CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

plastid 2
mitochondrion 2
endoplasmic reticulum 3
plasma membrane 3
extracellular 3
vacuole 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028651_P001	Maize	extracellular	88.04	90.67
TraesCS4B01G205300.1	Wheat	extracellular	73.19	77.1
TraesCS4A01G099000.1	Wheat	extracellular	73.91	75.56
TraesCS4D01G206200.1	Wheat	extracellular	73.55	75.19
Os03t0277600-01	Rice	extracellular	72.1	75.09
HORVU4Hr1G059150.3	Barley	extracellular	71.38	74.62
Os03t0277700-01	Rice	extracellular	70.29	73.21
Os08t0136700-01	Rice	extracellular	60.51	60.95
Os08t0136300-01	Rice	extracellular	60.51	60.73
Os08t0136800-01	Rice	extracellular	59.06	59.06
GSMUA_Achr10P...	Banana	extracellular	52.17	56.03
Os08t0136500-01	Rice	endoplasmic reticulum, vacuole	56.16	55.36
GSMUA_Achr10P...	Banana	extracellular	51.45	55.25
Os03t0312300-01	Rice	golgi	36.59	54.59
GSMUA_Achr10P...	Banana	extracellular	48.55	52.34
CDX86299	Canola	extracellular	40.94	43.3
CDX85345	Canola	plasma membrane	40.94	43.3
Bra037480.1-P	Field mustard	extracellular	40.94	43.3
AT5G48540.1	Thale cress	extracellular	40.22	42.21
VIT_07s0141g00930.t01	Wine grape	extracellular	39.13	41.22
KRG99540	Soybean	extracellular	37.68	40.47
Solyc09g057960.1.1	Tomato	extracellular, nucleus	36.59	38.7
VIT_07s0141g00870.t01	Wine grape	cytosol	21.01	38.41
VIT_07s0141g00840.t01	Wine grape	extracellular	37.32	37.87
EES18898	Sorghum	cytosol, peroxisome, plastid	40.94	37.42
PGSC0003DMT400091649	Potato	extracellular	35.51	36.98
EER91340	Sorghum	extracellular, golgi	22.83	22.74

Protein Annotations

EnsemblPlants:EER92464	EnsemblPlantsGene:SORBI_3001G418200	EntrezGene:8081492	Gene3D:3.30.430.20	InterPro:GNK2	InterPro:GNK2_sf
InterPro:IPR002902	InterPro:IPR038408	PANTHER:PTHR32411	PANTHER:PTHR32411:SF43	PFAM:PF01657	PFscan:PS51473
ProteinID:EER92464	ProteinID:EER92464.1	RefSeq:XP_002465466.1	SEG:seg	SignalP:SignalP-noTM	unigene:Sbi.9432
UniParc:UPI0001A82C7F	UniProt:C5WPD8	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:69919640..69920882

Molecular Weight (calculated)

28936.4 Da

IEP (calculated)

8.051

GRAVY (calculated)

0.066

Length

276 amino acids

Sequence
(BLAST)

001: MGMIHTPYTM KFSTMRCCVL LVSLALLPLG MAADSIGSYC SGSRYAGSNK AVTSINSVLA DLVATASTGG GYATSTAGKG NNIIYGLAQC RGDVSASDCA
101: ACLADAAKQL PSTCSYSSDA RIWYDYCFMR YENADFFGQA DTGAGVILVN VQAMDNPKAF EKAVGKVIGK ATAQASAAGS AGLGRDKDQY TPFVSIYGLA
201: QCTRDLAPLT CAQCLSTAVS RFGDYCGAQQ GCQINYSSCR VRYEIYPFYF PLAGNGGAGG RATTDMTKNT KIIVHP

Best Arabidopsis Sequence Match ( AT5G48540.1 )
(BLAST)

001: MKTLVVKCFL LLALVCSCRA ADSIWQLCNT NSNISASSQV SKNIDSLLAT LVSKTPSKGF KTTTSSSYNN KEKVYGLAQC RGDISNTDCS TCIQDAAKKI
101: REVCQNQSDS RILYDFCFLR YSQENFIGKL DTGAGLIYFN VANVTEIDPK KFDNELGALF DKIRSEAVLP KNKGLGKGKT KLTPFVTLNG LVQCTRDLSE
201: LDCAQCFATA VGSFMTTCHN KKGCRVLYSS CYVRYEFYPF YFPLDPAKTG PSVGRISSVH LSP

Arabidopsis Description

CRRSP55Cysteine-rich repeat secretory protein 55 [Source:UniProtKB/Swiss-Prot;Acc:Q9LV60]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.