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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • vacuole 1
  • cytosol 4
  • plasma membrane 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane, vacuole
BaCelLo:nucleus
EpiLoc:vacuole
MultiLoc:cytosol
Plant-mPloc:cytosol, plasma membrane
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400046278 Potato cytosol 63.72 93.51
PGSC0003DMT400054299 Potato cytosol 92.92 92.92
Zm00001d008278_P001 Maize cytosol 96.46 85.83
TraesCS1A01G308800.1 Wheat cytosol 96.46 83.21
PGSC0003DMT400014123 Potato mitochondrion 89.38 82.79
KRH18664 Soybean cytosol 96.46 77.86
Bra004166.1-P Field mustard cytosol 100.0 75.84
CDY27651 Canola cytosol 100.0 75.33
Zm00001d047597_P001 Maize cytosol 96.46 74.15
GSMUA_Achr2P01120_001 Banana cytosol 97.35 73.83
GSMUA_Achr3P25040_001 Banana cytosol 97.35 73.83
Os05t0491100-01 Rice cytosol, extracellular 97.35 73.83
Bra012037.1-P Field mustard cytosol 96.46 73.15
Bra019453.1-P Field mustard cytosol 96.46 73.15
GSMUA_Achr10P... Banana cytosol 96.46 73.15
GSMUA_Achr10P... Banana cytosol, plasma membrane 96.46 73.15
GSMUA_Achr3P09330_001 Banana cytosol 96.46 73.15
GSMUA_Achr5P07820_001 Banana cytosol 96.46 73.15
GSMUA_Achr6P23670_001 Banana cytosol 96.46 73.15
KRG94975 Soybean nucleus 96.46 73.15
Os01t0267900-01 Rice cytosol 96.46 73.15
Os01t0279300-01 Rice cytosol, plasma membrane, plastid 96.46 73.15
Os03t0319300-01 Rice cytosol, extracellular, nucleus 96.46 73.15
Os07t0687200-02 Rice cytosol 96.46 73.15
Solyc10g081170.1.1 Tomato extracellular 96.46 73.15
VIT_08s0040g00470.t01 Wine grape cytosol 96.46 73.15
Zm00001d038545_P001 Maize cytosol, mitochondrion 96.46 73.15
Bra000214.1-P Field mustard cytosol 95.58 72.48
Bra002368.1-P Field mustard cytosol 95.58 72.48
Bra003251.1-P Field mustard cytosol 95.58 72.48
Bra006595.1-P Field mustard cytosol 95.58 72.48
Bra014671.1-P Field mustard cytosol 95.58 72.48
Bra020155.1-P Field mustard cytosol 95.58 72.48
GSMUA_Achr6P15990_001 Banana cytosol 95.58 72.48
GSMUA_Achr9P17280_001 Banana cytosol 95.58 72.48
PGSC0003DMT400018569 Potato cytosol 95.58 72.48
PGSC0003DMT400058435 Potato cytosol 95.58 72.48
PGSC0003DMT400070437 Potato cytosol 95.58 72.48
Solyc01g008950.2.1 Tomato nucleus 95.58 72.48
Solyc10g077010.1.1 Tomato cytosol 95.58 72.48
Solyc11g072240.1.1 Tomato cytosol 95.58 72.48
Solyc12g099990.1.1 Tomato nucleus 95.58 72.48
Bra007269.1-P Field mustard cytosol 94.69 71.81
VIT_06s0009g01910.t01 Wine grape cytosol 96.46 71.24
Bra034981.1-P Field mustard cytosol 89.38 69.66
TraesCS3A01G191900.1 Wheat cytosol 96.46 68.55
TraesCS3D01G194500.2 Wheat cytosol 96.46 68.55
TraesCS3A01G184500.1 Wheat cytosol 95.58 65.85
GSMUA_Achr5P27590_001 Banana cytosol 67.26 65.52
TraesCS3D01G188600.1 Wheat cytosol 96.46 65.27
Zm00001d038543_P004 Maize plastid 96.46 64.5
AT5G37780.3 Thale cress cytosol 99.11 64.0
TraesCS3B01G219900.1 Wheat cytosol 96.46 62.64
TraesCS2B01G113800.2 Wheat cytosol 96.46 62.29
PGSC0003DMT400097662 Potato cytosol, mitochondrion 94.69 61.85
Bra034317.1-P Field mustard cytosol 96.46 60.89
GSMUA_Achr11P... Banana cytosol 54.87 60.78
TraesCS3A01G335000.1 Wheat cytosol 94.69 58.79
TraesCS3D01G328300.1 Wheat cytosol 94.69 58.79
KRG89812 Soybean cytosol, mitochondrion 85.84 58.79
HORVU3Hr1G079210.4 Barley cytosol 94.69 58.15
TraesCS3B01G365900.1 Wheat cytosol 92.92 57.38
Zm00001d028948_P001 Maize cytosol 96.46 55.33
Bra001892.1-P Field mustard cytosol 75.22 55.19
HORVU3Hr1G038010.1 Barley cytosol, plastid 96.46 54.77
Bra023786.1-P Field mustard cytosol 75.22 54.49
Bra033898.1-P Field mustard cytosol 73.45 53.55
Bra039723.1-P Field mustard cytosol 69.03 50.98
HORVU2Hr1G016740.4 Barley cytosol 96.46 50.7
Zm00001d052415_P001 Maize cytosol 70.8 50.63
EES01631 Sorghum cytosol 82.3 50.54
Os01t0810300-01 Rice plasma membrane 83.19 50.27
Zm00001d043144_P001 Maize plasma membrane 79.65 49.18
GSMUA_Achr10P... Banana cytosol 78.76 47.09
Os12t0603800-00 Rice cytosol 69.03 46.99
GSMUA_Achr10P... Banana cytosol 77.88 46.81
Zm00001d041430_P001 Maize cytosol 69.91 46.75
TraesCS5D01G068100.1 Wheat cytosol 67.26 46.63
EES16322 Sorghum cytosol 72.57 46.59
HORVU5Hr1G014070.2 Barley cytosol 68.14 46.39
TraesCS5A01G057200.1 Wheat cytosol 66.37 46.01
TraesCS5A01G057100.1 Wheat cytosol 66.37 45.45
HORVU5Hr1G044710.4 Barley cytosol 71.68 45.0
TraesCS5A01G139700.1 Wheat cytosol 71.68 45.0
TraesCS5D01G153400.1 Wheat cytosol 71.68 45.0
TraesCS5D01G068000.1 Wheat cytosol 66.37 44.64
EES09201 Sorghum cytosol 70.8 44.44
TraesCS5B01G137100.1 Wheat cytosol 70.8 44.44
TraesCS5B01G059900.1 Wheat cytosol 65.49 44.05
Zm00001d005003_P002 Maize cytosol 67.26 42.22
HORVU4Hr1G026290.3 Barley cytosol, plastid 69.91 35.75
Zm00001d010649_P001 Maize extracellular 44.25 35.21
HORVU5Hr1G014060.1 Barley cytosol, plastid 65.49 34.58
Bra026976.1-P Field mustard cytosol 44.25 33.78
Os05t0491000-01 Rice cytosol 46.02 33.55
Bra019756.1-P Field mustard cytosol 43.36 33.11
TraesCS4B01G131100.1 Wheat cytosol 64.6 31.6
HORVU0Hr1G001280.1 Barley cytosol 41.59 31.13
TraesCS4D01G126100.1 Wheat cytosol 66.37 31.12
TraesCS1A01G308700.1 Wheat cytosol 41.59 30.92
TraesCS1B01G319300.1 Wheat cytosol 40.71 30.67
TraesCS1D01G308000.1 Wheat cytosol 40.71 30.67
Bra021379.1-P Field mustard cytosol 45.13 30.18
Bra025896.1-P Field mustard cytosol 40.71 29.3
Bra040770.1-P Field mustard cytosol 42.48 28.92
OQU78227 Sorghum cytosol 45.13 28.49
Bra017355.1-P Field mustard cytosol 39.82 27.95
Bra025149.1-P Field mustard cytosol 39.82 27.78
GSMUA_Achr8P05790_001 Banana cytosol 35.4 16.33
Protein Annotations
Gene3D:1.10.238.10MapMan:35.1EnsemblPlantsGene:Bra025438EnsemblPlants:Bra025438.1EnsemblPlants:Bra025438.1-PInterPro:EF-hand-dom_pair
InterPro:EF_Hand_1_Ca_BSInterPro:EF_hand_domGO:GO:0003674GO:GO:0005488GO:GO:0005509GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0008150GO:GO:0009605GO:GO:0009612
GO:GO:0009628InterPro:IPR002048UniProt:M4E9I2PFAM:PF13499PFAM:PF13833ScanProsite:PS00018
PFscan:PS50222PANTHER:PTHR23050PANTHER:PTHR23050:SF250SMART:SM00054SUPFAM:SSF47473UniParc:UPI0002543880
Description
AT5G37780 (E=3e-060) CAM1, TCH1, ACAM-1 | CAM1 (CALMODULIN 1); calcium ion binding
Coordinates
chrA04:-:8731002..8731343
Molecular Weight (calculated)
12883.1 Da
IEP (calculated)
3.945
GRAVY (calculated)
-0.681
Length
113 amino acids
Sequence
(BLAST)
001: MRSLGQNPTE AELQDMINEV DADGNGTIDF PEFLNLMAKK MKDTDSEEEL KEAFRVFDKD QNGFISAAEL RHVMTNLGEK LTDEEVEEMV READVDGDGQ
101: INYEEFVKIM MAK
Best Arabidopsis Sequence Match ( AT1G66410.4 )
(BLAST)
001: MRSLGQNPTE AELQDMINEV DADGNGTIDF PEFLNLMAKK MKDTDSEEEL KEAFRVFDKD QNGFISAAEL RHVMTNLGEK LTDEEVEEMI READVDGDGQ
101: INYEEFVKIM MAK
Arabidopsis Description
CAM4Calmodulin 4 [Source:UniProtKB/TrEMBL;Acc:F4IEU4]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.