Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400041342 | Potato | cytosol, mitochondrion | 96.27 | 96.27 |
| VIT_01s0011g02470.t01 | Wine grape | cytosol | 77.64 | 77.16 |
| AT3G25600.1 | Thale cress | cytosol | 76.4 | 76.4 |
| Bra017355.1-P | Field mustard | cytosol | 75.78 | 75.78 |
| CDY04172 | Canola | cytosol | 75.78 | 75.78 |
| Bra025149.1-P | Field mustard | cytosol | 75.78 | 75.31 |
| CDY48076 | Canola | cytosol | 75.78 | 75.31 |
| CDY51605 | Canola | cytosol | 75.78 | 75.31 |
| CDY59874 | Canola | cytosol | 75.16 | 75.16 |
| KRH07628 | Soybean | cytosol | 72.05 | 72.5 |
| Solyc03g114420.1.1 | Tomato | cytosol | 70.81 | 66.67 |
| GSMUA_Achr1P25220_001 | Banana | cytosol | 67.08 | 66.26 |
| GSMUA_Achr9P21860_001 | Banana | cytosol, mitochondrion | 66.46 | 65.64 |
| GSMUA_Achr8P29750_001 | Banana | cytosol, mitochondrion | 65.84 | 64.63 |
| Os05t0577500-01 | Rice | cytosol, mitochondrion | 62.73 | 58.38 |
| Zm00001d053188_P001 | Maize | cytosol | 39.13 | 57.8 |
| Zm00001d039110_P001 | Maize | cytosol | 61.49 | 57.56 |
| TraesCS1A01G416100.1 | Wheat | cytosol | 60.87 | 56.98 |
| TraesCS1B01G446400.1 | Wheat | plastid | 60.87 | 56.0 |
| EES19997 | Sorghum | plastid | 60.87 | 52.69 |
| Solyc03g097100.1.1 | Tomato | cytosol | 51.55 | 50.92 |
| Zm00001d044411_P001 | Maize | plastid | 60.87 | 41.88 |
| EES03239 | Sorghum | plastid | 60.25 | 41.1 |
| HORVU3Hr1G052770.1 | Barley | cytosol | 60.25 | 39.27 |
| TraesCS3D01G217900.1 | Wheat | cytosol | 60.87 | 38.43 |
| TraesCS3A01G216300.1 | Wheat | cytosol | 60.87 | 38.43 |
| Solyc10g081170.1.1 | Tomato | extracellular | 35.4 | 38.26 |
| Solyc12g099990.1.1 | Tomato | nucleus | 35.4 | 38.26 |
| Solyc11g072240.1.1 | Tomato | cytosol | 35.4 | 38.26 |
| Solyc10g077010.1.1 | Tomato | cytosol | 35.4 | 38.26 |
| Solyc06g053930.2.1 | Tomato | cytosol | 35.4 | 38.26 |
| Solyc01g008950.2.1 | Tomato | nucleus | 35.4 | 38.26 |
| Os01t0604500-01 | Rice | cytosol | 59.01 | 38.15 |
| TraesCS3B01G246100.1 | Wheat | cytosol | 60.25 | 38.04 |
| Solyc03g005240.1.1 | Tomato | cytosol | 34.78 | 36.6 |
| Solyc03g098050.2.1 | Tomato | nucleus | 32.92 | 35.57 |
| Solyc01g105630.2.1 | Tomato | cytosol | 30.43 | 33.33 |
| Solyc03g083520.2.1 | Tomato | cytosol, nucleus | 26.09 | 28.0 |
| Solyc02g090810.2.1 | Tomato | cytosol, mitochondrion | 29.19 | 27.98 |
| Solyc04g026350.2.1 | Tomato | cytosol | 27.33 | 25.43 |
| Solyc11g072270.1.1 | Tomato | cytosol | 24.22 | 25.0 |
Protein Annotations
| EnsemblPlants:Solyc01g010020.2.1 | EnsemblPlantsGene:Solyc01g010020.2 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR44256 | PANTHER:PTHR44256:SF6 |
| PFAM:PF13499 | PFscan:PS50222 | ScanProsite:PS00018 | SEG:seg | SMART:SM00054 | SUPFAM:SSF47473 |
| UniParc:UPI00027618FC | UniProt:K4ATJ7 | MapMan:35.1 | : | : | : |
Description
Probable calcium-binding protein CML16 [Source:Projected from Arabidopsis thaliana (AT3G25600) UniProtKB/Swiss-Prot;Acc:Q9LI84]
Coordinates
chr1:-:4657174..4658216
Molecular Weight (calculated)
17676.1 Da
IEP (calculated)
4.011
GRAVY (calculated)
-0.117
Length
161 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSIQSDEQL KQLKEIFGRF DLDHDGSLTQ LELAALLRAL GLKPTGDQIH TLLANMDNNG NGFIEFDELV NAIMPDINAE ILINQEQLME VFRSFDRDGN
101: GYITAAELAG SMAKMGRPLT YKELSDMMQE ADTNGDGVIS FNEFANIMGK SAADILGLTI S
101: GYITAAELAG SMAKMGRPLT YKELSDMMQE ADTNGDGVIS FNEFANIMGK SAADILGLTI S
001: MASTKPTDQI KQLKDIFARF DMDKDGSLTQ LELAALLRSL GIKPRGDQIS LLLNQIDRNG NGSVEFDELV VAILPDINEE VLINQEQLME VFRSFDRDGN
101: GSITAAELAG SMAKMGHPLT YRELTEMMTE ADSNGDGVIS FNEFSHIMAK SAADFLGLTA S
101: GSITAAELAG SMAKMGHPLT YRELTEMMTE ADSNGDGVIS FNEFSHIMAK SAADFLGLTA S
Arabidopsis Description
CML16Probable calcium-binding protein CML16 [Source:UniProtKB/Swiss-Prot;Acc:Q9LI84]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.