Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 5
- golgi 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G052170.1 | Barley | cytosol | 45.53 | 72.26 |
| TraesCS4B01G355900.1 | Wheat | endoplasmic reticulum | 68.7 | 71.31 |
| TraesCS4D01G349300.1 | Wheat | endoplasmic reticulum | 68.7 | 71.31 |
| TraesCS5A01G525100.1 | Wheat | endoplasmic reticulum, extracellular | 68.7 | 71.01 |
| HORVU2Hr1G108130.1 | Barley | cytosol | 45.12 | 70.25 |
| HORVU5Hr1G018110.1 | Barley | cytosol | 45.94 | 63.84 |
| Zm00001d032401_P001 | Maize | extracellular | 63.82 | 61.33 |
| EER91340 | Sorghum | extracellular, golgi | 68.29 | 60.65 |
| HORVU4Hr1G085990.1 | Barley | extracellular, mitochondrion, plasma membrane | 67.07 | 55.0 |
| GSMUA_Achr4P23960_001 | Banana | mitochondrion | 38.62 | 49.74 |
| KRH26839 | Soybean | cytosol | 32.52 | 39.6 |
| KRH26837 | Soybean | cytosol | 25.61 | 36.21 |
| KRH22513 | Soybean | cytosol | 23.98 | 35.76 |
| VIT_12s0059g02580.t01 | Wine grape | extracellular | 34.55 | 35.27 |
| VIT_12s0059g02590.t01 | Wine grape | extracellular | 34.55 | 35.12 |
| VIT_12s0059g02620.t01 | Wine grape | extracellular, plasma membrane | 35.77 | 34.92 |
| KRH22515 | Soybean | endoplasmic reticulum, extracellular | 33.33 | 33.47 |
| KRH22514 | Soybean | endoplasmic reticulum, extracellular | 32.93 | 33.2 |
| PGSC0003DMT400034269 | Potato | mitochondrion | 14.63 | 33.03 |
| AT3G22060.1 | Thale cress | extracellular | 33.74 | 32.94 |
| PGSC0003DMT400034271 | Potato | endoplasmic reticulum, extracellular, vacuole | 31.71 | 32.5 |
| Solyc12g005720.1.1 | Tomato | extracellular | 30.89 | 31.67 |
| CDY68211 | Canola | endoplasmic reticulum, extracellular, vacuole | 32.52 | 31.37 |
| CDY52060 | Canola | endoplasmic reticulum, extracellular, vacuole | 32.52 | 31.37 |
| Bra031321.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 32.11 | 30.98 |
| CDY57408 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 32.11 | 30.98 |
| Os07t0537200-01 | Rice | plasma membrane | 28.05 | 23.71 |
| Os03t0312300-01 | Rice | golgi | 17.48 | 23.24 |
| Os08t0136300-01 | Rice | extracellular | 25.61 | 22.91 |
| Os03t0277700-01 | Rice | extracellular | 23.98 | 22.26 |
| Os07t0537300-00 | Rice | extracellular | 26.02 | 22.22 |
| VIT_12s0059g02600.t01 | Wine grape | extracellular | 34.55 | 21.91 |
| Os08t0136700-01 | Rice | extracellular | 24.39 | 21.9 |
| Os03t0277600-01 | Rice | extracellular | 23.58 | 21.89 |
| Os08t0136500-01 | Rice | endoplasmic reticulum, vacuole | 24.39 | 21.43 |
| Os05t0112800-01 | Rice | extracellular | 23.58 | 21.32 |
| Os08t0136800-01 | Rice | extracellular | 23.58 | 21.01 |
| Os07t0540600-00 | Rice | endoplasmic reticulum, plasma membrane | 26.42 | 17.38 |
| Os10t0329900-00 | Rice | endoplasmic reticulum, plasma membrane | 26.02 | 15.84 |
Protein Annotations
| Gene3D:3.30.430.20 | MapMan:35.1 | ProteinID:BAF12411.1 | ProteinID:BAS84946.1 | InterPro:GNK2 | InterPro:GNK2_sf |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005618 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005773 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009719 | GO:GO:0009737 |
| GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 | GO:GO:0030312 | InterPro:IPR002902 |
| InterPro:IPR038408 | EnsemblPlantsGene:Os03g0564600 | EnsemblPlants:Os03t0564600-01 | PFAM:PF01657 | PFscan:PS51473 | PANTHER:PTHR32099 |
| PANTHER:PTHR32099:SF13 | UniProt:Q0DQS7 | SignalP:SignalP-noTM | UniParc:UPI0000E12115 | SEG:seg | : |
Description
Protein of unknown function DUF26 domain containing protein. (Os03t0564600-01)
Coordinates
chr3:-:20324825..20325721
Molecular Weight (calculated)
25419.4 Da
IEP (calculated)
6.257
GRAVY (calculated)
0.184
Length
246 amino acids
Sequence
(BLAST)
(BLAST)
001: LEAAAFLLLT AAAAAGGAST VVEPVASCSA TDSFAADSSF AGNLGRLVSL LEAKAPAIGF DIATVGVGGD GEDQRVHGLA LCRGDVARAT CAECIRAAGA
101: LARRVCPSKK DAVVWLDACM LRYSGEPFFG EVDAEHRAVV PPARVLRGAD RSADLDREVS RLMKRLTRTA YLSPLLFAAG EAVAVGGAQR LHGMAQCTKD
201: LSGGDCKMCL ESAIDQLLAR GCAKEGGKVL GGSCSLRYDF YSLSDS
101: LARRVCPSKK DAVVWLDACM LRYSGEPFFG EVDAEHRAVV PPARVLRGAD RSADLDREVS RLMKRLTRTA YLSPLLFAAG EAVAVGGAQR LHGMAQCTKD
201: LSGGDCKMCL ESAIDQLLAR GCAKEGGKVL GGSCSLRYDF YSLSDS
001: MSSLKRIVWF PILAIAIQIL SIHTVLSQSQ NNAFLFHKCS DIEGSFTSKS LYESNLNNLF SQLSYKVPST GFAASSTGNT PNNVNGLALC RGDASSSDCR
101: SCLETAIPEL RQRCPNNKAG IVWYDNCLVK YSSTNFFGKI DFENRFYLYN VKNVSDPSTF NSQTKALLTE LTKKATTRDN QKLFATGEKN IGKNKLYGLV
201: QCTRDLKSIT CKACLNGIIG ELPNCCDGKE GGRVVGGSCN FRYEIYPFVK TA
101: SCLETAIPEL RQRCPNNKAG IVWYDNCLVK YSSTNFFGKI DFENRFYLYN VKNVSDPSTF NSQTKALLTE LTKKATTRDN QKLFATGEKN IGKNKLYGLV
201: QCTRDLKSIT CKACLNGIIG ELPNCCDGKE GGRVVGGSCN FRYEIYPFVK TA
Arabidopsis Description
CRRSP38Cysteine-rich repeat secretory protein 38 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRJ9]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.