Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g034000.1.1 | Tomato | nucleus | 87.24 | 89.83 |
| PGSC0003DMT400051513 | Potato | nucleus | 88.48 | 87.04 |
| PGSC0003DMT400070912 | Potato | nucleus | 83.54 | 78.08 |
| PGSC0003DMT400034263 | Potato | mitochondrion | 22.63 | 64.71 |
| PGSC0003DMT400093355 | Potato | nucleus | 45.27 | 45.64 |
| PGSC0003DMT400021498 | Potato | nucleus | 44.03 | 44.58 |
| GSMUA_Achr4P18180_001 | Banana | nucleus | 25.93 | 43.15 |
| PGSC0003DMT400060168 | Potato | nucleus | 32.51 | 35.91 |
| PGSC0003DMT400021501 | Potato | nucleus | 27.98 | 34.52 |
| PGSC0003DMT400021503 | Potato | nucleus | 26.75 | 33.85 |
| GSMUA_Achr5P03920_001 | Banana | nucleus | 32.92 | 33.33 |
| GSMUA_Achr4P21910_001 | Banana | nucleus | 30.04 | 33.33 |
| PGSC0003DMT400097604 | Potato | nucleus | 28.4 | 32.86 |
| GSMUA_Achr11P... | Banana | nucleus | 31.69 | 32.77 |
| PGSC0003DMT400089342 | Potato | nucleus | 32.1 | 32.37 |
| GSMUA_Achr5P14600_001 | Banana | nucleus | 30.45 | 32.31 |
| PGSC0003DMT400035748 | Potato | nucleus | 30.45 | 32.03 |
| EES07173 | Sorghum | nucleus | 33.74 | 31.78 |
| TraesCS6D01G210800.1 | Wheat | nucleus | 28.4 | 31.51 |
| TraesCS6D01G211100.1 | Wheat | nucleus | 32.51 | 31.47 |
| TraesCS6D01G210900.1 | Wheat | nucleus | 31.28 | 31.41 |
| GSMUA_Achr1P09180_001 | Banana | nucleus | 29.63 | 31.3 |
| HORVU6Hr1G058640.1 | Barley | nucleus | 31.28 | 31.15 |
| TraesCS6D01G211200.1 | Wheat | nucleus | 31.28 | 31.15 |
| Zm00001d017268_P001 | Maize | nucleus | 31.28 | 31.15 |
| PGSC0003DMT400067321 | Potato | nucleus | 31.28 | 31.02 |
| PGSC0003DMT400097096 | Potato | nucleus | 27.16 | 30.99 |
| PGSC0003DMT400034878 | Potato | nucleus | 32.1 | 30.95 |
| TraesCS6A01G224200.1 | Wheat | nucleus | 32.1 | 30.83 |
| TraesCS6B01G257300.1 | Wheat | nucleus | 31.69 | 30.43 |
| TraesCS6A01G224300.1 | Wheat | nucleus | 31.28 | 30.4 |
| TraesCS6A01G224100.1 | Wheat | nucleus | 32.1 | 30.35 |
| TraesCS6B01G257200.1 | Wheat | nucleus | 31.69 | 30.32 |
| TraesCS6B01G257100.1 | Wheat | nucleus | 31.28 | 30.16 |
| TraesCS6A01G224000.1 | Wheat | nucleus | 31.69 | 30.08 |
| PGSC0003DMT400051682 | Potato | nucleus | 31.69 | 29.84 |
| TraesCS1A01G155300.1 | Wheat | nucleus | 32.1 | 29.66 |
| HORVU6Hr1G058580.1 | Barley | nucleus | 29.63 | 29.63 |
| TraesCS6D01G210500.1 | Wheat | nucleus | 29.22 | 29.58 |
| TraesCS6D01G211400.1 | Wheat | nucleus | 30.86 | 29.53 |
| PGSC0003DMT400044362 | Potato | nucleus | 32.51 | 29.48 |
| TraesCS6A01G224400.1 | Wheat | nucleus | 29.22 | 29.46 |
| PGSC0003DMT400067322 | Potato | nucleus | 29.63 | 29.39 |
| Zm00001d051149_P001 | Maize | nucleus | 31.28 | 29.23 |
| TraesCS6B01G257000.1 | Wheat | nucleus | 29.22 | 29.22 |
| PGSC0003DMT400042007 | Potato | nucleus | 32.1 | 29.1 |
| GSMUA_Achr6P31520_001 | Banana | nucleus | 29.22 | 29.1 |
| PGSC0003DMT400067318 | Potato | nucleus | 28.81 | 28.81 |
| Os02t0624300-01 | Rice | nucleus | 30.45 | 28.68 |
| TraesCS1D01G154000.1 | Wheat | nucleus | 30.86 | 28.52 |
| TraesCS1B01G172500.1 | Wheat | nucleus | 30.45 | 28.46 |
| EES12516 | Sorghum | nucleus | 31.69 | 28.31 |
| Zm00001d025864_P001 | Maize | nucleus | 31.69 | 27.8 |
| PGSC0003DMT400029235 | Potato | nucleus | 27.16 | 27.62 |
| Zm00001d032694_P001 | Maize | nucleus | 30.86 | 27.57 |
| Os10t0478300-01 | Rice | nucleus | 31.28 | 27.54 |
| PGSC0003DMT400039029 | Potato | nucleus | 27.16 | 27.16 |
| GSMUA_Achr4P28850_001 | Banana | nucleus | 30.04 | 26.84 |
| EER91482 | Sorghum | nucleus | 32.51 | 26.69 |
| Zm00001d014029_P001 | Maize | nucleus | 30.45 | 26.62 |
| TraesCS6A01G265300.1 | Wheat | nucleus | 28.4 | 26.34 |
| Zm00001d003064_P001 | Maize | nucleus | 31.69 | 26.19 |
| HORVU6Hr1G058630.3 | Barley | nucleus, plastid | 30.86 | 25.77 |
| HORVU6Hr1G058620.1 | Barley | nucleus | 30.45 | 25.52 |
| TraesCS2D01G444200.1 | Wheat | nucleus | 32.92 | 25.24 |
| GSMUA_Achr5P03520_001 | Banana | nucleus | 31.28 | 25.08 |
| GSMUA_Achr2P18090_001 | Banana | nucleus | 31.28 | 25.08 |
| Zm00001d026204_P001 | Maize | nucleus | 33.33 | 24.62 |
| GSMUA_Achr11P... | Banana | nucleus | 28.81 | 24.39 |
| GSMUA_Achr11P... | Banana | nucleus | 30.04 | 24.09 |
| TraesCS2D01G378400.2 | Wheat | nucleus | 30.86 | 23.73 |
| TraesCS2B01G399200.1 | Wheat | nucleus | 30.86 | 23.73 |
| PGSC0003DMT400086165 | Potato | nucleus | 27.57 | 23.34 |
| GSMUA_Achr4P27350_001 | Banana | nucleus | 28.81 | 23.33 |
| Zm00001d051520_P001 | Maize | nucleus | 32.51 | 23.24 |
| GSMUA_Achr5P18600_001 | Banana | nucleus | 31.69 | 23.12 |
| TraesCS2B01G466400.1 | Wheat | nucleus | 33.74 | 23.1 |
| TraesCS2A01G381900.2 | Wheat | nucleus | 30.86 | 22.94 |
| TraesCS6B01G292500.1 | Wheat | nucleus | 30.86 | 22.66 |
| TraesCS6D01G249200.1 | Wheat | nucleus | 31.28 | 22.62 |
| Os02t0695200-01 | Rice | nucleus | 30.86 | 22.06 |
| TraesCS2D01G444300.1 | Wheat | nucleus | 32.92 | 22.04 |
| TraesCS2B01G466500.1 | Wheat | nucleus | 32.51 | 21.88 |
| Os04t0594100-01 | Rice | nucleus | 32.92 | 21.56 |
| TraesCS2A01G445500.1 | Wheat | nucleus | 32.51 | 21.53 |
| Os04t0517100-01 | Rice | nucleus | 15.64 | 21.35 |
| Zm00001d026203_P001 | Maize | nucleus | 33.33 | 21.2 |
| EES12768 | Sorghum | nucleus | 32.51 | 21.01 |
| Zm00001d002476_P001 | Maize | nucleus | 34.57 | 20.74 |
| EES05685 | Sorghum | nucleus | 32.51 | 20.36 |
| HORVU6Hr1G067380.1 | Barley | nucleus | 30.86 | 17.01 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:107062569 | MapMan:15.5.2.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:M1BRU6 | InterPro:Myb_dom | PFAM:PF00249 |
| EnsemblPlantsGene:PGSC0003DMG400020012 | PGSC:PGSC0003DMG400020012 | EnsemblPlants:PGSC0003DMT400051510 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF646 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI000295570F | RefSeq:XP_015168843.1 | SEG:seg |
Description
MYB transcription factor MYB117 [Source:PGSC_GENE;Acc:PGSC0003DMG400020012]
Coordinates
chr6:-:35534084..35535099
Molecular Weight (calculated)
28108.0 Da
IEP (calculated)
6.313
GRAVY (calculated)
-0.748
Length
243 amino acids
Sequence
(BLAST)
(BLAST)
001: MDYVKKGAWS PEEDQKMIDY IMQYRIWNWS HMPKFAGLSR TGKSCRLRWI NYLKPDLKKG PFSMEEVEIV FRMYQSLGNK WSAIAKELPG RTDNEIKNFY
101: HTHLKKHHGR KDEVKPKSRK KAKQLEMSNQ KKPLITTCPN IEGPNDQSLD FTNSSSSSSY ITFDENYEIL ETSNQDNDVT SIVNQVHDDD NIVILESNPE
201: SSTSSSSSSV DLHINDFMDV SVHSSNVVDF WLELYLAADN LKI
101: HTHLKKHHGR KDEVKPKSRK KAKQLEMSNQ KKPLITTCPN IEGPNDQSLD FTNSSSSSSY ITFDENYEIL ETSNQDNDVT SIVNQVHDDD NIVILESNPE
201: SSTSSSSSSV DLHINDFMDV SVHSSNVVDF WLELYLAADN LKI
001: MGRAPCCEKM GLKRGPWTPE EDQILVSFIL NHGHSNWRAL PKQAGLLRCG KSCRLRWMNY LKPDIKRGNF TKEEEDAIIS LHQILGNRWS AIAAKLPGRT
101: DNEIKNVWHT HLKKRLEDYQ PAKPKTSNKK KGTKPKSESV ITSSNSTRSE SELADSSNPS GESLFSTSPS TSEVSSMTLI SHDGYSNEIN MDNKPGDIST
201: IDQECVSFET FGADIDESFW KETLYSQDEH NYVSNDLEVA GLVEIQQEFQ NLGSANNEMI FDSEMDFWFD VLARTGGEQD LLAGL
101: DNEIKNVWHT HLKKRLEDYQ PAKPKTSNKK KGTKPKSESV ITSSNSTRSE SELADSSNPS GESLFSTSPS TSEVSSMTLI SHDGYSNEIN MDNKPGDIST
201: IDQECVSFET FGADIDESFW KETLYSQDEH NYVSNDLEVA GLVEIQQEFQ NLGSANNEMI FDSEMDFWFD VLARTGGEQD LLAGL
Arabidopsis Description
MYB15Transcription factor MYB15 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTC4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.