Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 2
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P24360_001 | Banana | nucleus | 19.42 | 56.71 |
| GSMUA_Achr3P32190_001 | Banana | mitochondrion, nucleus | 41.75 | 50.38 |
| HORVU5Hr1G057510.3 | Barley | cytosol, mitochondrion | 36.33 | 37.58 |
| TraesCS5B01G190300.1 | Wheat | cytosol, mitochondrion | 35.91 | 36.91 |
| TraesCS5D01G198100.1 | Wheat | cytosol, mitochondrion | 35.91 | 36.75 |
| KXG35486 | Sorghum | cytosol, mitochondrion, nucleus, plasma membrane | 35.91 | 36.67 |
| Os09t0363500-01 | Rice | mitochondrion | 35.28 | 36.5 |
| TraesCS5A01G194900.2 | Wheat | cytosol, mitochondrion | 36.12 | 36.19 |
| Zm00001d020233_P001 | Maize | mitochondrion | 34.86 | 35.84 |
| Os08t0400300-01 | Rice | nucleus | 35.49 | 35.34 |
| Zm00001d005653_P001 | Maize | nucleus | 34.24 | 35.19 |
| Zm00001d032283_P004 | Maize | mitochondrion | 34.66 | 34.66 |
| EES13800 | Sorghum | mitochondrion | 34.03 | 34.03 |
| VIT_16s0098g01690.t01 | Wine grape | nucleus, plastid | 32.36 | 30.51 |
| KRH53526 | Soybean | nucleus | 28.18 | 29.28 |
| KRH64409 | Soybean | nucleus | 27.97 | 29.0 |
| GSMUA_AchrUn_... | Banana | cytosol | 8.77 | 17.87 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr4P09100_001 | EnsemblPlants:GSMUA_Achr4T09100_001 | EnsemblPlantsGene:GSMUA_Achr4G09100_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR33868 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000295D005 | UniProt:M0SMC7 | MapMan:35.2 |
Description
Putative expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G09100_001]
Coordinates
chr4:+:6621924..6625443
Molecular Weight (calculated)
54558.9 Da
IEP (calculated)
9.069
GRAVY (calculated)
-0.359
Length
479 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAEARHAW QRTLNRCLVQ EDAKRAPKLA CCPSSTPQTD SSNGNAASTH DCPVANFIPL NRNQMNPNLS PETKWWLQIQ PNYVYHKDFI CEQLCFSRDE
101: VDEKDMKTTI PTSKMDGDSS PVDSINLVLK NEESSMESPW IVSTAFMKHG PETSVKEMNI MAINKSEPWW HIADKDELAS LVAQKSLQHI ENCDLPKPTQ
201: TVHVARDPFS SPDNLNTRGR LQSSFTILCS HAQGRSNMEH HEINQPSESD RTRAQLLDAL RRSQTRARKA EMAAQKAFDE KEHIVKLLFR EASHLFAYKQ
301: WLLMLQLENL CLQLKIKDHQ LSTLVPVLPW MPSKEKLFSK DKITSRKVRK KHNCSMCKYA VLFAVGLGLV GAGLLFGWTI GWLFPLNCTL YPARPTFSIH
401: LFLRFLAALF FDFLLRILYR GFVVHLVRHR LGRRGSGRWR EGMHLPMLFE EASKIPLHGF RILCRSGGSE EGNPGVAAL
101: VDEKDMKTTI PTSKMDGDSS PVDSINLVLK NEESSMESPW IVSTAFMKHG PETSVKEMNI MAINKSEPWW HIADKDELAS LVAQKSLQHI ENCDLPKPTQ
201: TVHVARDPFS SPDNLNTRGR LQSSFTILCS HAQGRSNMEH HEINQPSESD RTRAQLLDAL RRSQTRARKA EMAAQKAFDE KEHIVKLLFR EASHLFAYKQ
301: WLLMLQLENL CLQLKIKDHQ LSTLVPVLPW MPSKEKLFSK DKITSRKVRK KHNCSMCKYA VLFAVGLGLV GAGLLFGWTI GWLFPLNCTL YPARPTFSIH
401: LFLRFLAALF FDFLLRILYR GFVVHLVRHR LGRRGSGRWR EGMHLPMLFE EASKIPLHGF RILCRSGGSE EGNPGVAAL
001: MAAAEARAVW QRTVNRCFVQ EDAKRAPKLT YCQSSSSSTA SSTKQVEVSG SSPRVSVEPR TQSSCAGFMP LPRNPNFPDL LPHNTRLWSH PHHQFQVNKK
101: QPLEDEVNNQ GVSEKKSELG AGEKQGKSFN SESFQEFIEL METRESYGST GYDESSEKKL SELSFDPSSP WNLLSSEKAA PWWRTTDKDE LASLVAQRSL
201: DYVENCDLPT PQKMKRSYYG SPRGFDSDGL RDYSVSGQTI KGTSKGSSCK NRPEASSESD LSKSELLEAL RRSQTRAREA ENMAKEAYAE KEHLVKILLK
301: QAAELFGYKQ WLQLLQLEAL YLQIKNKEID NKNNDDPGVS IPCWSNGKAR KEGRKRRSKR GKPNGAKYAV GLALGMSLVG AGLLLGWTVG WMQMLSF
101: QPLEDEVNNQ GVSEKKSELG AGEKQGKSFN SESFQEFIEL METRESYGST GYDESSEKKL SELSFDPSSP WNLLSSEKAA PWWRTTDKDE LASLVAQRSL
201: DYVENCDLPT PQKMKRSYYG SPRGFDSDGL RDYSVSGQTI KGTSKGSSCK NRPEASSESD LSKSELLEAL RRSQTRAREA ENMAKEAYAE KEHLVKILLK
301: QAAELFGYKQ WLQLLQLEAL YLQIKNKEID NKNNDDPGVS IPCWSNGKAR KEGRKRRSKR GKPNGAKYAV GLALGMSLVG AGLLLGWTVG WMQMLSF
Arabidopsis Description
Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9ZPY4]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.