Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G466500.1 | Wheat | nucleus | 91.28 | 92.8 |
| TraesCS2D01G444200.1 | Wheat | nucleus | 80.11 | 92.74 |
| TraesCS2D01G444300.1 | Wheat | nucleus | 91.28 | 92.29 |
| Os04t0594100-01 | Rice | nucleus | 71.93 | 71.16 |
| EES12768 | Sorghum | nucleus | 64.03 | 62.5 |
| VIT_05s0049g01010.t01 | Wine grape | nucleus | 24.25 | 61.81 |
| Zm00001d026204_P001 | Maize | nucleus | 54.22 | 60.49 |
| TraesCS6A01G265300.1 | Wheat | nucleus | 41.96 | 58.78 |
| Zm00001d002476_P001 | Maize | nucleus | 64.31 | 58.27 |
| Zm00001d026203_P001 | Maize | nucleus | 60.49 | 58.12 |
| PGSC0003DMT400034263 | Potato | mitochondrion | 12.81 | 55.29 |
| GSMUA_Achr2P18090_001 | Banana | nucleus | 43.05 | 52.15 |
| GSMUA_Achr11P... | Banana | nucleus | 38.96 | 49.83 |
| GSMUA_Achr5P03520_001 | Banana | nucleus | 40.6 | 49.17 |
| GSMUA_Achr4P28850_001 | Banana | nucleus | 35.97 | 48.53 |
| KRH56057 | Soybean | nucleus | 20.71 | 47.5 |
| GSMUA_Achr4P27350_001 | Banana | nucleus | 37.33 | 45.67 |
| GSMUA_Achr6P31520_001 | Banana | nucleus | 29.97 | 45.08 |
| TraesCS6A01G224400.1 | Wheat | nucleus | 29.43 | 44.81 |
| Solyc05g055030.1.1 | Tomato | nucleus | 26.43 | 44.5 |
| AT1G06180.1 | Thale cress | nucleus | 29.7 | 44.31 |
| TraesCS6A01G224200.1 | Wheat | nucleus | 30.52 | 44.27 |
| TraesCS6A01G224100.1 | Wheat | nucleus | 30.79 | 43.97 |
| VIT_05s0049g01020.t01 | Wine grape | nucleus | 30.25 | 43.87 |
| KRH34142 | Soybean | nucleus | 25.07 | 43.81 |
| PGSC0003DMT400060168 | Potato | nucleus | 26.16 | 43.64 |
| Bra021708.1-P | Field mustard | nucleus | 29.7 | 43.6 |
| TraesCS6A01G224000.1 | Wheat | nucleus | 30.25 | 43.36 |
| Bra015481.1-P | Field mustard | nucleus | 29.7 | 43.25 |
| TraesCS6A01G224300.1 | Wheat | nucleus | 29.43 | 43.2 |
| KRH31704 | Soybean | nucleus | 31.06 | 43.18 |
| KRH69121 | Soybean | nucleus | 31.06 | 43.18 |
| KRH68789 | Soybean | nucleus | 24.52 | 43.06 |
| KRG92419 | Soybean | nucleus | 31.88 | 43.01 |
| AT2G31180.1 | Thale cress | nucleus | 29.16 | 42.97 |
| KRG97042 | Soybean | nucleus | 24.8 | 42.92 |
| Solyc06g083900.2.1 | Tomato | nucleus | 29.7 | 42.75 |
| KRH34387 | Soybean | nucleus | 31.88 | 42.55 |
| PGSC0003DMT400044362 | Potato | nucleus | 30.79 | 42.16 |
| Bra018267.1-P | Field mustard | nucleus | 28.88 | 41.9 |
| Bra022831.1-P | Field mustard | nucleus | 28.07 | 41.87 |
| Solyc09g090130.2.1 | Tomato | nucleus | 30.52 | 41.79 |
| Solyc06g053610.2.1 | Tomato | nucleus | 29.7 | 41.13 |
| KRH22481 | Soybean | nucleus | 25.34 | 40.97 |
| VIT_07s0005g03340.t01 | Wine grape | nucleus | 29.97 | 40.89 |
| PGSC0003DMT400034878 | Potato | nucleus | 28.07 | 40.87 |
| PGSC0003DMT400051682 | Potato | nucleus | 28.61 | 40.7 |
| TraesCS1A01G155300.1 | Wheat | nucleus | 28.88 | 40.3 |
| PGSC0003DMT400042007 | Potato | nucleus | 29.43 | 40.3 |
| Solyc03g005570.2.1 | Tomato | nucleus | 27.25 | 39.84 |
| KRH32183 | Soybean | nucleus | 25.61 | 39.66 |
| KRG95664 | Soybean | nucleus | 31.06 | 39.18 |
| KRH56060 | Soybean | nucleus | 24.52 | 39.13 |
| Solyc07g054960.1.1 | Tomato | nucleus | 22.89 | 38.89 |
| KRH56061 | Soybean | nucleus | 25.61 | 38.84 |
| KRH67378 | Soybean | nucleus | 31.06 | 38.78 |
| KRH25458 | Soybean | nucleus | 24.52 | 38.46 |
| VIT_12s0134g00480.t01 | Wine grape | nucleus | 26.16 | 37.35 |
| PGSC0003DMT400097604 | Potato | nucleus | 21.25 | 37.14 |
| PGSC0003DMT400097096 | Potato | nucleus | 21.53 | 37.09 |
| PGSC0003DMT400067318 | Potato | nucleus | 23.98 | 36.21 |
| KRH56056 | Soybean | nucleus | 23.16 | 36.17 |
| Solyc12g005640.1.1 | Tomato | nucleus | 22.89 | 36.05 |
| PGSC0003DMT400035748 | Potato | nucleus | 22.62 | 35.93 |
| TraesCS2A01G381900.2 | Wheat | nucleus | 31.88 | 35.78 |
| PGSC0003DMT400067321 | Potato | nucleus | 23.71 | 35.51 |
| KRH25468 | Soybean | nucleus | 22.62 | 35.47 |
| KRH26874 | Soybean | nucleus | 23.71 | 34.66 |
| Solyc07g053230.2.1 | Tomato | nucleus | 23.71 | 34.66 |
| Solyc07g053240.2.1 | Tomato | nucleus | 23.43 | 34.54 |
| VIT_12s0134g00490.t01 | Wine grape | nucleus | 23.71 | 34.52 |
| Solyc07g055000.1.1 | Tomato | nucleus | 22.62 | 34.3 |
| PGSC0003DMT400067322 | Potato | nucleus | 22.89 | 34.29 |
| PGSC0003DMT400093355 | Potato | nucleus | 22.07 | 33.61 |
| Solyc06g033870.1.1 | Tomato | nucleus | 22.62 | 33.6 |
| VIT_00s0203g00170.t01 | Wine grape | nucleus | 24.52 | 33.58 |
| Solyc06g034000.1.1 | Tomato | nucleus | 21.53 | 33.47 |
| Solyc03g093940.1.1 | Tomato | nucleus | 19.62 | 33.18 |
| KRH26875 | Soybean | nucleus | 27.79 | 32.59 |
| PGSC0003DMT400051510 | Potato | nucleus | 21.53 | 32.51 |
| PGSC0003DMT400051513 | Potato | nucleus | 21.8 | 32.39 |
| PGSC0003DMT400070912 | Potato | nucleus | 22.62 | 31.92 |
| Solyc03g093930.2.1 | Tomato | nucleus | 21.25 | 31.84 |
| PGSC0003DMT400039029 | Potato | nucleus | 20.98 | 31.69 |
| KRH25461 | Soybean | nucleus | 25.89 | 31.15 |
| Solyc03g093890.2.1 | Tomato | nucleus | 20.71 | 30.04 |
| KRH56059 | Soybean | nucleus | 26.43 | 29.94 |
| KRH56058 | Soybean | nucleus | 25.89 | 29.87 |
| KRH25459 | Soybean | nucleus | 23.98 | 29.24 |
| PGSC0003DMT400021498 | Potato | nucleus | 19.07 | 29.17 |
| PGSC0003DMT400086165 | Potato | nucleus | 22.62 | 28.92 |
| PGSC0003DMT400021503 | Potato | nucleus | 13.08 | 25.0 |
| PGSC0003DMT400021501 | Potato | nucleus | 13.35 | 24.87 |
| Solyc07g054980.1.1 | Tomato | nucleus | 25.89 | 20.3 |
| CDX73801 | Canola | nucleus | 1.63 | 8.96 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G445500.1 | EnsemblPlantsGene:TraesCS2A01G445500 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF596 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 |
| TIGR:cd00167 | MapMan:15.5.2.1 | : | : | : | : |
Description
No Description!
Coordinates
chr2A:+:695150181..695151471
Molecular Weight (calculated)
39336.1 Da
IEP (calculated)
4.584
GRAVY (calculated)
-0.467
Length
367 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKGRAPCCA KVGLNRGSWT PEEDMRLIAY IQKFGHANWR ALPKQAGLLR CGKSCRLRWI NYLRPDLKRG NFTVEEEETL IKLHNMLGNK WSKIAACLPG
101: RTDNEIKNVW NTHLKKRVAA SAGEQKKGGA KGKKKTTCAD VPAPSPSPSS STTTTTTTTT NCSSGESGEQ SNTSKELELE LELEKIEIPM LDLGFDLDML
201: LDTVTNTHCP AISSAPTSRC SSASPTCVVD DGALLDLPEI DIVPELWSIM DGEGGAGACA ETAQVPWSNA APCDGKGPEA SAATADDEDG KEWWLEDLEK
301: ELGLWGPIDD YQYQQPDPQG LSGRADPLSA SVDDPVSSYF QAGPASATST IHGPEASAVL TDIPMGL
101: RTDNEIKNVW NTHLKKRVAA SAGEQKKGGA KGKKKTTCAD VPAPSPSPSS STTTTTTTTT NCSSGESGEQ SNTSKELELE LELEKIEIPM LDLGFDLDML
201: LDTVTNTHCP AISSAPTSRC SSASPTCVVD DGALLDLPEI DIVPELWSIM DGEGGAGACA ETAQVPWSNA APCDGKGPEA SAATADDEDG KEWWLEDLEK
301: ELGLWGPIDD YQYQQPDPQG LSGRADPLSA SVDDPVSSYF QAGPASATST IHGPEASAVL TDIPMGL
001: MGKGRAPCCD KTKVKRGPWS PEEDIKLISF IQKFGHENWR SLPKQSGLLR CGKSCRLRWI NYLRPDLKRG NFTSEEEETI IKLHHNYGNK WSKIASQLPG
101: RTDNEIKNVW HTHLKKRLAQ SSGTADEPAS PCSSDSVSRG KDDKSSHVED SLNRETNHRN ELSTSMSSGG SNQQDDPKID ELRFEYIEEA YSEFNDIIIQ
201: EVDKPDLLEI PFDSDPDIWS FLDTSNSFQQ STANENSSGS RATTEEESDE DEVKKWFKHL ESELGLEEDD NQQQYKEEES SSSSLLKNYE LMIH
101: RTDNEIKNVW HTHLKKRLAQ SSGTADEPAS PCSSDSVSRG KDDKSSHVED SLNRETNHRN ELSTSMSSGG SNQQDDPKID ELRFEYIEEA YSEFNDIIIQ
201: EVDKPDLLEI PFDSDPDIWS FLDTSNSFQQ STANENSSGS RATTEEESDE DEVKKWFKHL ESELGLEEDD NQQQYKEEES SSSSLLKNYE LMIH
Arabidopsis Description
ATMYB63myb domain protein 63 [Source:TAIR;Acc:AT1G79180]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.