat | nucleus | 25.89 | 20.08 |
| PGSC0003DMT400097604 | Potato | nucleus | 21.32 | 20.0 |
| GSMUA_Achr11P... | Banana | nucleus | 23.86 | 20.0 |
| TraesCS6D01G211100.1 | Wheat | nucleus | 25.38 | 19.92 |
| TraesCS6D01G210900.1 | Wheat | nucleus | 24.37 | 19.83 |
| PGSC0003DMT400042007 | Potato | nucleus | 26.9 | 19.78 |
| PGSC0003DMT400097096 | Potato | nucleus | 21.32 | 19.72 |
| TraesCS6B01G257200.1 | Wheat | nucleus | 25.38 | 19.68 |
| HORVU6Hr1G058640.1 | Barley | nucleus | 24.37 | 19.67 |
| TraesCS6D01G211200.1 | Wheat | nucleus | 24.37 | 19.67 |
| PGSC0003DMT400067322 | Potato | nucleus | 24.37 | 19.59 |
| TraesCS6A01G224400.1 | Wheat | nucleus | 23.86 | 19.5 |
| TraesCS6B01G257100.1 | Wheat | nucleus | 24.87 | 19.44 |
| TraesCS6A01G224200.1 | Wheat | nucleus | 24.87 | 19.37 |
| HORVU6Hr1G058580.1 | Barley | nucleus | 23.86 | 19.34 |
| TraesCS6B01G257000.1 | Wheat | nucleus | 23.86 | 19.34 |
| TraesCS6A01G224300.1 | Wheat | nucleus | 24.37 | 19.2 |
| TraesCS6A01G224100.1 | Wheat | nucleus | 24.87 | 19.07 |
| PGSC0003DMT400035748 | Potato | nucleus | 22.34 | 19.05 |
| PGSC0003DMT400044362 | Potato | nucleus | 25.89 | 19.03 |
| PGSC0003DMT400051682 | Potato | nucleus | 24.87 | 18.99 |
| EES07173 | Sorghum | nucleus | 24.87 | 18.99 |
| TraesCS6B01G257300.1 | Wheat | nucleus | 24.37 | 18.97 |
| PGSC0003DMT400067318 | Potato | nucleus | 23.35 | 18.93 |
| GSMUA_Achr6P31520_001 | Banana | nucleus | 23.35 | 18.85 |
| Zm00001d051149_P001 | Maize | nucleus | 24.87 | 18.85 |
| TraesCS6A01G224000.1 | Wheat | nucleus | 24.37 | 18.75 |
| TraesCS6D01G210500.1 | Wheat | nucleus | 22.84 | 18.75 |
| PGSC0003DMT400089342 | Potato | nucleus | 22.34 | 18.26 |
| TraesCS1A01G155300.1 | Wheat | nucleus | 24.37 | 18.25 |
| Os02t0624300-01 | Rice | nucleus | 23.86 | 18.22 |
| PGSC0003DMT400029235 | Potato | nucleus | 21.83 | 17.99 |
| Zm00001d032694_P001 | Maize | nucleus | 24.37 | 17.65 |
| Os04t0517100-01 | Rice | nucleus | 15.74 | 17.42 |
| TraesCS1B01G172500.1 | Wheat | nucleus | 22.84 | 17.31 |
| GSMUA_Achr4P28850_001 | Banana | nucleus | 23.86 | 17.28 |
| HORVU6Hr1G058630.3 | Barley | nucleus, plastid | 25.38 | 17.18 |
| TraesCS6A01G265300.1 | Wheat | nucleus | 22.84 | 17.18 |
| TraesCS1D01G154000.1 | Wheat | nucleus | 22.84 | 17.11 |
| PGSC0003DMT400086165 | Potato | nucleus | 24.87 | 17.07 |
| Zm00001d025864_P001 | Maize | nucleus | 23.86 | 16.97 |
| EES12516 | Sorghum | nucleus | 23.35 | 16.91 |
| Zm00001d014029_P001 | Maize | nucleus | 23.35 | 16.55 |
| GSMUA_Achr2P18090_001 | Banana | nucleus | 25.38 | 16.5 |
| Zm00001d003064_P001 | Maize | nucleus | 24.37 | 16.33 |
| Os10t0478300-01 | Rice | nucleus | 22.84 | 16.3 |
| HORVU6Hr1G058620.1 | Barley | nucleus | 23.86 | 16.21 |
| TraesCS2D01G378400.2 | Wheat | nucleus | 25.89 | 16.14 |
| TraesCS2B01G399200.1 | Wheat | nucleus | 25.89 | 16.14 |
| GSMUA_Achr5P03520_001 | Banana | nucleus | 24.37 | 15.84 |
| TraesCS2D01G444200.1 | Wheat | nucleus | 25.38 | 15.77 |
| GSMUA_Achr5P18600_001 | Banana | nucleus | 26.4 | 15.62 |
| TraesCS2A01G381900.2 | Wheat | nucleus | 25.89 | 15.6 |
| TraesCS6B01G292500.1 | Wheat | nucleus | 25.89 | 15.41 |
| EER91482 | Sorghum | nucleus | 22.84 | 15.2 |
| GSMUA_Achr11P... | Banana | nucleus | 21.83 | 14.98 |
| TraesCS6D01G249200.1 | Wheat | nucleus | 25.38 | 14.88 |
| GSMUA_Achr11P... | Banana | nucleus | 22.34 | 14.52 |
| TraesCS2B01G466400.1 | Wheat | nucleus | 25.89 | 14.37 |
| GSMUA_Achr4P27350_001 | Banana | nucleus | 21.83 | 14.33 |
| Zm00001d026204_P001 | Maize | nucleus | 23.86 | 14.29 |
| Zm00001d051520_P001 | Maize | nucleus | 23.86 | 13.82 |
| TraesCS2B01G466500.1 | Wheat | nucleus | 24.87 | 13.57 |
| Os02t0695200-01 | Rice | nucleus | 23.35 | 13.53 |
| TraesCS2D01G444300.1 | Wheat | nucleus | 24.87 | 13.5 |
| TraesCS2A01G445500.1 | Wheat | nucleus | 24.87 | 13.35 |
| Os04t0594100-01 | Rice | nucleus | 24.87 | 13.21 |
| EES05685 | Sorghum | nucleus | 25.38 | 12.89 |
| Zm00001d002476_P001 | Maize | nucleus | 26.4 | 12.84 |
| EES12768 | Sorghum | nucleus | 24.37 | 12.77 |
| Zm00001d026203_P001 | Maize | nucleus | 23.86 | 12.3 |
| HORVU6Hr1G067380.1 | Barley | nucleus | 24.87 | 11.11 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400021501 | EnsemblPlantsGene:PGSC0003DMG400008339 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF646 | PFAM:PF00249 | PFscan:PS51294 | PGSC:PGSC0003DMG400008339 | SEG:seg | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI0002955BD5 | UniProt:M1AF73 | MapMan:15.5.2.1 | : | : |
Description
GmMYB29B2 protein [Source:PGSC_GENE;Acc:PGSC0003DMG400008339]
Coordinates
chr3:+:36969798..36970493
Molecular Weight (calculated)
22609.8 Da
IEP (calculated)
9.847
GRAVY (calculated)
-0.766
Length
197 amino acids
Sequence
(BLAST)
(BLAST)
001: MNYLRPDVKR GPFTMEERET VIKMYQQLGN RWATIAGKLP GRTDNEVKNF FHTHLKKHLG QIKNNNNNNI DAPVKSRRAR KPKKKSSKAQ EKPQLFVDIS
101: ETWSNMNTTN LMISPMGGSS SLSSSSIITF DQNEKIDEPN PMIDMEKTVL ILESNPAATT THHHQSSSHS NIDYFDQFVD NTSFWLYLLN DANRIIL
101: ETWSNMNTTN LMISPMGGSS SLSSSSIITF DQNEKIDEPN PMIDMEKTVL ILESNPAATT THHHQSSSHS NIDYFDQFVD NTSFWLYLLN DANRIIL
001: MGRRPCCEKI GLKKGPWSAE EDRILINYIS LHGHPNWRAL PKLAGLLRCG KSCRLRWINY LRPDIKRGNF TPHEEDTIIS LHQLLGNRWS AIAAKLPGRT
101: DNEIKNVWHT HLKKRLHHSQ DQNNKEDFVS TTAAEMPTSP QQQSSSSADI SAITTLGNNN DISNSNKDSA TSSEDVLAII DESFWSEVVL MDCDISGNEK
201: NEKKIENWEG SLDRNDKGYN HDMEFWFDHL TSSSCIIGEM SDISEF
101: DNEIKNVWHT HLKKRLHHSQ DQNNKEDFVS TTAAEMPTSP QQQSSSSADI SAITTLGNNN DISNSNKDSA TSSEDVLAII DESFWSEVVL MDCDISGNEK
201: NEKKIENWEG SLDRNDKGYN HDMEFWFDHL TSSSCIIGEM SDISEF
Arabidopsis Description
ATMYB13Transcription factor MYB13 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNC9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.