Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 7
- vacuole 4
- plasma membrane 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX85345 | Canola | plasma membrane | 85.93 | 86.59 |
| Bra037480.1-P | Field mustard | extracellular | 85.55 | 86.21 |
| CDX86299 | Canola | extracellular | 85.55 | 86.21 |
| KRG99540 | Soybean | extracellular | 53.99 | 55.25 |
| VIT_07s0141g00870.t01 | Wine grape | cytosol | 31.18 | 54.3 |
| VIT_07s0141g00930.t01 | Wine grape | extracellular | 53.23 | 53.44 |
| VIT_07s0141g00840.t01 | Wine grape | extracellular | 51.33 | 49.63 |
| Solyc09g057960.1.1 | Tomato | extracellular, nucleus | 48.67 | 49.04 |
| GSMUA_Achr10P... | Banana | extracellular | 47.15 | 48.25 |
| GSMUA_Achr10P... | Banana | extracellular | 47.15 | 48.25 |
| GSMUA_Achr10P... | Banana | extracellular | 46.01 | 47.27 |
| PGSC0003DMT400091649 | Potato | extracellular | 47.53 | 47.17 |
| TraesCS4B01G205300.1 | Wheat | extracellular | 43.35 | 43.51 |
| HORVU4Hr1G059150.3 | Barley | extracellular | 42.59 | 42.42 |
| TraesCS4A01G099000.1 | Wheat | extracellular | 43.35 | 42.22 |
| TraesCS4D01G206200.1 | Wheat | extracellular | 42.97 | 41.85 |
| Zm00001d028651_P001 | Maize | extracellular | 42.59 | 41.79 |
| Os03t0277600-01 | Rice | extracellular | 41.06 | 40.75 |
| EER92464 | Sorghum | endoplasmic reticulum, extracellular | 42.21 | 40.22 |
| Os03t0277700-01 | Rice | extracellular | 39.92 | 39.62 |
| TraesCS1A01G035600.1 | Wheat | endoplasmic reticulum, plasma membrane | 40.68 | 39.34 |
| TraesCS1B01G045300.1 | Wheat | endoplasmic reticulum, extracellular | 39.54 | 38.24 |
| TraesCS1D01G037000.1 | Wheat | endoplasmic reticulum, vacuole | 39.54 | 37.82 |
| Os08t0136700-01 | Rice | extracellular | 37.64 | 36.13 |
| Os08t0136300-01 | Rice | extracellular | 37.26 | 35.64 |
| TraesCS1D01G036900.1 | Wheat | plastid | 39.92 | 35.12 |
| Os08t0136800-01 | Rice | extracellular | 36.5 | 34.78 |
| Os05t0112800-01 | Rice | extracellular | 34.98 | 33.82 |
| Zm00001d035646_P001 | Maize | endoplasmic reticulum, extracellular | 34.6 | 33.58 |
| Os03t0312300-01 | Rice | golgi | 23.19 | 32.97 |
| Os08t0136500-01 | Rice | endoplasmic reticulum, vacuole | 34.98 | 32.86 |
| EES18898 | Sorghum | cytosol, peroxisome, plastid | 37.26 | 32.45 |
| AT3G22060.1 | Thale cress | extracellular | 29.66 | 30.95 |
| AT4G23170.1 | Thale cress | extracellular | 26.24 | 26.04 |
Protein Annotations
| Gene3D:3.30.430.20 | MapMan:35.1 | EntrezGene:834910 | ProteinID:AED95683.1 | ArrayExpress:AT5G48540 | EnsemblPlantsGene:AT5G48540 |
| RefSeq:AT5G48540 | TAIR:AT5G48540 | RefSeq:AT5G48540-TAIR-G | EnsemblPlants:AT5G48540.1 | TAIR:AT5G48540.1 | EMBL:AY050924 |
| EMBL:AY091425 | Unigene:At.7058 | Unigene:At.74064 | ProteinID:BAA96974.1 | InterPro:GNK2 | InterPro:GNK2_sf |
| GO:GO:0005575 | GO:GO:0005576 | GO:GO:0008150 | GO:GO:0009628 | GO:GO:0080167 | InterPro:IPR002902 |
| InterPro:IPR038408 | RefSeq:NP_199665.1 | PFAM:PF01657 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PFscan:PS51257 | PFscan:PS51473 | PANTHER:PTHR32411 | PANTHER:PTHR32411:SF49 |
| UniProt:Q9LV60 | SignalP:SignalP-noTM | UniParc:UPI00000A89F1 | SEG:seg | : | : |
Description
CRRSP55Cysteine-rich repeat secretory protein 55 [Source:UniProtKB/Swiss-Prot;Acc:Q9LV60]
Coordinates
chr5:-:19668964..19669920
Molecular Weight (calculated)
28996.8 Da
IEP (calculated)
8.670
GRAVY (calculated)
-0.129
Length
263 amino acids
Sequence
(BLAST)
(BLAST)
001: MKTLVVKCFL LLALVCSCRA ADSIWQLCNT NSNISASSQV SKNIDSLLAT LVSKTPSKGF KTTTSSSYNN KEKVYGLAQC RGDISNTDCS TCIQDAAKKI
101: REVCQNQSDS RILYDFCFLR YSQENFIGKL DTGAGLIYFN VANVTEIDPK KFDNELGALF DKIRSEAVLP KNKGLGKGKT KLTPFVTLNG LVQCTRDLSE
201: LDCAQCFATA VGSFMTTCHN KKGCRVLYSS CYVRYEFYPF YFPLDPAKTG PSVGRISSVH LSP
101: REVCQNQSDS RILYDFCFLR YSQENFIGKL DTGAGLIYFN VANVTEIDPK KFDNELGALF DKIRSEAVLP KNKGLGKGKT KLTPFVTLNG LVQCTRDLSE
201: LDCAQCFATA VGSFMTTCHN KKGCRVLYSS CYVRYEFYPF YFPLDPAKTG PSVGRISSVH LSP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.