Factsheet for GSMUA_Achr1P25520_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P28500_001	Banana	plasma membrane	66.58	72.01
GSMUA_Achr8P31900_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	74.62	68.75
Os09t0297400-01	Rice	plastid	65.83	64.22
Zm00001d032383_P001	Maize	plastid	62.81	63.29
Os08t0344600-01	Rice	plastid	64.07	62.65
EES07792	Sorghum	plastid	62.31	62.47
TraesCS5B01G175700.2	Wheat	golgi	62.06	61.6
TraesCS5A01G178100.1	Wheat	plastid	62.06	61.6
VIT_17s0000g08560.t01	Wine grape	plastid	63.32	61.46
TraesCS5D01G182500.1	Wheat	plastid	61.81	61.35
KRH03277	Soybean	plastid	58.79	61.26
Zm00001d020004_P002	Maize	plastid	63.32	59.72
KRH63546	Soybean	endoplasmic reticulum, mitochondrion, plastid	59.05	59.34
Solyc03g112870.2.1	Tomato	plastid	61.06	59.27
PGSC0003DMT400046741	Potato	plastid	60.8	59.02
KRH54382	Soybean	endoplasmic reticulum, mitochondrion, plastid	60.05	58.87
CDY12390	Canola	plastid	59.3	58.71
Bra038952.1-P	Field mustard	plastid	59.3	58.27
CDY47555	Canola	plastid	59.3	57.99
AT5G33320.1	Thale cress	plastid	58.79	57.35
Zm00001d005542_P001	Maize	plastid	61.81	57.08
HORVU5Hr1G054180.1	Barley	mitochondrion, plastid	61.31	54.83
GSMUA_Achr2P14180_001	Banana	plastid	57.04	54.05
OQU89208	Sorghum	plastid	64.57	53.88
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular	6.28	39.68
GSMUA_Achr2P14020_001	Banana	vacuole	21.11	35.15
GSMUA_Achr7P03380_001	Banana	plastid	31.66	32.06
GSMUA_Achr9P11730_001	Banana	plastid	31.41	31.17
GSMUA_Achr4P33530_001	Banana	plastid	31.16	29.95
GSMUA_Achr8P07300_001	Banana	mitochondrion, plastid	31.66	28.97
GSMUA_Achr3P03200_001	Banana	plastid	28.89	28.12
GSMUA_Achr10P...	Banana	plastid	27.89	27.07
GSMUA_Achr10P...	Banana	cytosol, plasma membrane, plastid	29.65	26.64
GSMUA_Achr6P01190_001	Banana	plastid	29.4	26.47

Protein Annotations

MapMan:24.2.1.1.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	EnsemblPlantsGene:GSMUA_Achr1G25520_001	EnsemblPlants:GSMUA_Achr1P25520_001
EnsemblPlants:GSMUA_Achr1T25520_001	UniProt:M0S309	PFAM:PF03151	PANTHER:PTHR43973	PANTHER:PTHR43973:SF8	SUPFAM:SSF103481
InterPro:Sugar_P_trans_dom	TIGRFAMs:TIGR00817	TMHMM:TMhelix	InterPro:Tpt_PEP_transl	UniParc:UPI0002952371	SEG:seg

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr1G25520_001]

Coordinates

chr1:+:19842130..19848524

Molecular Weight (calculated)

43100.3 Da

IEP (calculated)

11.041

GRAVY (calculated)

0.416

Length

398 amino acids

Sequence
(BLAST)

001: MQSAAISPSA APPLLRSSTK PPAPRWSPLL LPLHRGGPRL RPLAAVPSFS GCCRRCSSGR CLVSGTSSTS TSTSTISRHV SPRRLDAFSC KPGTGYSNSS
101: WPDTVTLLKA EPGRIFANTR VLKGFTFPLT ITTVQFAVGT FLVLFMWTTN LYKRPKISAS QLAVILPLAM VHTMGNLFTN MSLGKVAVSF THTIKAMEPF
201: FSVLLSALFL GEMPTIWVLL SLVPIVGGVG LASLTEASFN WAGFWSAMAS NLTFQSRNVL SKKAMVKKEE SLDNINLFSI ITIMSFCLLA PATFFVEGIK
301: VTPSYLQSAG LNFKEIYLRS LLAALCFHAY QQVSYMILAR VSPVTHSVGN CVKRVVVIVT SVLFFRTPVS PINSLGTGVA LAGVFLYSRV KKIKPKSA

Best Arabidopsis Sequence Match ( AT5G33320.1 )
(BLAST)

001: MQSSAVFSLS PSLPLLKPRR LSLRHHPITT AASSSDLNVS PNVVSIPSLS RRSWRLASSD SPLRAWSGVP SPISHSLDTN RFRTAATAVP ESAEEGDNSG
101: KLTKVLELGL LFAMWYLFNI YFNIYNKQVL KALHAPMTVT LVQFAVGSVL ITIMWVLNLY KRPKISGAQL AAILPLAVVH TLGNLFTNMS LGKVSVSFTH
201: TIKAMEPFFS VLLSAMFLGE KPTPWVLGAI VPIVGGVALA SISEVSFNWA GFSSAMASNL TNQSRNVLSK KVMVKKDDSL DNITLFSIIT LMSLVLMAPV
301: TFFTEGIKFT PSYIQSAGVN VKQIYTKSLI AALCFHAYQQ VSYMILARVS PVTHSVGNCV KRVVVIVSSV IFFKTPVSPV NAFGTGIALA GVFLYSRVKG
401: IKPKPKTA

Arabidopsis Description

PPT1Phosphoenolpyruvate/phosphate translocator 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8RXN3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.