Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d032694_P001 | Maize | nucleus | 76.26 | 77.94 |
| EER91482 | Sorghum | nucleus | 79.86 | 75.0 |
| Os10t0478300-01 | Rice | nucleus | 61.51 | 61.96 |
| VIT_05s0049g01010.t01 | Wine grape | nucleus | 32.01 | 61.81 |
| TraesCS1D01G154000.1 | Wheat | nucleus | 53.24 | 56.27 |
| TraesCS1B01G172500.1 | Wheat | nucleus | 52.52 | 56.15 |
| TraesCS1A01G155300.1 | Wheat | nucleus | 52.88 | 55.89 |
| PGSC0003DMT400034263 | Potato | mitochondrion | 16.55 | 54.12 |
| Zm00001d017268_P001 | Maize | nucleus | 43.53 | 49.59 |
| AT1G06180.1 | Thale cress | nucleus | 41.73 | 47.15 |
| VIT_05s0049g01020.t01 | Wine grape | nucleus | 42.45 | 46.64 |
| Zm00001d051149_P001 | Maize | nucleus | 43.53 | 46.54 |
| AT2G31180.1 | Thale cress | nucleus | 41.01 | 45.78 |
| KRH34142 | Soybean | nucleus | 34.17 | 45.24 |
| Bra021708.1-P | Field mustard | nucleus | 40.65 | 45.2 |
| KRH56057 | Soybean | nucleus | 25.9 | 45.0 |
| KRG97042 | Soybean | nucleus | 34.17 | 44.81 |
| KRH68789 | Soybean | nucleus | 33.45 | 44.5 |
| Bra022831.1-P | Field mustard | nucleus | 39.21 | 44.31 |
| Bra015481.1-P | Field mustard | nucleus | 39.93 | 44.05 |
| PGSC0003DMT400034878 | Potato | nucleus | 39.93 | 44.05 |
| KRH31704 | Soybean | nucleus | 41.73 | 43.94 |
| KRH69121 | Soybean | nucleus | 41.73 | 43.94 |
| KRG92419 | Soybean | nucleus | 42.81 | 43.75 |
| Solyc05g055030.1.1 | Tomato | nucleus | 34.17 | 43.58 |
| VIT_07s0005g03340.t01 | Wine grape | nucleus | 42.09 | 43.49 |
| Bra018267.1-P | Field mustard | nucleus | 39.57 | 43.48 |
| Solyc03g005570.2.1 | Tomato | nucleus | 39.21 | 43.43 |
| PGSC0003DMT400042007 | Potato | nucleus | 41.37 | 42.91 |
| Solyc06g083900.2.1 | Tomato | nucleus | 39.21 | 42.75 |
| PGSC0003DMT400060168 | Potato | nucleus | 33.81 | 42.73 |
| Solyc06g053610.2.1 | Tomato | nucleus | 40.65 | 42.64 |
| KRH34387 | Soybean | nucleus | 42.09 | 42.55 |
| Zm00001d025864_P001 | Maize | nucleus | 42.09 | 42.24 |
| PGSC0003DMT400051682 | Potato | nucleus | 38.49 | 41.47 |
| Solyc09g090130.2.1 | Tomato | nucleus | 39.93 | 41.42 |
| PGSC0003DMT400044362 | Potato | nucleus | 39.93 | 41.42 |
| KRG95664 | Soybean | nucleus | 42.81 | 40.89 |
| Zm00001d003064_P001 | Maize | nucleus | 42.81 | 40.48 |
| KRH67378 | Soybean | nucleus | 42.81 | 40.48 |
| KRH32183 | Soybean | nucleus | 34.17 | 40.08 |
| KRH22481 | Soybean | nucleus | 31.3 | 38.33 |
| PGSC0003DMT400097096 | Potato | nucleus | 29.14 | 38.03 |
| KRH56061 | Soybean | nucleus | 32.37 | 37.19 |
| KRH56060 | Soybean | nucleus | 30.58 | 36.96 |
| KRH25458 | Soybean | nucleus | 30.94 | 36.75 |
| Solyc07g054960.1.1 | Tomato | nucleus | 28.06 | 36.11 |
| VIT_12s0134g00480.t01 | Wine grape | nucleus | 33.09 | 35.8 |
| VIT_12s0134g00490.t01 | Wine grape | nucleus | 32.37 | 35.71 |
| PGSC0003DMT400067321 | Potato | nucleus | 30.94 | 35.1 |
| KRH25468 | Soybean | nucleus | 29.5 | 35.04 |
| KRH56056 | Soybean | nucleus | 29.5 | 34.89 |
| Solyc12g005640.1.1 | Tomato | nucleus | 29.14 | 34.76 |
| PGSC0003DMT400097604 | Potato | nucleus | 26.26 | 34.76 |
| PGSC0003DMT400035748 | Potato | nucleus | 28.78 | 34.63 |
| PGSC0003DMT400067322 | Potato | nucleus | 30.22 | 34.29 |
| Solyc07g053230.2.1 | Tomato | nucleus | 30.94 | 34.26 |
| Solyc03g093940.1.1 | Tomato | nucleus | 26.62 | 34.1 |
| Zm00001d026204_P001 | Maize | nucleus | 39.57 | 33.43 |
| PGSC0003DMT400039029 | Potato | nucleus | 29.14 | 33.33 |
| PGSC0003DMT400067318 | Potato | nucleus | 29.14 | 33.33 |
| PGSC0003DMT400093355 | Potato | nucleus | 28.78 | 33.2 |
| Solyc07g053240.2.1 | Tomato | nucleus | 29.5 | 32.93 |
| VIT_00s0203g00170.t01 | Wine grape | nucleus | 31.3 | 32.46 |
| KRH26874 | Soybean | nucleus | 29.14 | 32.27 |
| Solyc07g055000.1.1 | Tomato | nucleus | 28.06 | 32.23 |
| Solyc06g034000.1.1 | Tomato | nucleus | 27.34 | 32.2 |
| Solyc03g093930.2.1 | Tomato | nucleus | 27.7 | 31.43 |
| Solyc03g093890.2.1 | Tomato | nucleus | 28.42 | 31.23 |
| PGSC0003DMT400051513 | Potato | nucleus | 27.34 | 30.77 |
| PGSC0003DMT400051510 | Potato | nucleus | 26.62 | 30.45 |
| PGSC0003DMT400021498 | Potato | nucleus | 26.26 | 30.42 |
| Zm00001d051520_P001 | Maize | nucleus | 37.05 | 30.29 |
| Solyc06g033870.1.1 | Tomato | nucleus | 26.62 | 29.96 |
| PGSC0003DMT400070912 | Potato | nucleus | 27.34 | 29.23 |
| KRH25461 | Soybean | nucleus | 32.01 | 29.18 |
| Zm00001d026203_P001 | Maize | nucleus | 39.57 | 28.8 |
| KRH56058 | Soybean | nucleus | 32.73 | 28.62 |
| KRH56059 | Soybean | nucleus | 33.09 | 28.4 |
| KRH26875 | Soybean | nucleus | 31.65 | 28.11 |
| Zm00001d002476_P001 | Maize | nucleus | 39.57 | 27.16 |
| KRH25459 | Soybean | nucleus | 28.78 | 26.58 |
| PGSC0003DMT400086165 | Potato | nucleus | 27.34 | 26.48 |
| PGSC0003DMT400021503 | Potato | nucleus | 16.19 | 23.44 |
| PGSC0003DMT400021501 | Potato | nucleus | 16.55 | 23.35 |
| Solyc07g054980.1.1 | Tomato | nucleus | 31.3 | 18.59 |
| CDX73801 | Canola | nucleus | 1.44 | 5.97 |
Protein Annotations
| EnsemblPlants:Zm00001d014029_P001 | EnsemblPlants:Zm00001d014029_T001 | EnsemblPlantsGene:Zm00001d014029 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF533 | PFAM:PF00249 | PFscan:PS51294 | ProteinID:AQK65068.1 | SEG:seg |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0001E24AF4 | UniProt:A0A1D6GPG9 | MapMan:15.5.2.1 | : |
Description
myb domain protein 15
Coordinates
chr5:+:29347456..29349180
Molecular Weight (calculated)
30333.5 Da
IEP (calculated)
7.023
GRAVY (calculated)
-0.683
Length
278 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRAPCCEKK GLRRGAWSPE EDQRLVAYVR QNGHPNWRAL PRQAGLLRCG KSCRLRWINY LHPDIKRGNF TADEEALVVR LHRELGNRWS AIAAQLPGRT
101: DNEIKNVWHT HIKKRLGGDD GGGTGGRQEK KARKSRTRTA GATKRPAADV DSSERQPASP GQSSSVSSGV TFSAAAVSSS PDNAAATSRQ EEQLQVGGAG
201: KAEMEMEMEM ESFSSAEFPA IDDSFWSSAD VTDLGLCAMD GDELGIAGPP SSSTRDQDME FWLKMLLEAG DMRDLSVL
101: DNEIKNVWHT HIKKRLGGDD GGGTGGRQEK KARKSRTRTA GATKRPAADV DSSERQPASP GQSSSVSSGV TFSAAAVSSS PDNAAATSRQ EEQLQVGGAG
201: KAEMEMEMEM ESFSSAEFPA IDDSFWSSAD VTDLGLCAMD GDELGIAGPP SSSTRDQDME FWLKMLLEAG DMRDLSVL
001: MGRAPCCEKM GLKRGPWTPE EDQILVSFIL NHGHSNWRAL PKQAGLLRCG KSCRLRWMNY LKPDIKRGNF TKEEEDAIIS LHQILGNRWS AIAAKLPGRT
101: DNEIKNVWHT HLKKRLEDYQ PAKPKTSNKK KGTKPKSESV ITSSNSTRSE SELADSSNPS GESLFSTSPS TSEVSSMTLI SHDGYSNEIN MDNKPGDIST
201: IDQECVSFET FGADIDESFW KETLYSQDEH NYVSNDLEVA GLVEIQQEFQ NLGSANNEMI FDSEMDFWFD VLARTGGEQD LLAGL
101: DNEIKNVWHT HLKKRLEDYQ PAKPKTSNKK KGTKPKSESV ITSSNSTRSE SELADSSNPS GESLFSTSPS TSEVSSMTLI SHDGYSNEIN MDNKPGDIST
201: IDQECVSFET FGADIDESFW KETLYSQDEH NYVSNDLEVA GLVEIQQEFQ NLGSANNEMI FDSEMDFWFD VLARTGGEQD LLAGL
Arabidopsis Description
MYB15Transcription factor MYB15 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTC4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.