Factsheet for Bra032629.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 4
peroxisome 1
nucleus 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38000	Canola	mitochondrion	90.83	90.29
AT1G01240.3	Thale cress	mitochondrion	68.34	69.79
Bra033275.1-P	Field mustard	mitochondrion	46.45	51.48
Bra039276.1-P	Field mustard	nucleus	32.54	32.45
KRH68927	Soybean	nucleus	38.46	30.52
KRG97204	Soybean	nucleus	38.17	30.28
Bra004527.1-P	Field mustard	nucleus, plastid	33.43	29.05
KRH47890	Soybean	cytosol, mitochondrion	37.57	28.6
Bra039275.1-P	Field mustard	nucleus	14.79	27.93
KRH06447	Soybean	cytosol, mitochondrion	36.69	27.87
VIT_15s0046g00260.t01	Wine grape	mitochondrion, nucleus	38.17	26.99
Zm00001d005653_P001	Maize	nucleus	34.02	24.68
Zm00001d020233_P001	Maize	mitochondrion	33.73	24.46
Os08t0400300-01	Rice	nucleus	34.62	24.32
KXG35486	Sorghum	cytosol, mitochondrion, nucleus, plasma membrane	33.43	24.09
HORVU5Hr1G057510.3	Barley	cytosol, mitochondrion	32.25	23.54
TraesCS5B01G190300.1	Wheat	cytosol, mitochondrion	31.95	23.18
Zm00001d032283_P004	Maize	mitochondrion	32.84	23.17
TraesCS5D01G198100.1	Wheat	cytosol, mitochondrion	31.66	22.86
TraesCS5A01G194900.2	Wheat	cytosol, mitochondrion	32.25	22.8
Os09t0363500-01	Rice	mitochondrion	31.07	22.68
Solyc03g083000.2.1	Tomato	nucleus	26.92	22.41
EES13800	Sorghum	mitochondrion	31.66	22.34
PGSC0003DMT400047670	Potato	nucleus	26.33	21.87
GSMUA_AchrUn_...	Banana	cytosol	7.99	11.49

Protein Annotations

EnsemblPlants:Bra032629.1	EnsemblPlants:Bra032629.1-P	EnsemblPlantsGene:Bra032629	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
ncoils:Coil	PANTHER:PTHR33868	PANTHER:PTHR33868:SF2	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002543101
UniProt:M4EUZ6	MapMan:35.2	:	:	:	:

Description

AT1G01240 (E=6e-102) | unknown protein

Coordinates

chrA09:+:36919452..36920468

Molecular Weight (calculated)

38098.8 Da

IEP (calculated)

7.848

GRAVY (calculated)

-0.649

Length

338 amino acids

Sequence
(BLAST)

001: MGAAEVRALW QRRASRCFLV HEDAAMPPRL ACCCHHHQQQ QHPSSSSGKN SFSSTSFGDS SDFSSDTKWW LKGGSSGFDE EIANSFLQDT KLHQFVDLTG
101: VSKEAKDEEE YSFISKKDTA TTPWWRSATD QDELALLVST RSVDHHIQNC DLPPPQKLHK SIQCTTNGEK GFQTAVIKSP WKQGAWSDRF ESSSNSTDSK
201: NTSPKSSPQS DDLISKAQLL EALRHSQTRA REAEEAAKEA CAEKDRLITV LMRQASQILA YKQWIKLLEM EALYLHMEEV GEQEQIEGMN LKKRKQRGKK
301: KNKKMGEFGR YVMAFALGFS LIGAGLLLGW TVGWLFPF

Best Arabidopsis Sequence Match ( AT1G01240.2 )
(BLAST)

001: MGAAEARALW QRTASRCFVV HEDAKMAPRL ACCQHQQSSS GNTEKNSFSS GSFGDSSDFS CDTKWWLKGS TGFDEEVTNS FLEDTKCKKL HEFVDLIGIR
101: EEEDYSFISK KADATTPWWR STTDKDELAL MVATKSVDHN IQNCDLPPPQ KLHKSIHSSS GEKGFKTAVK SPWKQGVWKD RFERSLSYNG STESKNTSPM
201: SSPRSDDLSK GQLLEALRHS QTRAREAERA AREACAEKDR VITILLKQAS QMLAYKQWLK LLEMEALYLQ MKKEEEQEEQ VKGMNLKKRK QRGEKKKKGE
301: TGRYMMAFAL GFSLIGAGLL LGWTVGWLLP F

Arabidopsis Description

At1g01240/F6F3_11 [Source:UniProtKB/TrEMBL;Acc:Q9LNJ7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.