Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
- peroxisome 1
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY15190 | Canola | mitochondrion | 71.3 | 75.88 |
| CDX90019 | Canola | mitochondrion | 71.6 | 70.75 |
| Bra032629.1-P | Field mustard | mitochondrion | 69.79 | 68.34 |
| CDY38000 | Canola | mitochondrion | 69.18 | 67.35 |
| Bra033275.1-P | Field mustard | mitochondrion | 55.89 | 60.66 |
| AT2G46550.1 | Thale cress | nucleus, plastid | 41.69 | 34.76 |
| KRH68927 | Soybean | nucleus | 41.39 | 32.16 |
| KRG97204 | Soybean | nucleus | 40.79 | 31.69 |
| VIT_15s0046g00260.t01 | Wine grape | mitochondrion, nucleus | 40.79 | 28.24 |
| KRH47890 | Soybean | cytosol, mitochondrion | 37.16 | 27.7 |
| KRH06447 | Soybean | cytosol, mitochondrion | 37.16 | 27.64 |
| Zm00001d020233_P001 | Maize | mitochondrion | 36.56 | 25.97 |
| Zm00001d005653_P001 | Maize | nucleus | 36.56 | 25.97 |
| KXG35486 | Sorghum | cytosol, mitochondrion, nucleus, plasma membrane | 36.56 | 25.8 |
| Os09t0363500-01 | Rice | mitochondrion | 34.74 | 24.84 |
| Solyc03g083000.2.1 | Tomato | nucleus | 29.91 | 24.38 |
| Os08t0400300-01 | Rice | nucleus | 35.35 | 24.32 |
| Zm00001d032283_P004 | Maize | mitochondrion | 35.05 | 24.22 |
| HORVU5Hr1G057510.3 | Barley | cytosol, mitochondrion | 33.84 | 24.19 |
| TraesCS5B01G190300.1 | Wheat | cytosol, mitochondrion | 33.84 | 24.03 |
| PGSC0003DMT400047670 | Potato | nucleus | 29.31 | 23.83 |
| TraesCS5D01G198100.1 | Wheat | cytosol, mitochondrion | 33.53 | 23.72 |
| TraesCS5A01G194900.2 | Wheat | cytosol, mitochondrion | 33.84 | 23.43 |
| EES13800 | Sorghum | mitochondrion | 33.53 | 23.17 |
| GSMUA_AchrUn_... | Banana | cytosol | 8.46 | 11.91 |
Protein Annotations
| MapMan:35.2 | EntrezGene:839274 | ProteinID:AAF97320.1 | ProteinID:AEE27258.1 | ProteinID:AEE27259.1 | ProteinID:AEE27260.1 |
| EMBL:AF428444 | ProteinID:ANM58163.1 | ProteinID:ANM58164.1 | ArrayExpress:AT1G01240 | EnsemblPlantsGene:AT1G01240 | RefSeq:AT1G01240 |
| TAIR:AT1G01240 | RefSeq:AT1G01240-TAIR-G | EnsemblPlants:AT1G01240.3 | TAIR:AT1G01240.3 | EMBL:AY056171 | EMBL:AY091196 |
| Unigene:At.26834 | ncoils:Coil | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | RefSeq:NP_001320619.1 |
| RefSeq:NP_001320620.1 | RefSeq:NP_563623.1 | RefSeq:NP_973735.1 | RefSeq:NP_973736.1 | PO:PO:0000013 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020030 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR33868 | PANTHER:PTHR33868:SF2 | UniProt:Q9LNJ7 |
| TMHMM:TMhelix | UniParc:UPI00000AB741 | SEG:seg | : | : | : |
Description
At1g01240/F6F3_11 [Source:UniProtKB/TrEMBL;Acc:Q9LNJ7]
Coordinates
chr1:+:99866..101987
Molecular Weight (calculated)
37513.5 Da
IEP (calculated)
9.016
GRAVY (calculated)
-0.713
Length
331 amino acids
Sequence
(BLAST)
(BLAST)
001: MGAAEARALW QRTASRCFVV HEDAKMAPRL ACCQHQQSSS GNTEKNSFSS GSFGDSSDFS CDTKWWLKGS TGFDEEVTNS FLEDTKCKKL HEFVDLIGIR
101: EEEDYSFISK KADATTPWWR STTDKDELAL MVATKSVDHN IQNCDLPPPQ KLHKSIHSSS GEKGFKTAVK SPWKQGVWKD RFERSLSYNG STESKNTSPM
201: SSPRSDDLSK GQLLEALRHS QTRAREAERA AREACAEKDR VITILLKQAS QMLAYKQWLK LLEMEALYLQ MKKEEEQEEQ VKGMNLKKRK QRGEKKKKGE
301: TGRYMMAFAL GFSLIGAGLL LGWTVGWLLP F
101: EEEDYSFISK KADATTPWWR STTDKDELAL MVATKSVDHN IQNCDLPPPQ KLHKSIHSSS GEKGFKTAVK SPWKQGVWKD RFERSLSYNG STESKNTSPM
201: SSPRSDDLSK GQLLEALRHS QTRAREAERA AREACAEKDR VITILLKQAS QMLAYKQWLK LLEMEALYLQ MKKEEEQEEQ VKGMNLKKRK QRGEKKKKGE
301: TGRYMMAFAL GFSLIGAGLL LGWTVGWLLP F
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.