Factsheet for Zm00001d032283_P004

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 1
mitochondrion 3
nucleus 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plasma membrane
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d004744_P001
Zm00001d007394_P001
Zm00001d010201_P001
Zm00001d012255_P001
Zm00001d012549_P001
Zm00001d013738_P005
Zm00001d014233_P001
Zm00001d017901_P001
Zm00001d017927_P001
Zm00001d030306_P009
Zm00001d034088_P001
Zm00001d037659_P001
Zm00001d038338_P001
Zm00001d039674_P001
Zm00001d041650_P001
Zm00001d041853_P001
Zm00001d042665_P001
Zm00001d044715_P001
Zm00001d050595_P001
Zm00001d051000_P001
Zm00001d051760_P001
Zm00001d053060_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G46550.1	Zm00001d013738_P005	AT1G54770.1	21798944
AT2G46550.1	Zm00001d014233_P001	AT1G54770.1	21798944
AT2G46550.1	Zm00001d017927_P001	AT1G54770.1	21798944
AT2G46550.1	Zm00001d030306_P009	AT1G54770.1	21798944
AT2G46550.1	Zm00001d051760_P001	AT1G54770.1	21798944
AT2G46550.1	Zm00001d017901_P001	AT3G01550.1	21798944
AT2G46550.1	Zm00001d034088_P001	AT3G01550.1	21798944
AT2G46550.1	Zm00001d037659_P001	AT3G01550.1	21798944
AT2G46550.1	Zm00001d039674_P001	AT3G01550.1	21798944
AT2G46550.1	Zm00001d044715_P001	AT3G01550.1	21798944
AT2G46550.1	Zm00001d051000_P001	AT3G01550.1	21798944
AT2G46550.1	Zm00001d012549_P001	AT3G60360.1	21798944
AT2G46550.1	Zm00001d041650_P001	AT3G60360.1	21798944
AT2G46550.1	Zm00001d050595_P001	AT3G60360.1	21798944
AT2G46550.1	Zm00001d004744_P001	AT4G09460.1	21798944
AT2G46550.1	Zm00001d010201_P001	AT4G09460.1	21798944
AT2G46550.1	Zm00001d012255_P001	AT4G09460.1	21798944
AT2G46550.1	Zm00001d038338_P001	AT4G09460.1	21798944
AT2G46550.1	Zm00001d041853_P001	AT4G09460.1	21798944
AT2G46550.1	Zm00001d042665_P001	AT4G09460.1	21798944
AT2G46550.1	Zm00001d053060_P001	AT4G09460.1	21798944
AT2G46550.1	Zm00001d007394_P001	AT5G51010.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES13800	Sorghum	mitochondrion	90.81	90.81
Os08t0400300-01	Rice	nucleus	61.17	60.91
GSMUA_Achr7P24360_001	Banana	nucleus	17.12	50.0
Zm00001d020233_P001	Maize	mitochondrion	46.76	48.07
Zm00001d005653_P001	Maize	nucleus	44.47	45.71
GSMUA_Achr3P32190_001	Banana	mitochondrion, nucleus	31.73	38.29
CDY68438	Canola	nucleus	4.8	36.51
CDX99425	Canola	nucleus	4.8	36.51
AT1G01240.3	Thale cress	mitochondrion	24.22	35.05
CDX85174	Canola	nucleus	14.82	34.8
GSMUA_Achr4P09100_001	Banana	cytosol	34.66	34.66
CDY61731	Canola	nucleus	22.34	34.19
CDY15190	Canola	mitochondrion	22.13	34.08
CDY27317	Canola	nucleus	22.76	33.54
CDX90019	Canola	mitochondrion	23.17	33.13
Solyc01g096100.2.1	Tomato	nucleus	32.57	32.91
Bra032629.1-P	Field mustard	mitochondrion	23.17	32.84
PGSC0003DMT400000655	Potato	mitochondrion	32.15	32.77
Bra039276.1-P	Field mustard	nucleus	23.17	32.74
CDY38000	Canola	mitochondrion	22.96	32.35
AT2G46550.1	Thale cress	nucleus, plastid	26.51	31.99
CDX80028	Canola	nucleus, plastid	25.68	31.62
Bra004527.1-P	Field mustard	nucleus, plastid	25.68	31.62
Bra039275.1-P	Field mustard	nucleus	11.69	31.28
CDY56879	Canola	nucleus	24.84	30.51
Bra033275.1-P	Field mustard	mitochondrion	19.21	30.16
VIT_16s0098g01690.t01	Wine grape	nucleus, plastid	31.11	29.33
KRH64409	Soybean	nucleus	25.68	26.62
KRH53526	Soybean	nucleus	25.26	26.25
PGSC0003DMT400047670	Potato	nucleus	20.67	24.32
Solyc03g083000.2.1	Tomato	nucleus	20.46	24.14

Protein Annotations

EMBL:BT063009	EMBL:BT087776	EMBL:EU967599	EnsemblPlants:Zm00001d032283_P004	EnsemblPlants:Zm00001d032283_T004	EnsemblPlantsGene:Zm00001d032283
EntrezGene:100277248	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	PANTHER:PTHR33868	PANTHER:PTHR33868:SF1
ProteinID:ONM04767.1	ProteinID:ONM04768.1	ProteinID:ONM04769.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI000182DA8B
UniProt:B6TRI4	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr1:+:220368924..220372532

Molecular Weight (calculated)

53742.7 Da

IEP (calculated)

7.137

GRAVY (calculated)

-0.571

Length

479 amino acids

Sequence
(BLAST)

001: MAAAEARAAW QRAANRCLVQ EDRKRAPKLA CCPSSAEQHG TNNGNCRNSV DRPICSLMPL SCNPMHSNLP PDVRWWVQSQ PNFGIQKDIV SKRLCSLGRD
101: IHEKQVEDSV PQPKHEETLL CQAVDTSTEK IGDALEPPWM VSPAFTKYSL ETGLEEMKTV GSYSQVSKCI ETLSNCLYKD NEFPDFECID PAPLKNPDKA
201: NFDIDAPWKG EKTRPWWQIA DEDQLASLVA ERATQHIENC DLPRPTQTVR INRTEPYTQK HIGDFGGPSS PAGRVSHPVP GHCDHIECTY STGSTDELVL
301: LYGNGVWEQH GSSDTYSVVQ HFSSSSTTGL ESKQTLRNGS ERDMILEALR HSQTRAREAD MAAKKAYNEK DDVIKLLLRQ ASHLFACNQW LKIMQLENIV
401: LQLKNKEHQI AAIIPELPWL TLKEKPTQGQ GQRDWTRRKG RRQKKAAGFF DAILFAVGLG LAGAGFLLGW TLGWLLPKF

Best Arabidopsis Sequence Match ( AT2G46550.1 )
(BLAST)

001: MAAAEARAVW QRTVNRCFVQ EDAKRAPKLT YCQSSSSSTA SSTKQVEVSG SSPRVSVEPR TQSSCAGFMP LPRNPNFPDL LPHNTRLWSH PHHQFQVNKK
101: QPLEDEVNNQ GVSEKKSELG AGEKQGKSFN SESFQEFIEL METRESYGST GYDESSEKKL SELSFDPSSP WNLLSSEKAA PWWRTTDKDE LASLVAQRSL
201: DYVENCDLPT PQKMKRSYYG SPRGFDSDGL RDYSVSGQTI KGTSKGSSCK NRPEASSESD LSKSELLEAL RRSQTRAREA ENMAKEAYAE KEHLVKILLK
301: QAAELFGYKQ WLQLLQLEAL YLQIKNKEID NKNNDDPGVS IPCWSNGKAR KEGRKRRSKR GKPNGAKYAV GLALGMSLVG AGLLLGWTVG WMQMLSF

Arabidopsis Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9ZPY4]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.