CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH53526	Soybean	nucleus	77.92	78.09
GSMUA_Achr7P24360_001	Banana	nucleus	16.67	46.95
VIT_16s0098g01690.t01	Wine grape	nucleus, plastid	39.83	36.22
KRH68927	Soybean	nucleus	31.17	33.8
KRG97204	Soybean	nucleus	30.74	33.33
GSMUA_Achr3P32190_001	Banana	mitochondrion, nucleus	28.14	32.75
KRH47890	Soybean	cytosol, mitochondrion	28.79	29.95
KRH06447	Soybean	cytosol, mitochondrion	28.57	29.66
Zm00001d020233_P001	Maize	mitochondrion	29.22	28.97
KXG35486	Sorghum	cytosol, mitochondrion, nucleus, plasma membrane	29.22	28.78
TraesCS5D01G198100.1	Wheat	cytosol, mitochondrion	29.0	28.63
Zm00001d005653_P001	Maize	nucleus	28.79	28.54
TraesCS5B01G190300.1	Wheat	cytosol, mitochondrion	28.57	28.33
Os08t0400300-01	Rice	nucleus	29.44	28.27
GSMUA_Achr4P09100_001	Banana	cytosol	29.0	27.97
Os09t0363500-01	Rice	mitochondrion	27.92	27.86
HORVU5Hr1G057510.3	Barley	cytosol, mitochondrion	27.92	27.86
TraesCS5A01G194900.2	Wheat	cytosol, mitochondrion	28.36	27.41
Zm00001d032283_P004	Maize	mitochondrion	26.62	25.68
EES13800	Sorghum	mitochondrion	25.32	24.43

Protein Annotations

EMBL:ACUP02002765	EnsemblPlants:KRH64409	EnsemblPlantsGene:GLYMA_04G234400	EntrezGene:100805767	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	PANTHER:PTHR33868	PANTHER:PTHR33868:SF8	ProteinID:KRH64409	ProteinID:KRH64409.1	ProteinID:KRH64410.1
ProteinID:KRH64411.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002339F16	UniProt:K7KLW5	MapMan:35.2

Description

hypothetical protein

Coordinates

chr4:+:50285732..50290102

Molecular Weight (calculated)

51685.4 Da

IEP (calculated)

7.360

GRAVY (calculated)

-0.628

Length

462 amino acids

Sequence
(BLAST)

001: MASAEGKAPY TANCFTQDFR IPPSSPDHPS SVSKTIVSDW VPSNSINDQI HANAVCIPHN LNSDKLPEMK WWLHVKSDLG DEANYTCQQL NSYESELGTF
101: YSEFLNGSVK SGGDQLVKDF DALSNIQSAN LSIEQPWHVV SPTCMKNNNT RMPKFEASLN TDLHFTPKKK DQEEFYFQDS HFMDCDISNF LVSEQGKMAS
201: SDLESHLMGA EKTGAWWRTT GKDELASLVA RKSLEHIENC DLPQPQTKHV SQRPSYPKGV DHDNTPPSSL NRKTETGSSY ADSYTTGIST SDCSFQDSNK
301: HSSSSQSKDF SSSTEGCQIN SENGSVSELL KALCHSQTRA REAEKAAQRA YSEKEHILSL FFRQASQLFA YKQWLHMLQL ENLCLQLRNK NQSFPNLFPA
401: SLPWDPCRGR LLKKSHSKAR KRKNSNRRCV ITKCAVAFAV GLGLAGAGLL LGWTMGWMFP PL

Best Arabidopsis Sequence Match ( AT2G46550.1 )
(BLAST)

001: MAAAEARAVW QRTVNRCFVQ EDAKRAPKLT YCQSSSSSTA SSTKQVEVSG SSPRVSVEPR TQSSCAGFMP LPRNPNFPDL LPHNTRLWSH PHHQFQVNKK
101: QPLEDEVNNQ GVSEKKSELG AGEKQGKSFN SESFQEFIEL METRESYGST GYDESSEKKL SELSFDPSSP WNLLSSEKAA PWWRTTDKDE LASLVAQRSL
201: DYVENCDLPT PQKMKRSYYG SPRGFDSDGL RDYSVSGQTI KGTSKGSSCK NRPEASSESD LSKSELLEAL RRSQTRAREA ENMAKEAYAE KEHLVKILLK
301: QAAELFGYKQ WLQLLQLEAL YLQIKNKEID NKNNDDPGVS IPCWSNGKAR KEGRKRRSKR GKPNGAKYAV GLALGMSLVG AGLLLGWTVG WMQMLSF

Arabidopsis Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9ZPY4]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.