Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY52060 | Canola | endoplasmic reticulum, extracellular, vacuole | 82.54 | 81.57 |
| CDY68211 | Canola | endoplasmic reticulum, extracellular, vacuole | 82.54 | 81.57 |
| Bra031321.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 78.97 | 78.04 |
| CDY57408 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 78.97 | 78.04 |
| PGSC0003DMT400034269 | Potato | mitochondrion | 26.59 | 61.47 |
| KRH26837 | Soybean | cytosol | 39.29 | 56.9 |
| KRH22514 | Soybean | endoplasmic reticulum, extracellular | 53.17 | 54.92 |
| VIT_12s0059g02590.t01 | Wine grape | extracellular | 51.59 | 53.72 |
| PGSC0003DMT400034271 | Potato | endoplasmic reticulum, extracellular, vacuole | 50.4 | 52.92 |
| GSMUA_Achr4P23960_001 | Banana | mitochondrion | 39.68 | 52.36 |
| KRH22515 | Soybean | endoplasmic reticulum, extracellular | 50.79 | 52.24 |
| Solyc12g005720.1.1 | Tomato | extracellular | 49.6 | 52.08 |
| VIT_12s0059g02620.t01 | Wine grape | extracellular, plasma membrane | 50.79 | 50.79 |
| KRH26839 | Soybean | cytosol | 40.08 | 50.0 |
| VIT_12s0059g02580.t01 | Wine grape | extracellular | 46.83 | 48.96 |
| KRH22513 | Soybean | cytosol | 30.95 | 47.27 |
| TraesCS5A01G525100.1 | Wheat | endoplasmic reticulum, extracellular | 32.94 | 34.87 |
| TraesCS4B01G355900.1 | Wheat | endoplasmic reticulum | 32.14 | 34.18 |
| TraesCS4D01G349300.1 | Wheat | endoplasmic reticulum | 32.14 | 34.18 |
| Os03t0564600-01 | Rice | extracellular | 32.94 | 33.74 |
| VIT_12s0059g02600.t01 | Wine grape | extracellular | 50.0 | 32.47 |
| HORVU3Hr1G052170.1 | Barley | cytosol | 19.84 | 32.26 |
| HORVU2Hr1G108130.1 | Barley | cytosol | 19.44 | 31.01 |
| Zm00001d032401_P001 | Maize | extracellular | 30.95 | 30.47 |
| AT5G48540.1 | Thale cress | extracellular | 30.95 | 29.66 |
| HORVU5Hr1G018110.1 | Barley | cytosol | 20.63 | 29.38 |
| EER91340 | Sorghum | extracellular, golgi | 32.14 | 29.24 |
| AT4G23170.1 | Thale cress | extracellular | 30.56 | 29.06 |
| HORVU4Hr1G085990.1 | Barley | extracellular, mitochondrion, plasma membrane | 33.73 | 28.33 |
Protein Annotations
| Gene3D:3.30.430.20 | MapMan:35.1 | EntrezGene:821768 | UniProt:A0A178V6U1 | ProteinID:AAN46194.1 | ProteinID:AAN46195.1 |
| ProteinID:AAN46196.1 | ProteinID:AAN46197.1 | ProteinID:AAN46198.1 | ProteinID:AAN46199.1 | ProteinID:AAN46200.1 | ProteinID:AAN46201.1 |
| ProteinID:AAN46202.1 | ProteinID:AAN46203.1 | ProteinID:AAN46204.1 | ProteinID:AAN46205.1 | ProteinID:AEE76585.1 | ArrayExpress:AT3G22060 |
| EnsemblPlantsGene:AT3G22060 | RefSeq:AT3G22060 | TAIR:AT3G22060 | RefSeq:AT3G22060-TAIR-G | EnsemblPlants:AT3G22060.1 | TAIR:AT3G22060.1 |
| EMBL:AY034900 | ProteinID:BAB01391.1 | EMBL:BT024900 | InterPro:GNK2 | InterPro:GNK2_sf | GO:GO:0005575 |
| GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 |
| GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009737 | GO:GO:0030312 | InterPro:IPR002902 | InterPro:IPR038408 |
| RefSeq:NP_566697.1 | ProteinID:OAP01596.1 | PFAM:PF01657 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PFscan:PS51473 | PANTHER:PTHR32411 | PANTHER:PTHR32411:SF42 | UniProt:Q9LRJ9 | SignalP:SignalP-noTM | TMHMM:TMhelix |
| UniParc:UPI00000A6048 | SEG:seg | : | : | : | : |
Description
CRRSP38Cysteine-rich repeat secretory protein 38 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRJ9]
Coordinates
chr3:+:7770899..7772357
Molecular Weight (calculated)
27865.2 Da
IEP (calculated)
8.898
GRAVY (calculated)
-0.242
Length
252 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSLKRIVWF PILAIAIQIL SIHTVLSQSQ NNAFLFHKCS DIEGSFTSKS LYESNLNNLF SQLSYKVPST GFAASSTGNT PNNVNGLALC RGDASSSDCR
101: SCLETAIPEL RQRCPNNKAG IVWYDNCLVK YSSTNFFGKI DFENRFYLYN VKNVSDPSTF NSQTKALLTE LTKKATTRDN QKLFATGEKN IGKNKLYGLV
201: QCTRDLKSIT CKACLNGIIG ELPNCCDGKE GGRVVGGSCN FRYEIYPFVK TA
101: SCLETAIPEL RQRCPNNKAG IVWYDNCLVK YSSTNFFGKI DFENRFYLYN VKNVSDPSTF NSQTKALLTE LTKKATTRDN QKLFATGEKN IGKNKLYGLV
201: QCTRDLKSIT CKACLNGIIG ELPNCCDGKE GGRVVGGSCN FRYEIYPFVK TA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.