Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P18180_001 | Banana | nucleus | 31.23 | 71.23 |
| VIT_05s0049g01010.t01 | Wine grape | nucleus | 28.23 | 65.28 |
| PGSC0003DMT400034263 | Potato | mitochondrion | 14.41 | 56.47 |
| GSMUA_Achr11P... | Banana | nucleus | 38.14 | 54.04 |
| GSMUA_Achr5P14600_001 | Banana | nucleus | 35.74 | 51.97 |
| GSMUA_Achr1P09180_001 | Banana | nucleus | 35.44 | 51.3 |
| GSMUA_Achr4P21910_001 | Banana | nucleus | 33.33 | 50.68 |
| KRH56057 | Soybean | nucleus | 24.32 | 50.62 |
| GSMUA_Achr11P... | Banana | nucleus | 45.95 | 50.49 |
| VIT_05s0049g01020.t01 | Wine grape | nucleus | 38.14 | 50.2 |
| GSMUA_Achr5P03920_001 | Banana | nucleus | 35.44 | 49.17 |
| KRH68789 | Soybean | nucleus | 30.03 | 47.85 |
| KRG97042 | Soybean | nucleus | 30.33 | 47.64 |
| KRH34142 | Soybean | nucleus | 30.03 | 47.62 |
| AT1G06180.1 | Thale cress | nucleus | 35.14 | 47.56 |
| Solyc05g055030.1.1 | Tomato | nucleus | 30.63 | 46.79 |
| PGSC0003DMT400060168 | Potato | nucleus | 30.63 | 46.36 |
| Solyc09g090130.2.1 | Tomato | nucleus | 36.64 | 45.52 |
| PGSC0003DMT400044362 | Potato | nucleus | 36.34 | 45.15 |
| VIT_07s0005g03340.t01 | Wine grape | nucleus | 36.34 | 44.98 |
| Bra015481.1-P | Field mustard | nucleus | 33.33 | 44.05 |
| AT2G31180.1 | Thale cress | nucleus | 32.73 | 43.78 |
| PGSC0003DMT400034878 | Potato | nucleus | 33.03 | 43.65 |
| Bra018267.1-P | Field mustard | nucleus | 33.03 | 43.48 |
| PGSC0003DMT400042007 | Potato | nucleus | 34.83 | 43.28 |
| Bra021708.1-P | Field mustard | nucleus | 32.43 | 43.2 |
| KRH31704 | Soybean | nucleus | 34.23 | 43.18 |
| Solyc06g053610.2.1 | Tomato | nucleus | 34.23 | 43.02 |
| KRH69121 | Soybean | nucleus | 33.93 | 42.8 |
| Solyc03g005570.2.1 | Tomato | nucleus | 31.83 | 42.23 |
| Bra022831.1-P | Field mustard | nucleus | 30.93 | 41.87 |
| KRG92419 | Soybean | nucleus | 33.93 | 41.54 |
| KRH25458 | Soybean | nucleus | 29.13 | 41.45 |
| KRH56060 | Soybean | nucleus | 28.53 | 41.3 |
| Solyc06g083900.2.1 | Tomato | nucleus | 31.23 | 40.78 |
| GSMUA_Achr6P31520_001 | Banana | nucleus | 29.73 | 40.57 |
| KRH22481 | Soybean | nucleus | 27.63 | 40.53 |
| GSMUA_Achr4P28850_001 | Banana | nucleus | 33.03 | 40.44 |
| KRH34387 | Soybean | nucleus | 33.33 | 40.36 |
| PGSC0003DMT400051682 | Potato | nucleus | 31.23 | 40.31 |
| VIT_12s0134g00480.t01 | Wine grape | nucleus | 30.93 | 40.08 |
| GSMUA_Achr11P... | Banana | nucleus | 34.23 | 39.72 |
| KRH67378 | Soybean | nucleus | 34.53 | 39.12 |
| KRH56061 | Soybean | nucleus | 28.23 | 38.84 |
| KRG95664 | Soybean | nucleus | 33.93 | 38.83 |
| KRH32183 | Soybean | nucleus | 27.63 | 38.82 |
| Solyc12g005640.1.1 | Tomato | nucleus | 26.73 | 38.2 |
| PGSC0003DMT400035748 | Potato | nucleus | 26.43 | 38.1 |
| GSMUA_Achr5P03520_001 | Banana | nucleus | 34.53 | 37.95 |
| PGSC0003DMT400067318 | Potato | nucleus | 27.33 | 37.45 |
| GSMUA_Achr2P18090_001 | Banana | nucleus | 33.93 | 37.29 |
| VIT_12s0134g00490.t01 | Wine grape | nucleus | 27.93 | 36.9 |
| Solyc03g093940.1.1 | Tomato | nucleus | 24.02 | 36.87 |
| PGSC0003DMT400097604 | Potato | nucleus | 23.12 | 36.67 |
| Solyc07g053230.2.1 | Tomato | nucleus | 27.63 | 36.65 |
| GSMUA_Achr4P27350_001 | Banana | nucleus | 32.73 | 36.33 |
| PGSC0003DMT400067321 | Potato | nucleus | 26.73 | 36.33 |
| PGSC0003DMT400067322 | Potato | nucleus | 26.73 | 36.33 |
| PGSC0003DMT400097096 | Potato | nucleus | 23.12 | 36.15 |
| Solyc07g054960.1.1 | Tomato | nucleus | 23.42 | 36.11 |
| KRH25468 | Soybean | nucleus | 25.23 | 35.9 |
| KRH56056 | Soybean | nucleus | 25.23 | 35.74 |
| Solyc07g055000.1.1 | Tomato | nucleus | 25.83 | 35.54 |
| VIT_00s0203g00170.t01 | Wine grape | nucleus | 28.53 | 35.45 |
| Solyc07g053240.2.1 | Tomato | nucleus | 25.83 | 34.54 |
| PGSC0003DMT400039029 | Potato | nucleus | 24.92 | 34.16 |
| Solyc06g033870.1.1 | Tomato | nucleus | 25.23 | 34.01 |
| KRH26874 | Soybean | nucleus | 24.92 | 33.07 |
| Solyc06g034000.1.1 | Tomato | nucleus | 23.42 | 33.05 |
| PGSC0003DMT400093355 | Potato | nucleus | 23.72 | 32.78 |
| Solyc03g093930.2.1 | Tomato | nucleus | 23.72 | 32.24 |
| PGSC0003DMT400051510 | Potato | nucleus | 23.12 | 31.69 |
| Solyc03g093890.2.1 | Tomato | nucleus | 24.02 | 31.62 |
| PGSC0003DMT400051513 | Potato | nucleus | 23.12 | 31.17 |
| PGSC0003DMT400070912 | Potato | nucleus | 24.32 | 31.15 |
| PGSC0003DMT400021498 | Potato | nucleus | 22.22 | 30.83 |
| KRH25461 | Soybean | nucleus | 26.73 | 29.18 |
| KRH56058 | Soybean | nucleus | 27.03 | 28.3 |
| KRH26875 | Soybean | nucleus | 26.43 | 28.11 |
| KRH56059 | Soybean | nucleus | 27.33 | 28.09 |
| PGSC0003DMT400086165 | Potato | nucleus | 24.02 | 27.87 |
| PGSC0003DMT400021503 | Potato | nucleus | 15.32 | 26.56 |
| PGSC0003DMT400021501 | Potato | nucleus | 15.62 | 26.4 |
| KRH25459 | Soybean | nucleus | 23.72 | 26.25 |
| Solyc07g054980.1.1 | Tomato | nucleus | 27.33 | 19.44 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | EnsemblPlantsGene:GSMUA_Achr5G18600_001 | EnsemblPlants:GSMUA_Achr5P18600_001 | EnsemblPlants:GSMUA_Achr5T18600_001 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:M0SZN9 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF695 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | TMHMM:TMhelix |
| UniParc:UPI000294E7D1 | SEG:seg | : | : | : | : |
Description
Myb-related protein Myb4 [Source:GMGC_GENE;Acc:GSMUA_Achr5G18600_001]
Coordinates
chr5:+:20088661..20092686
Molecular Weight (calculated)
37605.5 Da
IEP (calculated)
6.188
GRAVY (calculated)
-0.502
Length
333 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRAPCCDKV GLKKGAWSAE EDKILVDYIQ QHGHGNWRVM PKRAGLLRCG KSCRLRWTNY LRPDIKRGNF TKEEEDTIIS LHGELGNKWS AIAGSLPGRT
101: DNEIKNVWHT HLKKRMDPKE ATQNQRPDAD AARRSPRRDD AGLVEVSLEQ SYSGFSSAAT DSSVMSGDAT VDAKDESFTS KELKEIDESF WLDAFAVDGS
201: LQLPPAAVAD SAAFSDDMEF WLKVFMEADH LEDPSQMNPA NTAYTRKRKD AERRGDEVYV AKLEKAYDII MVSQLHSRKG LTFGNFMDVS KDIKYADKQP
301: IVSWGPRYLF ELCIEMGLCF IIIAIWFISV SFT
101: DNEIKNVWHT HLKKRMDPKE ATQNQRPDAD AARRSPRRDD AGLVEVSLEQ SYSGFSSAAT DSSVMSGDAT VDAKDESFTS KELKEIDESF WLDAFAVDGS
201: LQLPPAAVAD SAAFSDDMEF WLKVFMEADH LEDPSQMNPA NTAYTRKRKD AERRGDEVYV AKLEKAYDII MVSQLHSRKG LTFGNFMDVS KDIKYADKQP
301: IVSWGPRYLF ELCIEMGLCF IIIAIWFISV SFT
001: MGRAPCCEKM GVKRGPWTPE EDQILINYIH LYGHSNWRAL PKHAGLLRCG KSCRLRWINY LRPDIKRGNF TPQEEQTIIN LHESLGNRWS AIAAKLPGRT
101: DNEIKNVWHT HLKKRLSKNL NNGGDTKDVN GINETTNEDK GSVIVDTASL QQFSNSITTF DISNDNKDDI MSYEDISALI DDSFWSDVIS VDNSNKNEKK
201: IEDWEGLIDR NSKKCSYSNS KLYNDDMEFW FDVFTSNRRI EEFSDIPEF
101: DNEIKNVWHT HLKKRLSKNL NNGGDTKDVN GINETTNEDK GSVIVDTASL QQFSNSITTF DISNDNKDDI MSYEDISALI DDSFWSDVIS VDNSNKNEKK
201: IEDWEGLIDR NSKKCSYSNS KLYNDDMEFW FDVFTSNRRI EEFSDIPEF
Arabidopsis Description
MYB14Transcription factor MYB14 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJX8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.