Factsheet for Zm00001d028651_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER92464	Sorghum	endoplasmic reticulum, extracellular	90.67	88.04
TraesCS4B01G205300.1	Wheat	extracellular	74.63	76.34
TraesCS4A01G099000.1	Wheat	extracellular	75.37	74.81
Os03t0277600-01	Rice	extracellular	73.88	74.72
HORVU4Hr1G059150.3	Barley	extracellular	73.13	74.24
TraesCS4D01G206200.1	Wheat	extracellular	74.25	73.7
Os03t0277700-01	Rice	extracellular	71.27	72.08
Os08t0136300-01	Rice	extracellular	61.57	60.0
Os08t0136700-01	Rice	extracellular	60.45	59.12
Os08t0136800-01	Rice	extracellular	60.45	58.7
GSMUA_Achr10P...	Banana	extracellular	55.22	57.59
GSMUA_Achr10P...	Banana	extracellular	54.48	56.81
Os03t0312300-01	Rice	golgi	38.81	56.22
Os08t0136500-01	Rice	endoplasmic reticulum, vacuole	57.46	55.0
GSMUA_Achr10P...	Banana	extracellular	50.37	52.73
Bra037480.1-P	Field mustard	extracellular	42.54	43.68
CDX86299	Canola	extracellular	42.54	43.68
CDX85345	Canola	plasma membrane	42.54	43.68
AT5G48540.1	Thale cress	extracellular	41.79	42.59
KRG99540	Soybean	extracellular	39.55	41.25
VIT_07s0141g00930.t01	Wine grape	extracellular	40.3	41.22
Solyc09g057960.1.1	Tomato	extracellular, nucleus	39.18	40.23
VIT_07s0141g00870.t01	Wine grape	cytosol	21.64	38.41
Zm00001d035646_P001	Maize	endoplasmic reticulum, extracellular	38.81	38.38
PGSC0003DMT400091649	Potato	extracellular	37.69	38.11
VIT_07s0141g00840.t01	Wine grape	extracellular	38.06	37.5
Zm00001d032401_P001	Maize	extracellular	22.39	23.44
Zm00001d021693_P001	Maize	endoplasmic reticulum, plasma membrane	21.27	19.86
Zm00001d021683_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	26.12	13.75
Zm00001d040823_P001	Maize	plasma membrane	23.13	12.55
Zm00001d030212_P001	Maize	plasma membrane	22.01	11.64

Protein Annotations

EMBL:BT040850	EnsemblPlants:Zm00001d028651_P001	EnsemblPlants:Zm00001d028651_T001	EnsemblPlantsGene:Zm00001d028651	EntrezGene:107305682	Gene3D:3.30.430.20
InterPro:GNK2	InterPro:GNK2_sf	InterPro:IPR002902	InterPro:IPR038408	PANTHER:PTHR32411	PANTHER:PTHR32411:SF43
PFAM:PF01657	PFscan:PS51473	ProteinID:ONL96634.1	SEG:seg	SignalP:SignalP-noTM	UniParc:UPI00017B7CD4
UniProt:B4FUR2	MapMan:35.1	:	:	:	:

Description

wusl1032Cysteine-rich repeat secretory protein 55

Coordinates

chr1:-:41801401..41802524

Molecular Weight (calculated)

28115.4 Da

IEP (calculated)

7.885

GRAVY (calculated)

0.066

Length

268 amino acids

Sequence
(BLAST)

001: MESSRMRCCM LLVVSLALLL PLGMAADSIG SYCSGSSYAG SSKAVANINS VLADLVASAS STGGYATSTA GKGNNSIIYG LAQCRGDVSA SDCASCLADA
101: AKQLPSTCSY SSDARIWYDY CFMRYENANF FGQADTDAGV ILVNVQAMDN PKAFEKAVGK VMGKATAQAS AAGSAGLGRD KEQYTPFVSI YGLAQCTRDL
201: APLTCAQCLS TALSRFGDYC GAQQGCQINY SSCRVRYEIY PFYFPLAGKG GGLATTDMTK NTKIVVRP

Best Arabidopsis Sequence Match ( AT5G48540.1 )
(BLAST)

001: MKTLVVKCFL LLALVCSCRA ADSIWQLCNT NSNISASSQV SKNIDSLLAT LVSKTPSKGF KTTTSSSYNN KEKVYGLAQC RGDISNTDCS TCIQDAAKKI
101: REVCQNQSDS RILYDFCFLR YSQENFIGKL DTGAGLIYFN VANVTEIDPK KFDNELGALF DKIRSEAVLP KNKGLGKGKT KLTPFVTLNG LVQCTRDLSE
201: LDCAQCFATA VGSFMTTCHN KKGCRVLYSS CYVRYEFYPF YFPLDPAKTG PSVGRISSVH LSP

Arabidopsis Description

CRRSP55Cysteine-rich repeat secretory protein 55 [Source:UniProtKB/Swiss-Prot;Acc:Q9LV60]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.