Factsheet for GSMUA_Achr1P25220_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P21860_001	Banana	cytosol, mitochondrion	85.28	85.28
GSMUA_Achr8P29750_001	Banana	cytosol, mitochondrion	84.05	83.54
VIT_17s0000g04460.t01	Wine grape	cytosol	69.94	71.25
KRH07628	Soybean	cytosol	69.33	70.62
Os05t0577500-01	Rice	cytosol, mitochondrion	74.23	69.94
CDY48076	Canola	cytosol	69.33	69.75
VIT_01s0011g02470.t01	Wine grape	cytosol	69.33	69.75
CDY51605	Canola	cytosol	69.33	69.75
Bra025149.1-P	Field mustard	cytosol	69.33	69.75
PGSC0003DMT400063261	Potato	cytosol	68.71	69.57
CDY26151	Canola	cytosol	66.87	69.43
Bra025896.1-P	Field mustard	cytosol	66.87	69.43
CDY21702	Canola	cytosol	66.26	69.23
CDY04172	Canola	cytosol	68.1	68.94
CDY59874	Canola	cytosol	68.1	68.94
KRH56721	Soybean	cytosol	68.1	68.94
Bra017355.1-P	Field mustard	cytosol	68.1	68.94
AT1G18530.1	Thale cress	cytosol	66.26	68.79
CDX81878	Canola	cytosol	65.64	68.59
AT3G25600.1	Thale cress	cytosol	67.48	68.32
CDY19221	Canola	cytosol	65.64	68.15
PGSC0003DMT400041342	Potato	cytosol, mitochondrion	66.87	67.7
Solyc03g114420.1.1	Tomato	cytosol	70.55	67.25
Solyc01g010020.2.1	Tomato	cytosol	66.26	67.08
Zm00001d039110_P001	Maize	cytosol	70.55	66.86
TraesCS1A01G416100.1	Wheat	cytosol	69.94	66.28
KRH62961	Soybean	cytosol	65.03	66.25
TraesCS1B01G446400.1	Wheat	plastid	69.94	65.14
Zm00001d053188_P001	Maize	cytosol	42.33	63.3
KRH54782	Soybean	cytosol	61.96	63.12
EES19997	Sorghum	plastid	70.55	61.83
PGSC0003DMT400019291	Potato	cytosol	41.72	58.62
EES03239	Sorghum	plastid	64.42	44.49
Zm00001d044411_P001	Maize	plastid	63.19	44.02
Os01t0604500-01	Rice	cytosol	65.03	42.57
HORVU3Hr1G052770.1	Barley	cytosol	64.42	42.51
GSMUA_Achr6P23670_001	Banana	cytosol	37.42	40.94
TraesCS3B01G246100.1	Wheat	cytosol	63.19	40.39
TraesCS3A01G216300.1	Wheat	cytosol	63.19	40.39
GSMUA_Achr3P09330_001	Banana	cytosol	36.81	40.27
GSMUA_Achr10P...	Banana	cytosol, plasma membrane	36.81	40.27
GSMUA_Achr3P25040_001	Banana	cytosol	36.81	40.27
GSMUA_Achr5P07820_001	Banana	cytosol	36.81	40.27
GSMUA_Achr6P15990_001	Banana	cytosol	36.81	40.27
GSMUA_Achr11P...	Banana	cytosol	25.15	40.2
TraesCS3D01G217900.1	Wheat	cytosol	62.58	40.0
GSMUA_Achr9P17280_001	Banana	cytosol	36.2	39.6
GSMUA_Achr2P01120_001	Banana	cytosol	36.2	39.6
GSMUA_Achr1P04700_001	Banana	cytosol	35.58	39.19
GSMUA_Achr5P09010_001	Banana	cytosol	35.58	39.19
GSMUA_Achr10P...	Banana	cytosol	35.58	38.93
GSMUA_Achr1P27230_001	Banana	cytosol	34.97	38.51
GSMUA_Achr6P24410_001	Banana	cytosol	34.97	38.26
GSMUA_Achr7P07720_001	Banana	cytosol	34.36	37.84
GSMUA_AchrUn_...	Banana	cytosol	33.74	37.41
GSMUA_Achr7P01390_001	Banana	cytosol	33.74	37.16
GSMUA_Achr2P12680_001	Banana	cytosol	33.13	36.49
GSMUA_Achr4P22570_001	Banana	cytosol	33.13	36.49
GSMUA_Achr5P27590_001	Banana	cytosol	25.77	36.21
GSMUA_Achr10P...	Banana	cytosol	34.36	29.63
GSMUA_Achr3P25390_001	Banana	cytosol	33.13	29.51
GSMUA_Achr6P10140_001	Banana	cytosol	29.45	29.45
GSMUA_Achr10P...	Banana	cytosol	33.13	28.72
GSMUA_Achr3P26750_001	Banana	cytosol, plasma membrane	24.54	27.03
GSMUA_Achr1P14070_001	Banana	cytosol	34.36	24.78
GSMUA_Achr8P05790_001	Banana	cytosol	15.34	10.2

Protein Annotations

EnsemblPlants:GSMUA_Achr1P25220_001	EnsemblPlants:GSMUA_Achr1T25220_001	EnsemblPlantsGene:GSMUA_Achr1G25220_001	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR44256
PANTHER:PTHR44256:SF6	PFAM:PF13499	PFscan:PS50222	ScanProsite:PS00018	SEG:seg	SMART:SM00054
SUPFAM:SSF47473	UniParc:UPI000295C927	UniProt:M0S2X9	MapMan:35.1	:	:

Description

Probable calcium-binding protein CML14 [Source:GMGC_GENE;Acc:GSMUA_Achr1G25220_001]

Coordinates

chr1:+:19633460..19633951

Molecular Weight (calculated)

17896.3 Da

IEP (calculated)

4.366

GRAVY (calculated)

-0.104

Length

163 amino acids

Sequence
(BLAST)

001: MGRGLHGEHR KQLRDIFDRF DMDRDGSLTH LELAALLRSL GLKPTGDQIH ALLANMDANG NGSVEFDELA VALAPVMTEQ AFVNQEQLLE VFRSFDRDGN
101: GYISAAELAR SMARMGQPLT FLELTEMMRQ ADTDGDGVIS FEEFATVMAK SAAEFLGLTL VAS

Best Arabidopsis Sequence Match ( AT1G18530.1 )
(BLAST)

001: MEDQIRQLKD IFDRFDMDAD GSLTILELAA LLRSLGLKPS GDQIHVLLAS MDSNGNGFVE FDELVGTILP DLNEEVLINS EQLLEIFKSF DRDGNGFISA
101: AELAGAMAKM GQPLTYKELT EMIKEADTNG DGVISFGEFA SIMAKSAVDY FGLKINS

Arabidopsis Description

CML15Probable calcium-binding protein CML15 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ75]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.