Factsheet for PGSC0003DMT400034271

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 6
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g005720.1.1	Tomato	extracellular	96.25	96.25
PGSC0003DMT400034269	Potato	mitochondrion	41.25	90.83
VIT_12s0059g02590.t01	Wine grape	extracellular	58.75	58.26
VIT_12s0059g02620.t01	Wine grape	extracellular, plasma membrane	60.42	57.54
VIT_12s0059g02580.t01	Wine grape	extracellular	56.67	56.43
KRH26839	Soybean	cytosol	46.25	54.95
GSMUA_Achr4P23960_001	Banana	mitochondrion	40.83	51.31
AT3G22060.1	Thale cress	extracellular	52.92	50.4
CDY52060	Canola	endoplasmic reticulum, extracellular, vacuole	52.5	49.41
CDY68211	Canola	endoplasmic reticulum, extracellular, vacuole	52.5	49.41
Bra031321.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	52.08	49.02
CDY57408	Canola	endoplasmic reticulum, plasma membrane, vacuole	51.67	48.63
KRH22513	Soybean	cytosol	33.33	48.48
VIT_12s0059g02600.t01	Wine grape	extracellular	58.33	36.08
PGSC0003DMT400091649	Potato	extracellular	35.42	32.08
Os03t0564600-01	Rice	extracellular	32.5	31.71
TraesCS4D01G349300.1	Wheat	endoplasmic reticulum	30.83	31.22
TraesCS5A01G525100.1	Wheat	endoplasmic reticulum, extracellular	30.83	31.09
TraesCS4B01G355900.1	Wheat	endoplasmic reticulum	30.42	30.8
HORVU3Hr1G052170.1	Barley	cytosol	19.17	29.68
Zm00001d032401_P001	Maize	extracellular	30.83	28.91
EER91340	Sorghum	extracellular, golgi	33.33	28.88
HORVU2Hr1G108130.1	Barley	cytosol	18.75	28.48
HORVU5Hr1G018110.1	Barley	cytosol	20.83	28.25
HORVU4Hr1G085990.1	Barley	extracellular, mitochondrion, plasma membrane	31.67	25.33

Protein Annotations

EnsemblPlants:PGSC0003DMT400034271	EnsemblPlantsGene:PGSC0003DMG400013176	EntrezGene:102586615	Gene3D:3.30.430.20	InterPro:GNK2	InterPro:GNK2_sf
InterPro:IPR002902	InterPro:IPR038408	PANTHER:PTHR32411	PANTHER:PTHR32411:SF42	PFAM:PF01657	PFscan:PS51473
PGSC:PGSC0003DMG400013176	RefSeq:XP_006351953.1	SignalP:SignalP-noTM	UniParc:UPI000295E311	UniProt:M1B0E5	MapMan:35.1

Description

DUF26 domain-containing protein 2 [Source:PGSC_GENE;Acc:PGSC0003DMG400013176]

Coordinates

chr12:+:6769684..6770585

Molecular Weight (calculated)

26887.7 Da

IEP (calculated)

4.935

GRAVY (calculated)

-0.290

Length

240 amino acids

Sequence
(BLAST)

001: MSSSKLISCL FFLSSIALVI STDPLFHFCS NSENFTANSY YAQNLKNLLG DLYLKTPPTG FSTSSIGQNH DQTNGLSLCR GDVSSNSCKS CVLDASEELG
101: KRCPYDKEAI IWYDNCLLKY SNKDFLGNID NTYKFYMWNV RVVSNPEYFN AKTKELLGSL SENAYKTSNL YAIGEMEIEE NKKLYGLVQC TRDISNEDCK
201: KCLDGIITEI PSCCDGKEGG RVVGGSCNFR YEIYPFVNIP

Best Arabidopsis Sequence Match ( AT3G22060.1 )
(BLAST)

001: MSSLKRIVWF PILAIAIQIL SIHTVLSQSQ NNAFLFHKCS DIEGSFTSKS LYESNLNNLF SQLSYKVPST GFAASSTGNT PNNVNGLALC RGDASSSDCR
101: SCLETAIPEL RQRCPNNKAG IVWYDNCLVK YSSTNFFGKI DFENRFYLYN VKNVSDPSTF NSQTKALLTE LTKKATTRDN QKLFATGEKN IGKNKLYGLV
201: QCTRDLKSIT CKACLNGIIG ELPNCCDGKE GGRVVGGSCN FRYEIYPFVK TA

Arabidopsis Description

CRRSP38Cysteine-rich repeat secretory protein 38 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRJ9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.