Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- plasma membrane 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr7P07720_001 | Banana | cytosol | 80.27 | 79.73 |
GSMUA_Achr7P01390_001 | Banana | cytosol | 77.55 | 77.03 |
GSMUA_Achr2P12680_001 | Banana | cytosol | 76.19 | 75.68 |
GSMUA_Achr4P22570_001 | Banana | cytosol | 76.19 | 75.68 |
GSMUA_Achr1P04700_001 | Banana | cytosol | 71.43 | 70.95 |
GSMUA_Achr5P09010_001 | Banana | cytosol | 70.75 | 70.27 |
GSMUA_Achr6P24410_001 | Banana | cytosol | 70.75 | 69.8 |
GSMUA_Achr1P27230_001 | Banana | cytosol | 70.07 | 69.59 |
GSMUA_Achr6P23670_001 | Banana | cytosol | 70.07 | 69.13 |
GSMUA_Achr3P25040_001 | Banana | cytosol | 70.07 | 69.13 |
GSMUA_Achr10P... | Banana | cytosol, plasma membrane | 69.39 | 68.46 |
GSMUA_Achr6P15990_001 | Banana | cytosol | 69.39 | 68.46 |
GSMUA_Achr5P07820_001 | Banana | cytosol | 69.39 | 68.46 |
GSMUA_Achr3P09330_001 | Banana | cytosol | 69.39 | 68.46 |
GSMUA_Achr2P01120_001 | Banana | cytosol | 69.39 | 68.46 |
GSMUA_Achr9P17280_001 | Banana | cytosol | 68.71 | 67.79 |
GSMUA_Achr10P... | Banana | cytosol | 68.71 | 67.79 |
GSMUA_Achr5P27590_001 | Banana | cytosol | 51.02 | 64.66 |
GSMUA_Achr11P... | Banana | cytosol | 42.86 | 61.76 |
Os03t0743500-02 | Rice | nucleus | 63.27 | 60.39 |
KXG37587 | Sorghum | cytosol | 63.27 | 60.39 |
Zm00001d033980_P001 | Maize | cytosol | 53.74 | 50.32 |
GSMUA_Achr3P25390_001 | Banana | cytosol | 58.5 | 46.99 |
GSMUA_Achr10P... | Banana | cytosol | 59.86 | 46.81 |
GSMUA_Achr10P... | Banana | cytosol | 59.86 | 46.56 |
TraesCS5A01G382800.2 | Wheat | plastid | 56.46 | 44.38 |
GSMUA_Achr1P14070_001 | Banana | cytosol | 62.59 | 40.71 |
GSMUA_Achr3P26750_001 | Banana | cytosol, plasma membrane | 37.41 | 37.16 |
GSMUA_Achr6P10140_001 | Banana | cytosol | 39.46 | 35.58 |
GSMUA_Achr9P21860_001 | Banana | cytosol, mitochondrion | 38.78 | 34.97 |
GSMUA_Achr8P29750_001 | Banana | cytosol, mitochondrion | 38.1 | 34.15 |
GSMUA_Achr1P25220_001 | Banana | cytosol | 37.41 | 33.74 |
GSMUA_Achr8P05790_001 | Banana | cytosol | 32.65 | 19.59 |
KXG37588 | Sorghum | mitochondrion, nucleus | 0.0 | 0.0 |
Protein Annotations
EnsemblPlants:GSMUA_AchrUn_randomP12510_001 | EnsemblPlants:GSMUA_AchrUn_randomT12510_001 | EnsemblPlantsGene:GSMUA_AchrUn_randomG12510_001 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 |
GO:GO:0005509 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR23050 |
PANTHER:PTHR23050:SF336 | PFAM:PF13499 | PFscan:PS50222 | PRINTS:PR00450 | ScanProsite:PS00018 | SMART:SM00054 |
SUPFAM:SSF47473 | UniParc:UPI0002960512 | UniProt:M0U8L0 | MapMan:35.1 | : | : |
Description
Calmodulin [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG12510_001]
Coordinates
chrchrUn_random:+:59704480..59705199
Molecular Weight (calculated)
16651.5 Da
IEP (calculated)
3.719
GRAVY (calculated)
-0.304
Length
147 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLFTEEQIT EFYETFCLFD KDGDGSIALE ELSTVITSLG LKPFREELQG MISEVDVDGN GTIEFAEFLG LMAHKMKDID SEEELKEAFK VFDKDQNGYI
101: SEAELRNVMM SLGEKLTDEE VAQMIREADL DGDGQVNFED FVQMMSA
101: SEAELRNVMM SLGEKLTDEE VAQMIREADL DGDGQVNFED FVQMMSA
001: MADQLTDEQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMAKKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVEEMIREAD VDGDGQINYE EFVKIMMAK
101: ISAAELRHVM TNLGEKLTDE EVEEMIREAD VDGDGQINYE EFVKIMMAK
Arabidopsis Description
CAM4Calmodulin 4 [Source:UniProtKB/TrEMBL;Acc:F4IEU4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.