CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 5
extracellular 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d053188_P001	Maize	cytosol	45.76	99.08
Zm00001d044411_P001	Maize	plastid	88.14	88.89
Os01t0604500-01	Rice	cytosol	74.15	70.28
HORVU3Hr1G052770.1	Barley	cytosol	72.03	68.83
GSMUA_Achr8P29750_001	Banana	cytosol, mitochondrion	47.46	68.29
TraesCS3B01G246100.1	Wheat	cytosol	71.19	65.88
GSMUA_Achr9P21860_001	Banana	cytosol, mitochondrion	44.92	65.03
EES19997	Sorghum	plastid	50.85	64.52
GSMUA_Achr1P25220_001	Banana	cytosol	44.49	64.42
Bra025896.1-P	Field mustard	cytosol	42.8	64.33
CDY26151	Canola	cytosol	42.8	64.33
TraesCS3D01G217900.1	Wheat	cytosol	69.49	64.31
CDX81878	Canola	cytosol	42.37	64.1
CDY21702	Canola	cytosol	42.37	64.1
AT1G18530.1	Thale cress	cytosol	42.37	63.69
CDY19221	Canola	cytosol	42.37	63.69
TraesCS3A01G216300.1	Wheat	cytosol	67.37	62.35
VIT_17s0000g04460.t01	Wine grape	cytosol	41.53	61.25
CDY59874	Canola	cytosol	41.53	60.87
CDY04172	Canola	cytosol	41.53	60.87
Bra017355.1-P	Field mustard	cytosol	41.53	60.87
KRH56721	Soybean	cytosol	41.53	60.87
PGSC0003DMT400063261	Potato	cytosol	41.53	60.87
PGSC0003DMT400041342	Potato	cytosol, mitochondrion	41.53	60.87
VIT_01s0011g02470.t01	Wine grape	cytosol	41.53	60.49
CDY51605	Canola	cytosol	41.53	60.49
CDY48076	Canola	cytosol	41.53	60.49
Bra025149.1-P	Field mustard	cytosol	41.53	60.49
Solyc01g010020.2.1	Tomato	cytosol	41.1	60.25
KRH62961	Soybean	cytosol	40.68	60.0
AT3G25600.1	Thale cress	cytosol	40.68	59.63
KRH07628	Soybean	cytosol	39.41	58.12
Solyc03g114420.1.1	Tomato	cytosol	41.95	57.89
KRH54782	Soybean	cytosol	38.56	56.88
PGSC0003DMT400019291	Potato	cytosol	25.42	51.72
EER90981	Sorghum	cytosol	25.42	40.27
KXG37587	Sorghum	cytosol	25.42	38.96
OQU84270	Sorghum	cytosol, plastid	35.17	37.9
EES16322	Sorghum	cytosol	26.69	35.8
EES09201	Sorghum	cytosol	25.85	33.89
EES01631	Sorghum	cytosol	25.0	32.07
OQU79799	Sorghum	cytosol	16.95	27.03
KXG36700	Sorghum	cytosol	19.07	26.16
OQU78227	Sorghum	cytosol	17.8	23.46
KXG37588	Sorghum	mitochondrion, nucleus	0.42	0.73

Protein Annotations

Gene3D:1.10.238.10	MapMan:35.1	EntrezGene:8082215	UniProt:C5XQA7	EnsemblPlants:EES03239	ProteinID:EES03239
ProteinID:EES03239.1	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:IPR002048	PFAM:PF13499	ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR44256
PANTHER:PTHR44256:SF4	SMART:SM00054	EnsemblPlantsGene:SORBI_3003G212000	SUPFAM:SSF47473	UniParc:UPI0001A84F2C	RefSeq:XP_002458119.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:54662898..54663608

Molecular Weight (calculated)

24445.1 Da

IEP (calculated)

4.785

GRAVY (calculated)

-0.082

Length

236 amino acids

Sequence
(BLAST)

001: MQAQCPRPED RVPGGSATAA APPVQPATAT MSTTNARTKR SASMPLHGTG ASASAGAGKG RDPSPTPGPG GRARLRGEQL RQLQELFLRF DLDGDGSLTK
101: LELAALLRSL GLRPAAGDEI HALIAAMDAD GNGTVEFDEL ASSLAPLLLG PCRPAVAVDH AQLAEAFRAF DRDGNGFISA AELARSMALM GHPICYAELT
201: DMMKEADTDG DGVISFQEFT AIMAKSAVDF LGLAAL

Best Arabidopsis Sequence Match ( AT1G18530.1 )
(BLAST)

001: MEDQIRQLKD IFDRFDMDAD GSLTILELAA LLRSLGLKPS GDQIHVLLAS MDSNGNGFVE FDELVGTILP DLNEEVLINS EQLLEIFKSF DRDGNGFISA
101: AELAGAMAKM GQPLTYKELT EMIKEADTNG DGVISFGEFA SIMAKSAVDY FGLKINS

Arabidopsis Description

CML15Probable calcium-binding protein CML15 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ75]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.