Factsheet for TraesCS5B01G175700.2

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	mitochondrion
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

golgi: 23128297

msms, gfp PMID: 23128297 doi

M Suliman, AL Chateigner-Boutin, M Francin-Allami, A Partier, B Bouchet, J Salse, C Pont, J Marion, H Rogniaux, D Tessier, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G178100.1	Wheat	plastid	98.5	98.5
TraesCS5D01G182500.1	Wheat	plastid	98.0	98.0
Os09t0297400-01	Rice	plastid	82.04	80.64
HORVU5Hr1G054180.1	Barley	mitochondrion, plastid	86.78	78.2
Zm00001d020004_P002	Maize	plastid	79.3	75.36
Zm00001d005542_P001	Maize	plastid	79.05	73.55
GSMUA_Achr3P28500_001	Banana	plasma membrane	63.34	69.02
OQU89208	Sorghum	plastid	81.55	68.55
KRH63546	Soybean	endoplasmic reticulum, mitochondrion, plastid	64.84	65.66
KRH03277	Soybean	plastid	62.34	65.44
KRH54382	Soybean	endoplasmic reticulum, mitochondrion, plastid	65.59	64.78
VIT_17s0000g08560.t01	Wine grape	plastid	65.59	64.15
PGSC0003DMT400046741	Potato	plastid	64.34	62.93
Solyc03g112870.2.1	Tomato	plastid	63.84	62.44
CDY12390	Canola	plastid	62.59	62.44
Bra038952.1-P	Field mustard	plastid	62.84	62.22
GSMUA_Achr1P25520_001	Banana	plastid	61.6	62.06
CDY47555	Canola	plastid	62.84	61.92
GSMUA_Achr8P31900_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	66.33	61.57
AT5G33320.1	Thale cress	plastid	62.59	61.52
TraesCS3B01G149400.1	Wheat	plastid	52.37	52.63
TraesCS1B01G135100.1	Wheat	plastid	52.87	51.71
TraesCS2B01G245900.1	Wheat	plastid	34.16	35.68
TraesCS1B01G094300.1	Wheat	plastid	31.17	30.79
TraesCS3B01G192400.1	Wheat	mitochondrion, plastid	30.67	30.6
TraesCS7B01G178500.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	33.67	28.01

Protein Annotations

MapMan:24.2.1.1.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0009670	GO:GO:0015121	GO:GO:0015714	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857
GO:GO:0035436	GO:GO:0055085	PFAM:PF03151	PANTHER:PTHR43973	PANTHER:PTHR43973:SF2	SUPFAM:SSF103481
InterPro:Sugar_P_trans_dom	TIGRFAMs:TIGR00817	TMHMM:TMhelix	InterPro:Tpt_PEP_transl	EnsemblPlantsGene:TraesCS5B01G175700	EnsemblPlants:TraesCS5B01G175700.2
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5B:-:321555815..321559763

Molecular Weight (calculated)

42692.1 Da

IEP (calculated)

10.685

GRAVY (calculated)

0.595

Length

401 amino acids

Sequence
(BLAST)

001: MQSAAAIGLL RPCAARPILK SPSPGAARLP ASRTALRLPA AAPRAGLVAA AGLGRIGLVP ASPEQEKRSD CLVAAAAAGK ASAGEEAGEE SGAALAKTLQ
101: LGVFFGLWYL FNIYFNIYNK QVLKVFPYPI NITTVQFAVG TTISLFMWAT GILKRPKISG AQLLAILPLA IVHTMGNLFT NMSLGKVAVS FTHTIKAMEP
201: FFSVLLSAMF LGELPTPWVV LSLLPIVGGV ALASISEASF NWAGFLSAMA SNVTFQSRNV LSKKLMLKKE ASLDNINLFS IITVMSFFLL APVTLLTEGV
301: KVTPTYLQSA GLNLQQVYTR SLIAAFCFHA YQQVSYMILA RVSPVTHSVG NCVKRVVVIV TSVLFFKTPV SPINSIGTAI ALAGVFLYSQ LKRLQPKPKA
401: A

Best Arabidopsis Sequence Match ( AT5G33320.1 )
(BLAST)

001: MQSSAVFSLS PSLPLLKPRR LSLRHHPITT AASSSDLNVS PNVVSIPSLS RRSWRLASSD SPLRAWSGVP SPISHSLDTN RFRTAATAVP ESAEEGDNSG
101: KLTKVLELGL LFAMWYLFNI YFNIYNKQVL KALHAPMTVT LVQFAVGSVL ITIMWVLNLY KRPKISGAQL AAILPLAVVH TLGNLFTNMS LGKVSVSFTH
201: TIKAMEPFFS VLLSAMFLGE KPTPWVLGAI VPIVGGVALA SISEVSFNWA GFSSAMASNL TNQSRNVLSK KVMVKKDDSL DNITLFSIIT LMSLVLMAPV
301: TFFTEGIKFT PSYIQSAGVN VKQIYTKSLI AALCFHAYQQ VSYMILARVS PVTHSVGNCV KRVVVIVSSV IFFKTPVSPV NAFGTGIALA GVFLYSRVKG
401: IKPKPKTA

Arabidopsis Description

PPT1Phosphoenolpyruvate/phosphate translocator 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8RXN3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.