Subcellular Localization
min:
: max
Winner_takes_all: extracellular, nucleus
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 7
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
28394025
|
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400091649 | Potato | extracellular | 91.57 | 90.19 |
| KRG99540 | Soybean | extracellular | 52.49 | 53.31 |
| VIT_07s0141g00930.t01 | Wine grape | extracellular | 52.11 | 51.91 |
| VIT_07s0141g00870.t01 | Wine grape | cytosol | 29.89 | 51.66 |
| AT5G48540.1 | Thale cress | extracellular | 49.04 | 48.67 |
| GSMUA_Achr10P... | Banana | extracellular | 45.21 | 46.09 |
| Bra037480.1-P | Field mustard | extracellular | 45.98 | 45.98 |
| CDX85345 | Canola | plasma membrane | 45.98 | 45.98 |
| CDX86299 | Canola | extracellular | 45.98 | 45.98 |
| VIT_07s0141g00840.t01 | Wine grape | extracellular | 45.98 | 44.12 |
| GSMUA_Achr10P... | Banana | extracellular | 42.15 | 42.8 |
| GSMUA_Achr10P... | Banana | extracellular | 41.76 | 42.41 |
| TraesCS4B01G205300.1 | Wheat | extracellular | 39.46 | 39.31 |
| Zm00001d028651_P001 | Maize | extracellular | 40.23 | 39.18 |
| TraesCS4A01G099000.1 | Wheat | extracellular | 40.23 | 38.89 |
| Os03t0277700-01 | Rice | extracellular | 39.46 | 38.87 |
| TraesCS4D01G206200.1 | Wheat | extracellular | 39.46 | 38.15 |
| Os03t0277600-01 | Rice | extracellular | 38.31 | 37.74 |
| HORVU4Hr1G059150.3 | Barley | extracellular | 37.55 | 37.12 |
| EER92464 | Sorghum | endoplasmic reticulum, extracellular | 38.7 | 36.59 |
| Solyc12g005720.1.1 | Tomato | extracellular | 31.8 | 34.58 |
| TraesCS1B01G045300.1 | Wheat | endoplasmic reticulum, extracellular | 36.02 | 34.56 |
| Os08t0136300-01 | Rice | extracellular | 36.4 | 34.55 |
| Os08t0136700-01 | Rice | extracellular | 36.02 | 34.31 |
| TraesCS1A01G035600.1 | Wheat | endoplasmic reticulum, plasma membrane | 35.63 | 34.19 |
| Os08t0136800-01 | Rice | extracellular | 35.63 | 33.7 |
| TraesCS1D01G037000.1 | Wheat | endoplasmic reticulum, vacuole | 34.87 | 33.09 |
| Os08t0136500-01 | Rice | endoplasmic reticulum, vacuole | 35.25 | 32.86 |
| Zm00001d035646_P001 | Maize | endoplasmic reticulum, extracellular | 34.1 | 32.84 |
| Os05t0112800-01 | Rice | extracellular | 33.72 | 32.35 |
| TraesCS1D01G036900.1 | Wheat | plastid | 36.02 | 31.44 |
| Os03t0312300-01 | Rice | golgi | 22.22 | 31.35 |
| EES18898 | Sorghum | cytosol, peroxisome, plastid | 35.25 | 30.46 |
| Solyc02g080050.1.1 | Tomato | cytosol | 17.62 | 30.07 |
| Solyc02g080060.1.1 | Tomato | vacuole | 22.61 | 16.08 |
Protein Annotations
| EnsemblPlants:Solyc09g057960.1.1 | EnsemblPlantsGene:Solyc09g057960.1 | Gene3D:3.30.430.20 | GO:GO:0008150 | GO:GO:0009628 | GO:GO:0080167 |
| InterPro:GNK2 | InterPro:GNK2_sf | InterPro:IPR002902 | InterPro:IPR038408 | PANTHER:PTHR32411 | PANTHER:PTHR32411:SF43 |
| PFAM:PF01657 | PFscan:PS51473 | SEG:seg | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000276B55C |
| UniProt:K4CTI5 | MapMan:35.1 | : | : | : | : |
Description
Cysteine-rich repeat secretory protein 55 [Source:Projected from Arabidopsis thaliana (AT5G48540) UniProtKB/Swiss-Prot;Acc:Q9LV60]
Coordinates
chr9:-:52556985..52557770
Molecular Weight (calculated)
29529.5 Da
IEP (calculated)
8.407
GRAVY (calculated)
-0.105
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFLHYSFLL ILVFCICTAV SVNPLGNFCY DASKSNDAKT SANIGKVLAE LVSVSAKDTF STTSYGDAKN QVYGLYQCRG DVSSNDCSSC IRDAAKEIRK
101: SCPDQTDARI WYDYCFLRYQ AKNFFGQAET VPGIFYWNIN FVSDPDFFNK KLAQLKNQII EQAIVQKNKG LGKGKIKISP FLTLYALMQC TRDLQKIDCA
201: QCLAVAVGNF PTTCLNRKGC RVLYSSCYVR YELYPFFFPL EPKEKLANVS MDYHTFKMSE P
101: SCPDQTDARI WYDYCFLRYQ AKNFFGQAET VPGIFYWNIN FVSDPDFFNK KLAQLKNQII EQAIVQKNKG LGKGKIKISP FLTLYALMQC TRDLQKIDCA
201: QCLAVAVGNF PTTCLNRKGC RVLYSSCYVR YELYPFFFPL EPKEKLANVS MDYHTFKMSE P
001: MKTLVVKCFL LLALVCSCRA ADSIWQLCNT NSNISASSQV SKNIDSLLAT LVSKTPSKGF KTTTSSSYNN KEKVYGLAQC RGDISNTDCS TCIQDAAKKI
101: REVCQNQSDS RILYDFCFLR YSQENFIGKL DTGAGLIYFN VANVTEIDPK KFDNELGALF DKIRSEAVLP KNKGLGKGKT KLTPFVTLNG LVQCTRDLSE
201: LDCAQCFATA VGSFMTTCHN KKGCRVLYSS CYVRYEFYPF YFPLDPAKTG PSVGRISSVH LSP
101: REVCQNQSDS RILYDFCFLR YSQENFIGKL DTGAGLIYFN VANVTEIDPK KFDNELGALF DKIRSEAVLP KNKGLGKGKT KLTPFVTLNG LVQCTRDLSE
201: LDCAQCFATA VGSFMTTCHN KKGCRVLYSS CYVRYEFYPF YFPLDPAKTG PSVGRISSVH LSP
Arabidopsis Description
CRRSP55Cysteine-rich repeat secretory protein 55 [Source:UniProtKB/Swiss-Prot;Acc:Q9LV60]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.