Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX99425 | Canola | nucleus | 98.41 | 98.41 |
| CDX85174 | Canola | nucleus | 57.14 | 17.65 |
| CDY61731 | Canola | nucleus | 55.56 | 11.18 |
| CDY27317 | Canola | nucleus | 57.14 | 11.08 |
| CDX80028 | Canola | nucleus, plastid | 58.73 | 9.51 |
| CDY56879 | Canola | nucleus | 58.73 | 9.49 |
| CDY15190 | Canola | mitochondrion | 44.44 | 9.0 |
| CDX90019 | Canola | mitochondrion | 47.62 | 8.96 |
| CDY38000 | Canola | mitochondrion | 46.03 | 8.53 |
| Solyc03g083000.2.1 | Tomato | nucleus | 46.03 | 7.14 |
| PGSC0003DMT400047670 | Potato | nucleus | 46.03 | 7.13 |
| KRH68927 | Soybean | nucleus | 46.03 | 6.81 |
| KRG97204 | Soybean | nucleus | 44.44 | 6.57 |
| VIT_15s0046g00260.t01 | Wine grape | mitochondrion, nucleus | 44.44 | 5.86 |
| KRH47890 | Soybean | cytosol, mitochondrion | 41.27 | 5.86 |
| KRH06447 | Soybean | cytosol, mitochondrion | 39.68 | 5.62 |
| HORVU5Hr1G057510.3 | Barley | cytosol, mitochondrion | 41.27 | 5.62 |
| TraesCS5B01G190300.1 | Wheat | cytosol, mitochondrion | 41.27 | 5.58 |
| TraesCS5D01G198100.1 | Wheat | cytosol, mitochondrion | 41.27 | 5.56 |
| TraesCS5A01G194900.2 | Wheat | cytosol, mitochondrion | 41.27 | 5.44 |
| Os09t0363500-01 | Rice | mitochondrion | 38.1 | 5.18 |
| Zm00001d005653_P001 | Maize | nucleus | 38.1 | 5.15 |
| KXG35486 | Sorghum | cytosol, mitochondrion, nucleus, plasma membrane | 36.51 | 4.9 |
| Zm00001d032283_P004 | Maize | mitochondrion | 36.51 | 4.8 |
| Zm00001d020233_P001 | Maize | mitochondrion | 34.92 | 4.72 |
| EES13800 | Sorghum | mitochondrion | 34.92 | 4.59 |
| Os08t0400300-01 | Rice | nucleus | 33.33 | 4.37 |
| GSMUA_AchrUn_... | Banana | cytosol | 9.52 | 2.55 |
Protein Annotations
| EnsemblPlants:CDY68438 | EnsemblPlantsGene:GSBRNA2T00074222001 | ncoils:Coil | PANTHER:PTHR33868 | ProteinID:CDY68438 | ProteinID:CDY68438.1 |
| SEG:seg | UniParc:UPI0004EE752C | UniProt:A0A078JLQ3 | MapMan:35.2 | : | : |
Description
BnaCnng59000DBnaCnng59000D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JLQ3]
Coordinates
chrLK037342:+:456..647
Molecular Weight (calculated)
7198.3 Da
IEP (calculated)
8.238
GRAVY (calculated)
-1.340
Length
63 amino acids
Sequence
(BLAST)
(BLAST)
1: MKRSYYHGSS PHEHWPSSCK KRTEEASSES DLSKSELLEA LRRSQTRARE AENMAKEACA EKA
001: METRESYGST GYDESSEKKL SELSFDPSSP WNLLSSEKAA PWWRTTDKDE LASLVAQRSL DYVENCDLPT PQKMKRSYYG SPRGFDSDGL RDYSVSGQTI
101: KGTSKGSSCK NRPEASSESD LSKSELLEAL RRSQTRAREA ENMAKEAYAE KEHLVKILLK QAAELFGYKQ WLQLLQLEAL YLQIKNKEID NKNNDDPGVS
201: IPCWSNGKAR KEGRKRRSKR GKPNGAKYAV GLALGMSLVG AGLLLGWTVG WMQMLSF
101: KGTSKGSSCK NRPEASSESD LSKSELLEAL RRSQTRAREA ENMAKEAYAE KEHLVKILLK QAAELFGYKQ WLQLLQLEAL YLQIKNKEID NKNNDDPGVS
201: IPCWSNGKAR KEGRKRRSKR GKPNGAKYAV GLALGMSLVG AGLLLGWTVG WMQMLSF
Arabidopsis Description
Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9ZPY4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.