CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d039674_P001	Maize	plastid	93.57	94.7
TraesCS3B01G149400.1	Wheat	plastid	72.86	76.69
TraesCS3A01G130300.1	Wheat	plastid	72.38	76.57
TraesCS3D01G131200.1	Wheat	plastid	72.38	76.38
Os01t0172100-01	Rice	plastid	71.19	76.08
EES17796	Sorghum	plastid	59.05	61.85
HORVU3Hr1G024590.1	Barley	peroxisome	59.05	60.64
KRG93252	Soybean	plastid	50.71	52.21
EES07792	Sorghum	plastid	48.57	51.39
Solyc02g086650.2.1	Tomato	plastid	47.86	50.63
PGSC0003DMT400001273	Potato	plastid	47.62	50.38
AT3G01550.1	Thale cress	mitochondrion, plastid	45.71	50.13
Bra001003.1-P	Field mustard	plastid	45.0	49.61
CDX74305	Canola	plastid	45.0	49.48
VIT_14s0066g01000.t01	Wine grape	mitochondrion, plastid	50.24	48.96
CDX91942	Canola	plastid	43.81	48.04
OQU89208	Sorghum	plastid	50.48	44.44
OQU90029	Sorghum	cytosol, plasma membrane, vacuole	22.14	37.35
EES13461	Sorghum	plastid	29.76	32.3
EER99986	Sorghum	plastid	28.57	29.56
OQU77692	Sorghum	plastid	27.86	28.12

Protein Annotations

MapMan:24.2.1.1.1	EntrezGene:8078480	UniProt:A0A1B6Q1E7	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0015121	GO:GO:0015714	GO:GO:0016020	GO:GO:0016021
GO:GO:0022857	GO:GO:0035436	GO:GO:0055085	GO:GO:0071917	GO:GO:0089722	EnsemblPlants:KXG31751
ProteinID:KXG31751	ProteinID:KXG31751.2	PFAM:PF03151	PANTHER:PTHR43973	PANTHER:PTHR43973:SF5	EnsemblPlantsGene:SORBI_3003G050800
SUPFAM:SSF103481	InterPro:Sugar_P_trans_dom	TIGRFAMs:TIGR00817	TMHMM:TMhelix	InterPro:Tpt_PEP_transl	UniParc:UPI0001A850AE
RefSeq:XP_002457265.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:4607904..4610988

Molecular Weight (calculated)

43947.9 Da

IEP (calculated)

10.676

GRAVY (calculated)

0.531

Length

420 amino acids

Sequence
(BLAST)

001: MMMQRGAAAA GTTSVSGASS WTRAATRGLA SRHVGVASSS SSFFGPRGAT AAAQRLPLLR VRGGDGRLRP LSLLSDSGGK NGEVAKAVAA AAAASVPADD
101: ASAAAVTGDR GGIAATAQLG AMIVAWYLLN IYFNIYNKQV LGALPLPLPY TITAFQLAFG SLLIFLMWAT RLHPVPRLSA AQLGKIAPLA VGHMLGTVFT
201: NMSLGKVAVS FTHTIKASEP FFTVVLSALF LGEVPSLPVL GSLVPIVGGV ALASFTEVSF NWTGFWSAMA SNLTNQSRNV LSKKLLAGDK DVMDDINLFS
301: VITVLSFLLS CPLMFFAEGI KFTPGYLQST GLNLQELCVR AALAGLCFHG YQKLSYLILS RVSPVTHSVA NCVKRVVVIV SSVLFFSTPI SPVNALGTGA
401: ALAGVFLYSR LTRTKKPKDA

Best Arabidopsis Sequence Match ( AT5G33320.1 )
(BLAST)

001: MQSSAVFSLS PSLPLLKPRR LSLRHHPITT AASSSDLNVS PNVVSIPSLS RRSWRLASSD SPLRAWSGVP SPISHSLDTN RFRTAATAVP ESAEEGDNSG
101: KLTKVLELGL LFAMWYLFNI YFNIYNKQVL KALHAPMTVT LVQFAVGSVL ITIMWVLNLY KRPKISGAQL AAILPLAVVH TLGNLFTNMS LGKVSVSFTH
201: TIKAMEPFFS VLLSAMFLGE KPTPWVLGAI VPIVGGVALA SISEVSFNWA GFSSAMASNL TNQSRNVLSK KVMVKKDDSL DNITLFSIIT LMSLVLMAPV
301: TFFTEGIKFT PSYIQSAGVN VKQIYTKSLI AALCFHAYQQ VSYMILARVS PVTHSVGNCV KRVVVIVSSV IFFKTPVSPV NAFGTGIALA GVFLYSRVKG
401: IKPKPKTA

Arabidopsis Description

PPT1Phosphoenolpyruvate/phosphate translocator 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8RXN3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.