Factsheet for Bra025896.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26151	Canola	cytosol	100.0	100.0
AT1G18530.1	Thale cress	cytosol	91.08	91.08
Bra017355.1-P	Field mustard	cytosol	75.8	73.91
Bra025149.1-P	Field mustard	cytosol	75.16	72.84
VIT_17s0000g04460.t01	Wine grape	cytosol	73.25	71.88
KRH56721	Soybean	cytosol	73.25	71.43
KRH62961	Soybean	cytosol	71.97	70.62
PGSC0003DMT400063261	Potato	cytosol	70.7	68.94
GSMUA_Achr9P21860_001	Banana	cytosol, mitochondrion	71.34	68.71
GSMUA_Achr1P25220_001	Banana	cytosol	69.43	66.87
KRH54782	Soybean	cytosol	66.88	65.62
GSMUA_Achr8P29750_001	Banana	cytosol, mitochondrion	68.15	65.24
Solyc03g114420.1.1	Tomato	cytosol	70.7	64.91
Zm00001d053188_P001	Maize	cytosol	40.76	58.72
Os05t0577500-01	Rice	cytosol, mitochondrion	64.33	58.38
Zm00001d039110_P001	Maize	cytosol	61.15	55.81
TraesCS1A01G416100.1	Wheat	cytosol	60.51	55.23
TraesCS1B01G446400.1	Wheat	plastid	60.51	54.29
EES19997	Sorghum	plastid	61.78	52.15
Bra021379.1-P	Field mustard	cytosol	50.32	46.75
Bra040770.1-P	Field mustard	cytosol	47.13	44.58
EES03239	Sorghum	plastid	64.33	42.8
Zm00001d044411_P001	Maize	plastid	63.06	42.31
Bra025438.1-P	Field mustard	cytosol	29.3	40.71
HORVU3Hr1G052770.1	Barley	cytosol	62.42	39.68
Bra004166.1-P	Field mustard	cytosol	36.94	38.93
Os01t0604500-01	Rice	cytosol	61.15	38.55
Bra000214.1-P	Field mustard	cytosol	36.31	38.26
Bra002368.1-P	Field mustard	cytosol	36.31	38.26
Bra003251.1-P	Field mustard	cytosol	36.31	38.26
Bra006595.1-P	Field mustard	cytosol	36.31	38.26
Bra014671.1-P	Field mustard	cytosol	36.31	38.26
Bra020155.1-P	Field mustard	cytosol	36.31	38.26
TraesCS3A01G216300.1	Wheat	cytosol	61.78	38.04
TraesCS3B01G246100.1	Wheat	cytosol	61.78	38.04
Bra034981.1-P	Field mustard	cytosol	35.03	37.93
TraesCS3D01G217900.1	Wheat	cytosol	61.15	37.65
Bra019453.1-P	Field mustard	cytosol	35.67	37.58
Bra012037.1-P	Field mustard	cytosol	35.67	37.58
Bra007269.1-P	Field mustard	cytosol	35.67	37.58
Bra001892.1-P	Field mustard	cytosol	36.31	37.01
Bra023786.1-P	Field mustard	cytosol	35.67	35.9
Bra033898.1-P	Field mustard	cytosol	35.03	35.48
Bra039723.1-P	Field mustard	cytosol	32.48	33.33
Bra034317.1-P	Field mustard	cytosol	36.31	31.84
Bra026976.1-P	Field mustard	cytosol	27.39	29.05
Bra019756.1-P	Field mustard	cytosol	26.11	27.7

Protein Annotations

EnsemblPlants:Bra025896.1	EnsemblPlants:Bra025896.1-P	EnsemblPlantsGene:Bra025896	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR44256
PANTHER:PTHR44256:SF5	PFAM:PF13499	PFscan:PS50222	ScanProsite:PS00018	SEG:seg	SMART:SM00054
SUPFAM:SSF47473	UniParc:UPI000253F44D	UniProt:M4EAT7	MapMan:35.1	:	:

Description

AT1G18530 (E=2e-067) | calmodulin, putative

Coordinates

chrA06:+:7113888..7114361

Molecular Weight (calculated)

17101.4 Da

IEP (calculated)

3.921

GRAVY (calculated)

0.030

Length

157 amino acids

Sequence
(BLAST)

001: MEGQLRQLQD IFNRFDMDGD GSLTILELAA LLRSLGLKPT GDQIHLLLAS MDANGNGFVE FDELVGAILP DLNEEVLINS EQLMNIFKSF DRDGNGFISA
101: AELAGAMAKM GQPLTYRELT EMIQEADTNG DGVISFGEFA SIMAKSAVEY FGLKINS

Best Arabidopsis Sequence Match ( AT1G18530.1 )
(BLAST)

001: MEDQIRQLKD IFDRFDMDAD GSLTILELAA LLRSLGLKPS GDQIHVLLAS MDSNGNGFVE FDELVGTILP DLNEEVLINS EQLLEIFKSF DRDGNGFISA
101: AELAGAMAKM GQPLTYKELT EMIKEADTNG DGVISFGEFA SIMAKSAVDY FGLKINS

Arabidopsis Description

CML15Probable calcium-binding protein CML15 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ75]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.