Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 7
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os07t0537300-00 | Rice | extracellular | 35.56 | 46.18 |
| Os07t0537200-01 | Rice | plasma membrane | 33.96 | 43.64 |
| KRH35616 | Soybean | extracellular | 22.19 | 31.8 |
| AT4G23170.1 | Thale cress | extracellular | 21.93 | 30.94 |
| KRH35615 | Soybean | endoplasmic reticulum, extracellular | 18.98 | 30.74 |
| KRG91167 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 17.11 | 28.96 |
| CDY41770 | Canola | endoplasmic reticulum, vacuole | 19.52 | 28.08 |
| KRG91170 | Soybean | plasma membrane | 20.59 | 27.4 |
| VIT_10s0092g00670.t01 | Wine grape | endoplasmic reticulum, extracellular | 20.59 | 27.21 |
| Bra040999.1-P | Field mustard | extracellular | 18.18 | 26.98 |
| CDY01121 | Canola | extracellular | 18.18 | 26.98 |
| CDY47325 | Canola | endoplasmic reticulum, extracellular, vacuole | 18.18 | 26.88 |
| Os05t0112800-01 | Rice | extracellular | 19.25 | 26.47 |
| Os03t0564600-01 | Rice | extracellular | 17.38 | 26.42 |
| Solyc02g080050.1.1 | Tomato | cytosol | 10.43 | 25.49 |
| Os08t0136300-01 | Rice | extracellular | 18.72 | 25.45 |
| KRH35619 | Soybean | extracellular, plasma membrane, vacuole | 21.39 | 25.08 |
| KRH35620 | Soybean | plasma membrane | 21.93 | 25.0 |
| Os08t0136700-01 | Rice | extracellular | 18.18 | 24.82 |
| CDY12405 | Canola | plasma membrane | 19.25 | 24.57 |
| Os03t0277600-01 | Rice | extracellular | 16.84 | 23.77 |
| Os03t0277700-01 | Rice | extracellular | 16.84 | 23.77 |
| Os03t0312300-01 | Rice | golgi | 11.5 | 23.24 |
| Os08t0136800-01 | Rice | extracellular | 16.31 | 22.1 |
| Os10t0329900-00 | Rice | endoplasmic reticulum, plasma membrane | 23.8 | 22.03 |
| VIT_00s0262g00090.t01 | Wine grape | mitochondrion, plasma membrane | 24.87 | 21.99 |
| Solyc02g080060.1.1 | Tomato | vacuole | 21.39 | 21.8 |
| CDY10852 | Canola | plasma membrane | 21.66 | 21.32 |
| Os08t0136500-01 | Rice | endoplasmic reticulum, vacuole | 15.78 | 21.07 |
| CDY41240 | Canola | extracellular, plasma membrane | 21.39 | 21.05 |
| KRG91214 | Soybean | plasma membrane | 18.72 | 20.9 |
| KRH13264 | Soybean | mitochondrion | 13.1 | 20.76 |
| KRH35613 | Soybean | plasma membrane | 20.59 | 20.42 |
| KRH21653 | Soybean | extracellular | 15.24 | 20.36 |
| KRG91211 | Soybean | plasma membrane | 18.18 | 20.24 |
| VIT_00s0409g00020.t01 | Wine grape | plasma membrane | 24.33 | 19.53 |
| VIT_02s0087g01010.t01 | Wine grape | plasma membrane | 22.46 | 18.83 |
| Bra019321.1-P | Field mustard | mitochondrion | 13.37 | 17.42 |
| CDY15079 | Canola | cytosol, plasma membrane, plastid | 14.97 | 16.52 |
| CDY10860 | Canola | endoplasmic reticulum, plasma membrane | 12.3 | 16.25 |
| VIT_00s0262g00130.t01 | Wine grape | endoplasmic reticulum | 23.8 | 15.48 |
| Bra029565.1-P | Field mustard | plasma membrane | 20.59 | 12.52 |
| CDY39159 | Canola | plasma membrane | 20.05 | 12.46 |
Protein Annotations
| Gene3D:3.30.430.20 | MapMan:35.1 | ProteinID:BAF21806.2 | ProteinID:BAT01962.1 | InterPro:GNK2 | InterPro:GNK2_sf |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 |
| GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR002902 | InterPro:IPR038408 | EnsemblPlantsGene:Os07g0540600 | EnsemblPlants:Os07t0540600-00 |
| PFAM:PF01657 | PFscan:PS51473 | PANTHER:PTHR27002 | PANTHER:PTHR27002:SF96 | UniProt:Q0D5R7 | SignalP:SignalP-noTM |
| TMHMM:TMhelix | UniParc:UPI0001B66DBE | SEG:seg | : | : | : |
Description
Gnk2-homologous domain domain containing protein. (Os07t0540600-00)
Coordinates
chr7:-:21345784..21346908
Molecular Weight (calculated)
40136.8 Da
IEP (calculated)
8.035
GRAVY (calculated)
-0.004
Length
374 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGHRLHLTF WYNLAAVALL LALLHGPLAE AQPLPWQLCN ATAGNYTEGS AYQANVRALA SALPANASSS RALFAEGAAG TAPDKVYAIA LCRGDTNASS
101: CAACLAAAFD TAQQLCAFNR RATLFNDPCI LRYSDQDILA NVTDNRGMFV AWNYNNVSTG RMAVFDATSG QLVNTSGDYA SAVYDAFSGM LVNATADYAA
201: KDSVRRFGTG EMGFNVFDSP YHNIFSLAQC TPDMSEADCR SCLGDIIRRM MPKYFVGKPG GRVFGVRCNF RFEAYEFFSG RPLLQLSGLP PSPPPPGLSA
301: PSGLPPSPPG LRPAASGNIN NREGELLLDR CVLLWLALTI KRTSKIAPPL LVLRPASPGN YRDARFDVGL WGSH
101: CAACLAAAFD TAQQLCAFNR RATLFNDPCI LRYSDQDILA NVTDNRGMFV AWNYNNVSTG RMAVFDATSG QLVNTSGDYA SAVYDAFSGM LVNATADYAA
201: KDSVRRFGTG EMGFNVFDSP YHNIFSLAQC TPDMSEADCR SCLGDIIRRM MPKYFVGKPG GRVFGVRCNF RFEAYEFFSG RPLLQLSGLP PSPPPPGLSA
301: PSGLPPSPPG LRPAASGNIN NREGELLLDR CVLLWLALTI KRTSKIAPPL LVLRPASPGN YRDARFDVGL WGSH
001: MSSLKRIVWF PILAIAIQIL SIHTVLSQSQ NNAFLFHKCS DIEGSFTSKS LYESNLNNLF SQLSYKVPST GFAASSTGNT PNNVNGLALC RGDASSSDCR
101: SCLETAIPEL RQRCPNNKAG IVWYDNCLVK YSSTNFFGKI DFENRFYLYN VKNVSDPSTF NSQTKALLTE LTKKATTRDN QKLFATGEKN IGKNKLYGLV
201: QCTRDLKSIT CKACLNGIIG ELPNCCDGKE GGRVVGGSCN FRYEIYPFVK TA
101: SCLETAIPEL RQRCPNNKAG IVWYDNCLVK YSSTNFFGKI DFENRFYLYN VKNVSDPSTF NSQTKALLTE LTKKATTRDN QKLFATGEKN IGKNKLYGLV
201: QCTRDLKSIT CKACLNGIIG ELPNCCDGKE GGRVVGGSCN FRYEIYPFVK TA
Arabidopsis Description
CRRSP38Cysteine-rich repeat secretory protein 38 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRJ9]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.