CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH64409	Soybean	nucleus	78.09	77.92
GSMUA_Achr7P24360_001	Banana	nucleus	16.49	46.34
VIT_16s0098g01690.t01	Wine grape	nucleus, plastid	39.7	36.02
KRH68927	Soybean	nucleus	30.59	33.1
KRG97204	Soybean	nucleus	30.37	32.86
GSMUA_Achr3P32190_001	Banana	mitochondrion, nucleus	27.33	31.74
Zm00001d020233_P001	Maize	mitochondrion	31.02	30.69
KXG35486	Sorghum	cytosol, mitochondrion, nucleus, plasma membrane	30.15	29.64
Zm00001d005653_P001	Maize	nucleus	29.72	29.4
KRH47890	Soybean	cytosol, mitochondrion	27.77	28.83
KRH06447	Soybean	cytosol, mitochondrion	27.55	28.54
Os09t0363500-01	Rice	mitochondrion	28.63	28.51
TraesCS5D01G198100.1	Wheat	cytosol, mitochondrion	28.63	28.21
GSMUA_Achr4P09100_001	Banana	cytosol	29.28	28.18
TraesCS5B01G190300.1	Wheat	cytosol, mitochondrion	28.2	27.9
Os08t0400300-01	Rice	nucleus	29.07	27.86
HORVU5Hr1G057510.3	Barley	cytosol, mitochondrion	27.55	27.43
TraesCS5A01G194900.2	Wheat	cytosol, mitochondrion	27.98	26.99
Zm00001d032283_P004	Maize	mitochondrion	26.25	25.26
EES13800	Sorghum	mitochondrion	25.6	24.63

Protein Annotations

EMBL:ACUP02003472	EnsemblPlants:KRH53526	EnsemblPlantsGene:GLYMA_06G130200	EntrezGene:100782455	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	PANTHER:PTHR33868	PANTHER:PTHR33868:SF8	ProteinID:KRH53523.1	ProteinID:KRH53524.1	ProteinID:KRH53525.1
ProteinID:KRH53526	ProteinID:KRH53526.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI00023C3A2A	UniProt:K7KUT7
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:10701746..10706097

Molecular Weight (calculated)

51554.6 Da

IEP (calculated)

7.561

GRAVY (calculated)

-0.584

Length

461 amino acids

Sequence
(BLAST)

001: MASAEGKAPY TANCFTQDFR IPLSSLDHPS SVSKKLVSDW VPNNSINDQI LSNSVFVPHN LNSDKLPEMK WWLHVKSDLG DEANYTCQQL NSYESELGSF
101: YAEFLNGSAK SGGDQLVKDF DFLSNIESAN LYVEQPWHVV SPTCMKNNTR MPKIEASLNN TDLHFTPKKK DQEEFYFSDS HFMDCDISNF LVSEQGKMTS
201: SDLESHLMGA EKTGPWWRTA GKDELASLVA RKSLEHIGNC DLPHPQTKHV SPRPPYPKGV DHHDKTPPSL NRKTETGSSY ADGYTTGIST SDCSFQDSSK
301: HSSSSHSKDS SSSTEGCQIN SENGSMSELL KALCHSQTRA REAEKAAQRA YSEKEHILSL FFRQASQLFA YKQWLHMLQL ENLCLQLRNK NQSFLNLFPA
401: SLPWDPCRGM LLKKSNSKAR KRRNSNKRCV IAKCVVAAVG LGLAGAGLLL GWTMGWMFPS L

Best Arabidopsis Sequence Match ( AT2G46550.1 )
(BLAST)

001: MAAAEARAVW QRTVNRCFVQ EDAKRAPKLT YCQSSSSSTA SSTKQVEVSG SSPRVSVEPR TQSSCAGFMP LPRNPNFPDL LPHNTRLWSH PHHQFQVNKK
101: QPLEDEVNNQ GVSEKKSELG AGEKQGKSFN SESFQEFIEL METRESYGST GYDESSEKKL SELSFDPSSP WNLLSSEKAA PWWRTTDKDE LASLVAQRSL
201: DYVENCDLPT PQKMKRSYYG SPRGFDSDGL RDYSVSGQTI KGTSKGSSCK NRPEASSESD LSKSELLEAL RRSQTRAREA ENMAKEAYAE KEHLVKILLK
301: QAAELFGYKQ WLQLLQLEAL YLQIKNKEID NKNNDDPGVS IPCWSNGKAR KEGRKRRSKR GKPNGAKYAV GLALGMSLVG AGLLLGWTVG WMQMLSF

Arabidopsis Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9ZPY4]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.