Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
29876421
|
msms PMID:
29876421
doi
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400034271 | Potato | endoplasmic reticulum, extracellular, vacuole | 96.25 | 96.25 |
| VIT_12s0059g02590.t01 | Wine grape | extracellular | 56.67 | 56.2 |
| VIT_12s0059g02620.t01 | Wine grape | extracellular, plasma membrane | 58.33 | 55.56 |
| VIT_12s0059g02580.t01 | Wine grape | extracellular | 55.0 | 54.77 |
| KRH26839 | Soybean | cytosol | 45.83 | 54.46 |
| GSMUA_Achr4P23960_001 | Banana | mitochondrion | 40.83 | 51.31 |
| AT3G22060.1 | Thale cress | extracellular | 52.08 | 49.6 |
| CDY52060 | Canola | endoplasmic reticulum, extracellular, vacuole | 51.67 | 48.63 |
| CDY68211 | Canola | endoplasmic reticulum, extracellular, vacuole | 51.67 | 48.63 |
| KRH22513 | Soybean | cytosol | 33.33 | 48.48 |
| Bra031321.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 51.25 | 48.24 |
| CDY57408 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 50.83 | 47.84 |
| VIT_12s0059g02600.t01 | Wine grape | extracellular | 56.67 | 35.05 |
| Solyc09g057960.1.1 | Tomato | extracellular, nucleus | 34.58 | 31.8 |
| Os03t0564600-01 | Rice | extracellular | 31.67 | 30.89 |
| TraesCS4D01G349300.1 | Wheat | endoplasmic reticulum | 30.0 | 30.38 |
| HORVU3Hr1G052170.1 | Barley | cytosol | 19.58 | 30.32 |
| TraesCS5A01G525100.1 | Wheat | endoplasmic reticulum, extracellular | 30.0 | 30.25 |
| TraesCS4B01G355900.1 | Wheat | endoplasmic reticulum | 29.58 | 29.96 |
| Solyc02g080050.1.1 | Tomato | cytosol | 18.75 | 29.41 |
| HORVU2Hr1G108130.1 | Barley | cytosol | 19.17 | 29.11 |
| EER91340 | Sorghum | extracellular, golgi | 32.92 | 28.52 |
| HORVU5Hr1G018110.1 | Barley | cytosol | 20.83 | 28.25 |
| Zm00001d032401_P001 | Maize | extracellular | 30.0 | 28.12 |
| HORVU4Hr1G085990.1 | Barley | extracellular, mitochondrion, plasma membrane | 31.25 | 25.0 |
| Solyc02g080060.1.1 | Tomato | vacuole | 32.5 | 21.25 |
Protein Annotations
| EnsemblPlants:Solyc12g005720.1.1 | EnsemblPlantsGene:Solyc12g005720.1 | Gene3D:3.30.430.20 | InterPro:GNK2 | InterPro:GNK2_sf | InterPro:IPR002902 |
| InterPro:IPR038408 | PANTHER:PTHR32411 | PANTHER:PTHR32411:SF42 | PFAM:PF01657 | PFscan:PS51473 | SignalP:SignalP-noTM |
| UniParc:UPI000276A499 | UniProt:K4DBB0 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr12:-:382632..383354
Molecular Weight (calculated)
27009.9 Da
IEP (calculated)
4.944
GRAVY (calculated)
-0.310
Length
240 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSKLISCL FFLSSIAIVI STDPLFHFCS NHENFTANSY YAQNLKNLLG DLYLKTPPTG FSTSSIGQNH DQTNGLSLCR GDVTSNNCKS CVLDASEELG
101: KRCPYDKEAI IWYDNCLLKY SDKDFLGNID NTYKFYMWNV RVVSNPEYFN AKTKELLGSL SENAYKTTNL YAIGEMEIEE NKKLYGLVQC TRDLSNEDCK
201: KCVDGIITEI PSCCDGKEGG RVVSGSCNFR YEIYPFVNIP
101: KRCPYDKEAI IWYDNCLLKY SDKDFLGNID NTYKFYMWNV RVVSNPEYFN AKTKELLGSL SENAYKTTNL YAIGEMEIEE NKKLYGLVQC TRDLSNEDCK
201: KCVDGIITEI PSCCDGKEGG RVVSGSCNFR YEIYPFVNIP
001: MSSLKRIVWF PILAIAIQIL SIHTVLSQSQ NNAFLFHKCS DIEGSFTSKS LYESNLNNLF SQLSYKVPST GFAASSTGNT PNNVNGLALC RGDASSSDCR
101: SCLETAIPEL RQRCPNNKAG IVWYDNCLVK YSSTNFFGKI DFENRFYLYN VKNVSDPSTF NSQTKALLTE LTKKATTRDN QKLFATGEKN IGKNKLYGLV
201: QCTRDLKSIT CKACLNGIIG ELPNCCDGKE GGRVVGGSCN FRYEIYPFVK TA
101: SCLETAIPEL RQRCPNNKAG IVWYDNCLVK YSSTNFFGKI DFENRFYLYN VKNVSDPSTF NSQTKALLTE LTKKATTRDN QKLFATGEKN IGKNKLYGLV
201: QCTRDLKSIT CKACLNGIIG ELPNCCDGKE GGRVVGGSCN FRYEIYPFVK TA
Arabidopsis Description
CRRSP38Cysteine-rich repeat secretory protein 38 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRJ9]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.