Subcellular Localization
min:
: max
Winner_takes_all: extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 6
- golgi 5
- plasma membrane 7
- endoplasmic reticulum 5
- vacuole 5
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_12s0059g02590.t01 | Wine grape | extracellular | 83.73 | 87.19 |
| VIT_12s0059g02580.t01 | Wine grape | extracellular | 72.22 | 75.52 |
| PGSC0003DMT400034269 | Potato | mitochondrion | 29.37 | 67.89 |
| KRH26837 | Soybean | cytosol | 44.05 | 63.79 |
| KRH22514 | Soybean | endoplasmic reticulum, extracellular | 60.32 | 62.3 |
| PGSC0003DMT400034271 | Potato | endoplasmic reticulum, extracellular, vacuole | 57.54 | 60.42 |
| KRH22515 | Soybean | endoplasmic reticulum, extracellular | 57.14 | 58.78 |
| Solyc12g005720.1.1 | Tomato | extracellular | 55.56 | 58.33 |
| VIT_12s0059g02600.t01 | Wine grape | extracellular | 83.73 | 54.38 |
| GSMUA_Achr4P23960_001 | Banana | mitochondrion | 40.48 | 53.4 |
| CDY52060 | Canola | endoplasmic reticulum, extracellular, vacuole | 53.17 | 52.55 |
| CDY68211 | Canola | endoplasmic reticulum, extracellular, vacuole | 53.17 | 52.55 |
| Bra031321.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 52.38 | 51.76 |
| CDY57408 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 52.38 | 51.76 |
| AT3G22060.1 | Thale cress | extracellular | 50.79 | 50.79 |
| Os03t0564600-01 | Rice | extracellular | 34.92 | 35.77 |
| TraesCS5A01G525100.1 | Wheat | endoplasmic reticulum, extracellular | 32.94 | 34.87 |
| TraesCS4B01G355900.1 | Wheat | endoplasmic reticulum | 32.54 | 34.6 |
| TraesCS4D01G349300.1 | Wheat | endoplasmic reticulum | 32.54 | 34.6 |
| HORVU3Hr1G052170.1 | Barley | cytosol | 21.03 | 34.19 |
| VIT_07s0141g00930.t01 | Wine grape | extracellular | 34.52 | 33.21 |
| HORVU2Hr1G108130.1 | Barley | cytosol | 20.63 | 32.91 |
| HORVU5Hr1G018110.1 | Barley | cytosol | 22.22 | 31.64 |
| Zm00001d032401_P001 | Maize | extracellular | 31.35 | 30.86 |
| EER91340 | Sorghum | extracellular, golgi | 33.73 | 30.69 |
| HORVU4Hr1G085990.1 | Barley | extracellular, mitochondrion, plasma membrane | 35.32 | 29.67 |
| VIT_07s0141g00870.t01 | Wine grape | cytosol | 17.06 | 28.48 |
| VIT_07s0141g00840.t01 | Wine grape | extracellular | 29.76 | 27.57 |
| VIT_10s0092g00670.t01 | Wine grape | endoplasmic reticulum, extracellular | 28.97 | 25.8 |
| VIT_00s0262g00090.t01 | Wine grape | mitochondrion, plasma membrane | 38.89 | 23.17 |
| VIT_02s0087g01010.t01 | Wine grape | plasma membrane | 38.89 | 21.97 |
| VIT_01s0026g02270.t01 | Wine grape | plasma membrane, vacuole | 23.41 | 18.97 |
| VIT_00s0409g00020.t01 | Wine grape | plasma membrane | 33.73 | 18.24 |
| VIT_00s0262g00130.t01 | Wine grape | endoplasmic reticulum | 34.52 | 15.13 |
Protein Annotations
| EntrezGene:100267027 | wikigene:100267027 | Gene3D:3.30.430.20 | MapMan:35.1 | EMBL:AM481918 | ProteinID:CAN73036 |
| ProteinID:CAN73036.1 | ProteinID:CCB52063 | ProteinID:CCB52063.1 | UniProt:F6HIL7 | EMBL:FN595765 | InterPro:GNK2 |
| InterPro:GNK2_sf | InterPro:IPR002902 | InterPro:IPR038408 | EntrezGene:LOC100267027 | wikigene:LOC100267027 | PFAM:PF01657 |
| PFscan:PS51473 | PANTHER:PTHR32411 | PANTHER:PTHR32411:SF42 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI00019845FA |
| ArrayExpress:VIT_12s0059g02620 | EnsemblPlantsGene:VIT_12s0059g02620 | EnsemblPlants:VIT_12s0059g02620.t01 | RefSeq:XP_002274745 | RefSeq:XP_002274745.1 | SEG:seg |
Description
No Description!
Coordinates
chr12:+:7349662..7350420
Molecular Weight (calculated)
28182.6 Da
IEP (calculated)
6.483
GRAVY (calculated)
-0.249
Length
252 amino acids
Sequence
(BLAST)
(BLAST)
001: MKPSPALSKM SFSRFASFLY LLSFVLLLQT VVGVDPLFHF CSSSEKFIDN GPYETNLNKL MGYLYLAAPP TGSGKGSVGQ NHDQVNGLAL CRGDVSNTDC
101: KDCITEASTE IRKLCPDNKA AIVWYDHCLL KYSNMNFFGQ VDYQNRFYMW NLNNVSYPTS FNQKTKELLS HLAQQGFVNQ KMYAVGELEL EESKKLYGLT
201: QCTRDLSSSD CKKCLDDAIS ELPSCCDGKE GGRVVGGSCN IRYEIYPFLV NS
101: KDCITEASTE IRKLCPDNKA AIVWYDHCLL KYSNMNFFGQ VDYQNRFYMW NLNNVSYPTS FNQKTKELLS HLAQQGFVNQ KMYAVGELEL EESKKLYGLT
201: QCTRDLSSSD CKKCLDDAIS ELPSCCDGKE GGRVVGGSCN IRYEIYPFLV NS
001: MSSLKRIVWF PILAIAIQIL SIHTVLSQSQ NNAFLFHKCS DIEGSFTSKS LYESNLNNLF SQLSYKVPST GFAASSTGNT PNNVNGLALC RGDASSSDCR
101: SCLETAIPEL RQRCPNNKAG IVWYDNCLVK YSSTNFFGKI DFENRFYLYN VKNVSDPSTF NSQTKALLTE LTKKATTRDN QKLFATGEKN IGKNKLYGLV
201: QCTRDLKSIT CKACLNGIIG ELPNCCDGKE GGRVVGGSCN FRYEIYPFVK TA
101: SCLETAIPEL RQRCPNNKAG IVWYDNCLVK YSSTNFFGKI DFENRFYLYN VKNVSDPSTF NSQTKALLTE LTKKATTRDN QKLFATGEKN IGKNKLYGLV
201: QCTRDLKSIT CKACLNGIIG ELPNCCDGKE GGRVVGGSCN FRYEIYPFVK TA
Arabidopsis Description
CRRSP38Cysteine-rich repeat secretory protein 38 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRJ9]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.